RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 SMARCA5O60264 1052 aaPredicted RBP23.53■■□□□ 1.36
TRIM47-201ENST00000254816 METTL22Q9BUU2 404 aaPredicted RBP23.53■■□□□ 1.36
TRIM47-201ENST00000254816 SLC4A9Q96Q91 983 aa23.52■■□□□ 1.36
TRIM47-201ENST00000254816 NUP188Q5SRE5 1749 aa23.52■■□□□ 1.36
TRIM47-201ENST00000254816 TTLL7Q6ZT98 887 aa23.52■■□□□ 1.36
TRIM47-201ENST00000254816 EXOC6BQ9Y2D4 811 aa23.52■■□□□ 1.36
TRIM47-201ENST00000254816 NEXNQ0ZGT2 675 aa23.5■■□□□ 1.35
TRIM47-201ENST00000254816 PPP1R42Q7Z4L9 355 aa23.5■■□□□ 1.35
TRIM47-201ENST00000254816 C16orf71Q8IYS4 520 aaPredicted RBP23.5■■□□□ 1.35
TRIM47-201ENST00000254816 VSIG10Q8N0Z9 540 aa23.5■■□□□ 1.35
TRIM47-201ENST00000254816 NEURL1BA8MQ27 555 aa23.49■■□□□ 1.35
TRIM47-201ENST00000254816 ZNF330Q9Y3S2 320 aaPredicted RBP23.49■■□□□ 1.35
TRIM47-201ENST00000254816 GRM8O00222 908 aa23.49■■□□□ 1.35
TRIM47-201ENST00000254816 PLBD2Q8NHP8 589 aa23.49■■□□□ 1.35
TRIM47-201ENST00000254816 TJP1Q07157 1748 aa23.49■■□□□ 1.35
TRIM47-201ENST00000254816 ATP5J2-PTCD1G3V325 749 aa23.48■■□□□ 1.35
TRIM47-201ENST00000254816 TEX13AQ9BXU3 409 aaPredicted RBP23.47■■□□□ 1.35
TRIM47-201ENST00000254816 SRGAP3O43295 1099 aa23.47■■□□□ 1.35
TRIM47-201ENST00000254816 SSH3Q8TE77 659 aa23.47■■□□□ 1.35
TRIM47-201ENST00000254816 ZBTB3Q9H5J0 574 aa23.47■■□□□ 1.35
TRIM47-201ENST00000254816 KCNQ2O43526 872 aa23.46■■□□□ 1.35
TRIM47-201ENST00000254816 GCKRQ14397 625 aa23.46■■□□□ 1.35
TRIM47-201ENST00000254816 OTUD7AQ8TE49 926 aaPredicted RBP23.46■■□□□ 1.35
TRIM47-201ENST00000254816 JARID2Q92833 1246 aaPredicted RBP23.46■■□□□ 1.35
TRIM47-201ENST00000254816 SUCLG2Q96I99 432 aa23.46■■□□□ 1.35
TRIM47-201ENST00000254816 AFF2P51816 1311 aa23.46■■□□□ 1.35
TRIM47-201ENST00000254816 SEC24BO95487 1268 aa23.45■■□□□ 1.35
TRIM47-201ENST00000254816 STARD3NLO95772 234 aa23.45■■□□□ 1.34
TRIM47-201ENST00000254816 UTYO14607 1347 aa23.45■■□□□ 1.34
TRIM47-201ENST00000254816 POLA2Q14181 598 aa23.44■■□□□ 1.34
TRIM47-201ENST00000254816 KAZALD1Q96I82 304 aa23.44■■□□□ 1.34
TRIM47-201ENST00000254816 PLEKHM2Q8IWE5 1019 aa23.44■■□□□ 1.34
TRIM47-201ENST00000254816 THSD7AQ9UPZ6 1657 aa23.43■■□□□ 1.34
TRIM47-201ENST00000254816 CYP19A1P11511 503 aaPredicted RBP23.43■■□□□ 1.34
TRIM47-201ENST00000254816 IBTKQ9P2D0 1353 aaPredicted RBP23.42■■□□□ 1.34
TRIM47-201ENST00000254816 BICC1Q9H694 974 aaKnown RBP23.42■■□□□ 1.34
TRIM47-201ENST00000254816 SURF6O75683 361 aaKnown RBP23.41■■□□□ 1.34
TRIM47-201ENST00000254816 FAM182BQ5T319 152 aa23.41■■□□□ 1.34
TRIM47-201ENST00000254816 ARXQ96QS3 562 aa23.41■■□□□ 1.34
TRIM47-201ENST00000254816 GJD4Q96KN9 370 aaPredicted RBP23.4■■□□□ 1.34
TRIM47-201ENST00000254816 LRRCC1Q9C099 1032 aa23.4■■□□□ 1.34
TRIM47-201ENST00000254816 ZBTB1Q9Y2K1 713 aa23.4■■□□□ 1.34
TRIM47-201ENST00000254816 DDRGK1Q96HY6 314 aa23.39■■□□□ 1.34
TRIM47-201ENST00000254816 MTX1Q13505 466 aa23.39■■□□□ 1.33
TRIM47-201ENST00000254816 UBE3BQ7Z3V4 1068 aa23.39■■□□□ 1.33
TRIM47-201ENST00000254816 A0A087WZG4 1122 aa23.38■■□□□ 1.33
TRIM47-201ENST00000254816 ATP6V1AP38606 617 aa23.38■■□□□ 1.33
TRIM47-201ENST00000254816 EPHA10Q5JZY3 1008 aa23.38■■□□□ 1.33
TRIM47-201ENST00000254816 HDAC5Q9UQL6 1122 aa23.38■■□□□ 1.33
TRIM47-201ENST00000254816 BMP2KLQ5H9B9 411 aa23.38■■□□□ 1.33
TRIM47-201ENST00000254816 PTF1AQ7RTS3 328 aa23.38■■□□□ 1.33
TRIM47-201ENST00000254816 RTL5Q5HYW3 569 aaPredicted RBP23.37■■□□□ 1.33
TRIM47-201ENST00000254816 PALLDQ8WX93 1383 aa23.37■■□□□ 1.33
TRIM47-201ENST00000254816 LOC102724428A0A0B4J2F2 783 aa23.36■■□□□ 1.33
TRIM47-201ENST00000254816 GSPT1P15170 499 aaKnown RBP23.36■■□□□ 1.33
TRIM47-201ENST00000254816 SIK1P57059 783 aa23.36■■□□□ 1.33
TRIM47-201ENST00000254816 IL1RAPL2Q9NP60 686 aa23.36■■□□□ 1.33
TRIM47-201ENST00000254816 PA2G4Q9UQ80 394 aaKnown RBP23.36■■□□□ 1.33
TRIM47-201ENST00000254816 SLC4A3P48751 1232 aa23.36■■□□□ 1.33
TRIM47-201ENST00000254816 KIF6Q6ZMV9 814 aa23.36■■□□□ 1.33
TRIM47-201ENST00000254816 MYH14Q7Z406 1995 aaKnown RBP23.35■■□□□ 1.33
TRIM47-201ENST00000254816 ATRNO75882 1429 aa23.35■■□□□ 1.33
TRIM47-201ENST00000254816 ITPK1Q13572 414 aa23.35■■□□□ 1.33
TRIM47-201ENST00000254816 CWC25Q9NXE8 425 aaPredicted RBP23.35■■□□□ 1.33
TRIM47-201ENST00000254816 TTC22Q5TAA0 569 aa23.34■■□□□ 1.33
TRIM47-201ENST00000254816 NUP98P52948 1817 aa23.34■■□□□ 1.33
TRIM47-201ENST00000254816 CASP7P55210 303 aa23.34■■□□□ 1.33
TRIM47-201ENST00000254816 TRPC5Q9UL62 973 aaPredicted RBP23.34■■□□□ 1.33
TRIM47-201ENST00000254816 BTAF1O14981 1849 aa23.34■■□□□ 1.33
TRIM47-201ENST00000254816 RAB11FIP3O75154 756 aa23.33■■□□□ 1.33
TRIM47-201ENST00000254816 TSHZ3Q63HK5 1081 aa23.33■■□□□ 1.33
TRIM47-201ENST00000254816 RHPN1Q8TCX5 695 aa23.33■■□□□ 1.33
TRIM47-201ENST00000254816 HLFQ16534 295 aa23.33■■□□□ 1.32
TRIM47-201ENST00000254816 MAP3K15Q6ZN16 1313 aa23.32■■□□□ 1.32
TRIM47-201ENST00000254816 TCIRG1Q13488 830 aa23.32■■□□□ 1.32
TRIM47-201ENST00000254816 ANKRD36CQ5JPF3 1778 aa23.32■■□□□ 1.32
TRIM47-201ENST00000254816 H7C1W4 665 aa23.31■■□□□ 1.32
TRIM47-201ENST00000254816 OS9Q13438 667 aaPredicted RBP23.31■■□□□ 1.32
TRIM47-201ENST00000254816 INTS5Q6P9B9 1019 aaKnown RBP23.31■■□□□ 1.32
TRIM47-201ENST00000254816 KLHDC4Q8TBB5 520 aa23.31■■□□□ 1.32
TRIM47-201ENST00000254816 COL5A3P25940 1745 aaPredicted RBP23.31■■□□□ 1.32
TRIM47-201ENST00000254816 SBF2Q86WG5 1849 aa23.31■■□□□ 1.32
TRIM47-201ENST00000254816 CRKLP46109 303 aaKnown RBP23.31■■□□□ 1.32
TRIM47-201ENST00000254816 PDE1AP54750 535 aa23.31■■□□□ 1.32
TRIM47-201ENST00000254816 CCDC191Q8NCU4 936 aa23.31■■□□□ 1.32
TRIM47-201ENST00000254816 SMARCC1Q92922 1105 aaPredicted RBP23.31■■□□□ 1.32
TRIM47-201ENST00000254816 ISCA1Q9BUE6 129 aa23.31■■□□□ 1.32
TRIM47-201ENST00000254816 QTRT2Q9H974 415 aaKnown RBP23.31■■□□□ 1.32
TRIM47-201ENST00000254816 TBC1D2BQ9UPU7 963 aa23.31■■□□□ 1.32
TRIM47-201ENST00000254816 SALL3Q9BXA9 1300 aa23.31■■□□□ 1.32
TRIM47-201ENST00000254816 CICQ96RK0 1608 aaPredicted RBP23.31■■□□□ 1.32
TRIM47-201ENST00000254816 KCNQ4P56696 695 aa23.3■■□□□ 1.32
TRIM47-201ENST00000254816 NHSQ6T4R5 1651 aa23.3■■□□□ 1.32
TRIM47-201ENST00000254816 IL6STP40189 918 aaPredicted RBP23.3■■□□□ 1.32
TRIM47-201ENST00000254816 NUTM1Q86Y26 1132 aa23.3■■□□□ 1.32
TRIM47-201ENST00000254816 KIF1BPQ96EK5 621 aa23.3■■□□□ 1.32
TRIM47-201ENST00000254816 CCDC87Q9NVE4 849 aa23.3■■□□□ 1.32
TRIM47-201ENST00000254816 TUBGCP6Q96RT7 1819 aa23.3■■□□□ 1.32
TRIM47-201ENST00000254816 SEPT12Q8IYM1 358 aa23.29■■□□□ 1.32
TRIM47-201ENST00000254816 RREB1Q92766 1687 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms