RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 CFTRP13569 1480 aa19.39■□□□□ 0.69
TSPAN3-201ENST00000267970 FYCO1Q9BQS8 1478 aa19.39■□□□□ 0.69
TSPAN3-201ENST00000267970 BAG4O95429 457 aaKnown RBP19.39■□□□□ 0.69
TSPAN3-201ENST00000267970 CCDC160A6NGH7 325 aa19.38■□□□□ 0.69
TSPAN3-201ENST00000267970 DNAJC21Q5F1R6 531 aaKnown RBP19.38■□□□□ 0.69
TSPAN3-201ENST00000267970 WAPLQ7Z5K2 1190 aa19.38■□□□□ 0.69
TSPAN3-201ENST00000267970 LIMCH1Q9UPQ0 1083 aa19.38■□□□□ 0.69
TSPAN3-201ENST00000267970 ANKRD30BQ9BXX2 1392 aa19.38■□□□□ 0.69
TSPAN3-201ENST00000267970 GLRX3O76003 335 aaKnown RBP19.38■□□□□ 0.69
TSPAN3-201ENST00000267970 DZIP1Q86YF9 867 aaKnown RBP19.38■□□□□ 0.69
TSPAN3-201ENST00000267970 CADPSQ9ULU8 1353 aa19.38■□□□□ 0.69
TSPAN3-201ENST00000267970 RTEL1-TNFRSF6BF6WH68 1400 aa19.38■□□□□ 0.69
TSPAN3-201ENST00000267970 STX6O43752 255 aa19.38■□□□□ 0.69
TSPAN3-201ENST00000267970 SMIM23A6NLE4 172 aa19.38■□□□□ 0.69
TSPAN3-201ENST00000267970 CETN2P41208 172 aa19.38■□□□□ 0.69
TSPAN3-201ENST00000267970 ECM2O94769 699 aaPredicted RBP19.37■□□□□ 0.69
TSPAN3-201ENST00000267970 ZNF165P49910 485 aa19.37■□□□□ 0.69
TSPAN3-201ENST00000267970 STX1AQ16623 288 aa19.37■□□□□ 0.69
TSPAN3-201ENST00000267970 SLC26A6Q9BXS9 759 aa19.37■□□□□ 0.69
TSPAN3-201ENST00000267970 STAMBPO95630 424 aa19.36■□□□□ 0.69
TSPAN3-201ENST00000267970 DNAAF4Q8WXU2 420 aa19.36■□□□□ 0.69
TSPAN3-201ENST00000267970 PRDM11Q9NQV5 511 aa19.36■□□□□ 0.69
TSPAN3-201ENST00000267970 KIF21BO75037 1637 aa19.36■□□□□ 0.69
TSPAN3-201ENST00000267970 ATP5J2-PTCD1G3V325 749 aa19.36■□□□□ 0.69
TSPAN3-201ENST00000267970 GJC1P36383 396 aa19.36■□□□□ 0.69
TSPAN3-201ENST00000267970 ZNF444Q8N0Y2 327 aaPredicted RBP19.36■□□□□ 0.69
TSPAN3-201ENST00000267970 USP16Q9Y5T5 823 aa19.36■□□□□ 0.69
TSPAN3-201ENST00000267970 CTCFLQ8NI51 663 aaPredicted RBP19.36■□□□□ 0.69
TSPAN3-201ENST00000267970 HOMER2Q9NSB8 354 aa19.36■□□□□ 0.69
TSPAN3-201ENST00000267970 TMEM110-MUSTN1A8MSY1 372 aa19.36■□□□□ 0.69
TSPAN3-201ENST00000267970 ANO6Q4KMQ2 910 aa19.36■□□□□ 0.69
TSPAN3-201ENST00000267970 CCDC194A0A1B0GVG4 234 aa19.35■□□□□ 0.69
TSPAN3-201ENST00000267970 CAPZA3Q96KX2 299 aa19.35■□□□□ 0.69
TSPAN3-201ENST00000267970 KIF2AO00139 706 aaPredicted RBP19.35■□□□□ 0.69
TSPAN3-201ENST00000267970 ARID5AQ03989 594 aa19.35■□□□□ 0.69
TSPAN3-201ENST00000267970 VPS36Q86VN1 386 aa19.35■□□□□ 0.69
TSPAN3-201ENST00000267970 ANXA1P04083 346 aa19.35■□□□□ 0.69
TSPAN3-201ENST00000267970 MICALCLQ6ZW33 695 aa19.35■□□□□ 0.69
TSPAN3-201ENST00000267970 FBLN1P23142 703 aa19.34■□□□□ 0.69
TSPAN3-201ENST00000267970 DNAI1Q9UI46 699 aa19.34■□□□□ 0.69
TSPAN3-201ENST00000267970 ALS2CR12Q96Q35 445 aa19.34■□□□□ 0.69
TSPAN3-201ENST00000267970 ZBTB3Q9H5J0 574 aa19.34■□□□□ 0.69
TSPAN3-201ENST00000267970 CAVIN4Q5BKX8 364 aa19.34■□□□□ 0.69
TSPAN3-201ENST00000267970 TTC12Q9H892 705 aaPredicted RBP19.34■□□□□ 0.69
TSPAN3-201ENST00000267970 FAM83GA6ND36 823 aa19.33■□□□□ 0.69
TSPAN3-201ENST00000267970 PHACTR2O75167 634 aa19.33■□□□□ 0.69
TSPAN3-201ENST00000267970 TMEM67Q5HYA8 995 aa19.33■□□□□ 0.69
TSPAN3-201ENST00000267970 CUX1P39880 1505 aa19.33■□□□□ 0.68
TSPAN3-201ENST00000267970 FERMT2Q96AC1 680 aa19.33■□□□□ 0.68
TSPAN3-201ENST00000267970 SAMM50Q9Y512 469 aa19.33■□□□□ 0.68
TSPAN3-201ENST00000267970 A0A1W2PRG0 241 aa19.32■□□□□ 0.68
TSPAN3-201ENST00000267970 MARCKSP29966 332 aaPredicted RBP19.32■□□□□ 0.68
TSPAN3-201ENST00000267970 TNIP1Q15025 636 aa19.32■□□□□ 0.68
TSPAN3-201ENST00000267970 HSF2BPO75031 334 aa19.32■□□□□ 0.68
TSPAN3-201ENST00000267970 TRIM27P14373 513 aa19.32■□□□□ 0.68
TSPAN3-201ENST00000267970 SYCP3Q8IZU3 236 aa19.32■□□□□ 0.68
TSPAN3-201ENST00000267970 EMILIN1Q9Y6C2 1016 aa19.32■□□□□ 0.68
TSPAN3-201ENST00000267970 FANCD2Q9BXW9 1451 aa19.32■□□□□ 0.68
TSPAN3-201ENST00000267970 FCHSD2O94868 740 aa19.32■□□□□ 0.68
TSPAN3-201ENST00000267970 NME9Q86XW9 330 aa19.32■□□□□ 0.68
TSPAN3-201ENST00000267970 CLGNO14967 610 aa19.31■□□□□ 0.68
TSPAN3-201ENST00000267970 MXRA7P84157 204 aa19.31■□□□□ 0.68
TSPAN3-201ENST00000267970 FAM160A1Q05DH4 1040 aa19.31■□□□□ 0.68
TSPAN3-201ENST00000267970 TMEM266Q2M3C6 531 aa19.31■□□□□ 0.68
TSPAN3-201ENST00000267970 MCM3P25205 808 aa19.31■□□□□ 0.68
TSPAN3-201ENST00000267970 UBASH3AP57075 661 aa19.31■□□□□ 0.68
TSPAN3-201ENST00000267970 CCDC186Q7Z3E2 898 aa19.31■□□□□ 0.68
TSPAN3-201ENST00000267970 SH2B1Q9NRF2 756 aaPredicted RBP19.31■□□□□ 0.68
TSPAN3-201ENST00000267970 KARSQ15046 597 aaKnown RBP19.31■□□□□ 0.68
TSPAN3-201ENST00000267970 TIGD1Q96MW7 591 aa19.31■□□□□ 0.68
TSPAN3-201ENST00000267970 HYPKQ9NX55 129 aa19.31■□□□□ 0.68
TSPAN3-201ENST00000267970 ORC3Q9UBD5 711 aaPredicted RBP19.31■□□□□ 0.68
TSPAN3-201ENST00000267970 TRMT112Q9UI30 125 aaKnown RBP19.3■□□□□ 0.68
TSPAN3-201ENST00000267970 MICALL1Q8N3F8 863 aa19.3■□□□□ 0.68
TSPAN3-201ENST00000267970 PPP1R14CQ8TAE6 165 aa19.3■□□□□ 0.68
TSPAN3-201ENST00000267970 MAP3K2Q9Y2U5 619 aa19.3■□□□□ 0.68
TSPAN3-201ENST00000267970 USP48Q86UV5 1035 aa19.3■□□□□ 0.68
TSPAN3-201ENST00000267970 IQSEC3Q9UPP2 1182 aaPredicted RBP19.3■□□□□ 0.68
TSPAN3-201ENST00000267970 FAM170AA1A519 330 aa19.3■□□□□ 0.68
TSPAN3-201ENST00000267970 N4BP3O15049 544 aa19.3■□□□□ 0.68
TSPAN3-201ENST00000267970 IFIT5Q13325 482 aaKnown RBP19.3■□□□□ 0.68
TSPAN3-201ENST00000267970 ATRIPQ8WXE1 791 aa19.3■□□□□ 0.68
TSPAN3-201ENST00000267970 TRIM47Q96LD4 638 aa19.3■□□□□ 0.68
TSPAN3-201ENST00000267970 DNAJC25Q9H1X3 360 aa19.3■□□□□ 0.68
TSPAN3-201ENST00000267970 AOPEPQ8N6M6 819 aa19.3■□□□□ 0.68
TSPAN3-201ENST00000267970 AKAP2Q9Y2D5 859 aa19.3■□□□□ 0.68
TSPAN3-201ENST00000267970 ARL1P40616 181 aaPredicted RBP19.29■□□□□ 0.68
TSPAN3-201ENST00000267970 RRAGBQ5VZM2 374 aa19.29■□□□□ 0.68
TSPAN3-201ENST00000267970 IQCA1Q86XH1 822 aa19.29■□□□□ 0.68
TSPAN3-201ENST00000267970 FBF1Q8TES7 1133 aa19.29■□□□□ 0.68
TSPAN3-201ENST00000267970 FSD2A1L4K1 749 aa19.29■□□□□ 0.68
TSPAN3-201ENST00000267970 PPP4R3AQ6IN85 833 aa19.29■□□□□ 0.68
TSPAN3-201ENST00000267970 CHST3Q7LGC8 479 aa19.29■□□□□ 0.68
TSPAN3-201ENST00000267970 CATIPQ7Z7H3 387 aa19.29■□□□□ 0.68
TSPAN3-201ENST00000267970 BMS1Q14692 1282 aaKnown RBP19.29■□□□□ 0.68
TSPAN3-201ENST00000267970 MAP3K12Q12852 859 aa19.29■□□□□ 0.68
TSPAN3-201ENST00000267970 AKNAD1Q5T1N1 836 aa19.29■□□□□ 0.68
TSPAN3-201ENST00000267970 CEP112Q8N8E3 955 aa19.29■□□□□ 0.68
TSPAN3-201ENST00000267970 SELENOSQ9BQE4 189 aa19.29■□□□□ 0.68
TSPAN3-201ENST00000267970 DDX19AQ9NUU7 478 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms