RNA–Protein interactions for RNA: ENST00000267163.4

RB1-201, Transcript of RB transcriptional corepressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RB1, Length 4,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-201ENST00000267163 MYCNP04198 464 aaPredicted RBP15.79■□□□□ 0.12
RB1-201ENST00000267163 ATP2B3Q16720 1220 aa15.79■□□□□ 0.12
RB1-201ENST00000267163 TSR1Q2NL82 804 aaKnown RBP15.78■□□□□ 0.12
RB1-201ENST00000267163 SPTY2D1Q68D10 685 aaPredicted RBP15.78■□□□□ 0.12
RB1-201ENST00000267163 JAKMIP1Q96N16 626 aaKnown RBP15.78■□□□□ 0.12
RB1-201ENST00000267163 MSNP26038 577 aaKnown RBP15.78■□□□□ 0.12
RB1-201ENST00000267163 CDK5RAP3Q96JB5 506 aa15.78■□□□□ 0.12
RB1-201ENST00000267163 NLRP1Q9C000 1473 aa15.78■□□□□ 0.12
RB1-201ENST00000267163 TRIM37O94972 964 aa15.78■□□□□ 0.12
RB1-201ENST00000267163 MEIS3Q99687 375 aa15.78■□□□□ 0.12
RB1-201ENST00000267163 KDM5DQ9BY66 1539 aa15.77■□□□□ 0.12
RB1-201ENST00000267163 ALDH1L1O75891 902 aa15.77■□□□□ 0.12
RB1-201ENST00000267163 IL13P35225 146 aa15.77■□□□□ 0.12
RB1-201ENST00000267163 CHMP4BP1P59074 171 aa15.77■□□□□ 0.12
RB1-201ENST00000267163 CCDC96Q2M329 555 aa15.77■□□□□ 0.12
RB1-201ENST00000267163 MSL1Q68DK7 614 aa15.77■□□□□ 0.12
RB1-201ENST00000267163 CCDC87Q9NVE4 849 aa15.77■□□□□ 0.12
RB1-201ENST00000267163 POLR3AO14802 1390 aaPredicted RBP15.77■□□□□ 0.12
RB1-201ENST00000267163 ZFYVE9O95405 1425 aa15.77■□□□□ 0.12
RB1-201ENST00000267163 TSPYL6Q8N831 410 aa15.77■□□□□ 0.11
RB1-201ENST00000267163 FAM89AQ96GI7 184 aa15.77■□□□□ 0.11
RB1-201ENST00000267163 DDX21Q9NR30 783 aaKnown RBP eCLIP15.77■□□□□ 0.11
RB1-201ENST00000267163 ECHDC1Q9NTX5 307 aa15.77■□□□□ 0.11
RB1-201ENST00000267163 U3KPZ7 1027 aaPredicted RBP15.77■□□□□ 0.11
RB1-201ENST00000267163 DDX11L8A8MPP1 907 aa15.76■□□□□ 0.11
RB1-201ENST00000267163 PDCP20941 246 aa15.76■□□□□ 0.11
RB1-201ENST00000267163 ARHGEF12Q9NZN5 1544 aa15.76■□□□□ 0.11
RB1-201ENST00000267163 ROBO2Q9HCK4 1378 aa15.76■□□□□ 0.11
RB1-201ENST00000267163 SLC52A2Q9HAB3 445 aa15.76■□□□□ 0.11
RB1-201ENST00000267163 HCLS1P14317 486 aaPredicted RBP15.76■□□□□ 0.11
RB1-201ENST00000267163 NUCB2P80303 420 aa15.76■□□□□ 0.11
RB1-201ENST00000267163 ARHGEF5Q12774 1597 aa15.75■□□□□ 0.11
RB1-201ENST00000267163 ZNF76P36508 570 aa15.75■□□□□ 0.11
RB1-201ENST00000267163 TNNT3P45378 269 aaPredicted RBP15.75■□□□□ 0.11
RB1-201ENST00000267163 BRINP3Q76B58 766 aa15.75■□□□□ 0.11
RB1-201ENST00000267163 VEZTQ9HBM0 779 aa15.75■□□□□ 0.11
RB1-201ENST00000267163 CABP5Q9NP86 173 aa15.75■□□□□ 0.11
RB1-201ENST00000267163 GJA3Q9Y6H8 435 aa15.75■□□□□ 0.11
RB1-201ENST00000267163 HLA-DOAP06340 250 aa15.75■□□□□ 0.11
RB1-201ENST00000267163 ANKRD20A12PQ8NF67 263 aa15.75■□□□□ 0.11
RB1-201ENST00000267163 ERVK-7P63135 1459 aa15.75■□□□□ 0.11
RB1-201ENST00000267163 KRT18P05783 430 aaKnown RBP15.75■□□□□ 0.11
RB1-201ENST00000267163 KRT32Q14532 448 aa15.75■□□□□ 0.11
RB1-201ENST00000267163 RABEP1Q15276 862 aa15.75■□□□□ 0.11
RB1-201ENST00000267163 ANKRD1Q15327 319 aa15.75■□□□□ 0.11
RB1-201ENST00000267163 ZNF496Q96IT1 587 aaPredicted RBP15.75■□□□□ 0.11
RB1-201ENST00000267163 SDF4Q9BRK5 362 aa15.75■□□□□ 0.11
RB1-201ENST00000267163 UQCRFS1P1P0C7P4 283 aa15.75■□□□□ 0.11
RB1-201ENST00000267163 CEBPZQ03701 1054 aaKnown RBP15.75■□□□□ 0.11
RB1-201ENST00000267163 GSE1Q14687 1217 aa15.75■□□□□ 0.11
RB1-201ENST00000267163 GPR162Q16538 588 aa15.75■□□□□ 0.11
RB1-201ENST00000267163 PHAXQ9H814 394 aaKnown RBP15.75■□□□□ 0.11
RB1-201ENST00000267163 KRT27Q7Z3Y8 459 aa15.74■□□□□ 0.11
RB1-201ENST00000267163 IQCA1Q86XH1 822 aa15.74■□□□□ 0.11
RB1-201ENST00000267163 PRM3Q9NNZ6 103 aa15.74■□□□□ 0.11
RB1-201ENST00000267163 SH3TC1Q8TE82 1336 aa15.74■□□□□ 0.11
RB1-201ENST00000267163 HECW2Q9P2P5 1572 aa15.74■□□□□ 0.11
RB1-201ENST00000267163 EYA3Q99504 573 aa15.74■□□□□ 0.11
RB1-201ENST00000267163 CHMP5Q9NZZ3 219 aa15.74■□□□□ 0.11
RB1-201ENST00000267163 TTF1Q15361 905 aaPredicted RBP15.74■□□□□ 0.11
RB1-201ENST00000267163 IBSPP21815 317 aaPredicted RBP15.74■□□□□ 0.11
RB1-201ENST00000267163 MCM2P49736 904 aa15.73■□□□□ 0.11
RB1-201ENST00000267163 FAM196AQ6ZSG2 479 aa15.73■□□□□ 0.11
RB1-201ENST00000267163 CCDC82Q8N4S0 544 aa15.73■□□□□ 0.11
RB1-201ENST00000267163 CERKQ8TCT0 537 aa15.73■□□□□ 0.11
RB1-201ENST00000267163 H0YIN7 160 aa15.73■□□□□ 0.11
RB1-201ENST00000267163 ZNF804AQ7Z570 1209 aa15.73■□□□□ 0.11
RB1-201ENST00000267163 TPM3P06753 285 aa15.73■□□□□ 0.11
RB1-201ENST00000267163 LMOD1P29536 600 aaPredicted RBP15.73■□□□□ 0.11
RB1-201ENST00000267163 JAG2Q9Y219 1238 aa15.73■□□□□ 0.11
RB1-201ENST00000267163 TXLNAP40222 546 aa15.73■□□□□ 0.11
RB1-201ENST00000267163 ZNF213O14771 459 aa15.72■□□□□ 0.11
RB1-201ENST00000267163 TPM1P09493 284 aa15.72■□□□□ 0.11
RB1-201ENST00000267163 PER1O15534 1290 aaPredicted RBP15.72■□□□□ 0.11
RB1-201ENST00000267163 PARP10Q53GL7 1025 aa15.72■□□□□ 0.11
RB1-201ENST00000267163 PRPF40BQ6NWY9 871 aaKnown RBP15.72■□□□□ 0.11
RB1-201ENST00000267163 IL15P40933 162 aaPredicted RBP15.72■□□□□ 0.11
RB1-201ENST00000267163 STK38Q15208 465 aa15.72■□□□□ 0.11
RB1-201ENST00000267163 RBM17Q96I25 401 aaKnown RBP15.72■□□□□ 0.11
RB1-201ENST00000267163 ZHX3Q9H4I2 956 aa15.72■□□□□ 0.11
RB1-201ENST00000267163 PDRG1Q9NUG6 133 aa15.72■□□□□ 0.11
RB1-201ENST00000267163 NF2P35240 595 aa15.71■□□□□ 0.11
RB1-201ENST00000267163 WWC2Q6AWC2 1192 aa15.71■□□□□ 0.11
RB1-201ENST00000267163 PA2G4Q9UQ80 394 aaKnown RBP15.71■□□□□ 0.11
RB1-201ENST00000267163 TSHZ3Q63HK5 1081 aa15.71■□□□□ 0.11
RB1-201ENST00000267163 SEPT12Q8IYM1 358 aa15.71■□□□□ 0.11
RB1-201ENST00000267163 RHPN1Q8TCX5 695 aa15.71■□□□□ 0.11
RB1-201ENST00000267163 ZMYND15Q9H091 742 aa15.71■□□□□ 0.11
RB1-201ENST00000267163 CYP7A1P22680 504 aa15.71■□□□□ 0.11
RB1-201ENST00000267163 CDKL5O76039 1030 aa15.71■□□□□ 0.1
RB1-201ENST00000267163 CTCFLQ8NI51 663 aaPredicted RBP15.71■□□□□ 0.1
RB1-201ENST00000267163 GOLGA6L3A6NEY3 463 aa15.7■□□□□ 0.1
RB1-201ENST00000267163 PICALMQ13492 652 aa15.7■□□□□ 0.1
RB1-201ENST00000267163 BCS1LQ9Y276 419 aa15.7■□□□□ 0.1
RB1-201ENST00000267163 VAMP4O75379 141 aa15.7■□□□□ 0.1
RB1-201ENST00000267163 GSTO1P78417 241 aa15.7■□□□□ 0.1
RB1-201ENST00000267163 RNF41Q9H4P4 317 aaPredicted RBP15.7■□□□□ 0.1
RB1-201ENST00000267163 SEC63Q9UGP8 760 aaKnown RBP15.7■□□□□ 0.1
RB1-201ENST00000267163 ARHGEF25Q86VW2 580 aa15.7■□□□□ 0.1
RB1-201ENST00000267163 PARD3Q8TEW0 1356 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms