RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 NEXNQ0ZGT2 675 aa26.44■■□□□ 1.82
CLN6-201ENST00000249806 CLASRPQ8N2M8 674 aaKnown RBP26.44■■□□□ 1.82
CLN6-201ENST00000249806 ANKRD13DQ6ZTN6 518 aa26.43■■□□□ 1.82
CLN6-201ENST00000249806 PLEKHG2Q9H7P9 1386 aa26.43■■□□□ 1.82
CLN6-201ENST00000249806 METTL22Q9BUU2 404 aaPredicted RBP26.43■■□□□ 1.82
CLN6-201ENST00000249806 GZF1Q9H116 711 aaPredicted RBP26.43■■□□□ 1.82
CLN6-201ENST00000249806 SSFA2P28290 1259 aa26.42■■□□□ 1.82
CLN6-201ENST00000249806 NEK4P51957 841 aa26.42■■□□□ 1.82
CLN6-201ENST00000249806 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.42■■□□□ 1.82
CLN6-201ENST00000249806 DDX11L8A8MPP1 907 aa26.42■■□□□ 1.82
CLN6-201ENST00000249806 GCKRQ14397 625 aa26.42■■□□□ 1.82
CLN6-201ENST00000249806 ZCRB1Q8TBF4 217 aaKnown RBP26.42■■□□□ 1.82
CLN6-201ENST00000249806 CNTROBQ8N137 903 aa26.41■■□□□ 1.82
CLN6-201ENST00000249806 JARID2Q92833 1246 aaPredicted RBP26.41■■□□□ 1.82
CLN6-201ENST00000249806 USP42Q9H9J4 1324 aaKnown RBP26.4■■□□□ 1.82
CLN6-201ENST00000249806 MCCP23508 829 aa26.4■■□□□ 1.82
CLN6-201ENST00000249806 TTC41PQ6P2S7 1318 aa26.4■■□□□ 1.82
CLN6-201ENST00000249806 SASH1O94885 1247 aa26.39■■□□□ 1.82
CLN6-201ENST00000249806 ERC1Q8IUD2 1116 aa26.39■■□□□ 1.82
CLN6-201ENST00000249806 GBP4Q96PP9 640 aa26.39■■□□□ 1.82
CLN6-201ENST00000249806 EPHA10Q5JZY3 1008 aa26.39■■□□□ 1.81
CLN6-201ENST00000249806 ZGPATQ8N5A5 531 aaKnown RBP26.39■■□□□ 1.81
CLN6-201ENST00000249806 KLHDC4Q8TBB5 520 aa26.39■■□□□ 1.81
CLN6-201ENST00000249806 GLRX3O76003 335 aaKnown RBP26.38■■□□□ 1.81
CLN6-201ENST00000249806 COL5A2P05997 1499 aaPredicted RBP26.38■■□□□ 1.81
CLN6-201ENST00000249806 IFIT2P09913 472 aaKnown RBP26.38■■□□□ 1.81
CLN6-201ENST00000249806 SIL1Q9H173 461 aa26.38■■□□□ 1.81
CLN6-201ENST00000249806 PCDH11XQ9BZA7 1347 aa26.37■■□□□ 1.81
CLN6-201ENST00000249806 PCDH11YQ9BZA8 1340 aa26.37■■□□□ 1.81
CLN6-201ENST00000249806 G3BP1Q13283 466 aaKnown RBP eCLIP26.37■■□□□ 1.81
CLN6-201ENST00000249806 AACSQ86V21 672 aa26.37■■□□□ 1.81
CLN6-201ENST00000249806 STRN4Q9NRL3 753 aa26.37■■□□□ 1.81
CLN6-201ENST00000249806 BRPF3Q9ULD4 1205 aa26.37■■□□□ 1.81
CLN6-201ENST00000249806 ECHDC1Q9NTX5 307 aa26.37■■□□□ 1.81
CLN6-201ENST00000249806 SGSM2O43147 1006 aa26.36■■□□□ 1.81
CLN6-201ENST00000249806 ANAPC15P60006 121 aa26.36■■□□□ 1.81
CLN6-201ENST00000249806 ATP5J2-PTCD1G3V325 749 aa26.35■■□□□ 1.81
CLN6-201ENST00000249806 PTCD1O75127 700 aaKnown RBP26.35■■□□□ 1.81
CLN6-201ENST00000249806 PKP1Q13835 747 aa26.35■■□□□ 1.81
CLN6-201ENST00000249806 CWC27Q6UX04 472 aaKnown RBP26.35■■□□□ 1.81
CLN6-201ENST00000249806 DDX54Q8TDD1 881 aaKnown RBP26.35■■□□□ 1.81
CLN6-201ENST00000249806 EAF2Q96CJ1 260 aaPredicted RBP26.35■■□□□ 1.81
CLN6-201ENST00000249806 PARP4Q9UKK3 1724 aaKnown RBP26.34■■□□□ 1.81
CLN6-201ENST00000249806 IL2RBP14784 551 aa26.34■■□□□ 1.81
CLN6-201ENST00000249806 HSPA4P34932 840 aa26.33■■□□□ 1.81
CLN6-201ENST00000249806 TMX3Q96JJ7 454 aa26.33■■□□□ 1.81
CLN6-201ENST00000249806 UPF3BQ9BZI7 483 aaKnown RBP26.33■■□□□ 1.81
CLN6-201ENST00000249806 CCDC8Q9H0W5 538 aaPredicted RBP26.33■■□□□ 1.81
CLN6-201ENST00000249806 GLI3P10071 1580 aa26.33■■□□□ 1.81
CLN6-201ENST00000249806 NBPF26B4DH59 902 aa26.33■■□□□ 1.8
CLN6-201ENST00000249806 NBPF14Q5TI25 921 aa26.33■■□□□ 1.8
CLN6-201ENST00000249806 NBPF10Q6P3W6 841 aaKnown RBP26.33■■□□□ 1.8
CLN6-201ENST00000249806 NBPF15Q8N660 670 aa26.33■■□□□ 1.8
CLN6-201ENST00000249806 IL27Q8NEV9 243 aa26.33■■□□□ 1.8
CLN6-201ENST00000249806 CARD10Q9BWT7 1032 aa26.33■■□□□ 1.8
CLN6-201ENST00000249806 CWC22Q9HCG8 908 aaKnown RBP26.32■■□□□ 1.8
CLN6-201ENST00000249806 ERVV-2B6SEH9 535 aa26.31■■□□□ 1.8
CLN6-201ENST00000249806 EVA1CP58658 441 aa26.31■■□□□ 1.8
CLN6-201ENST00000249806 NOL8Q76FK4 1167 aaKnown RBP26.31■■□□□ 1.8
CLN6-201ENST00000249806 UBE3BQ7Z3V4 1068 aa26.31■■□□□ 1.8
CLN6-201ENST00000249806 GPATCH3Q96I76 525 aa26.31■■□□□ 1.8
CLN6-201ENST00000249806 TLR7Q9NYK1 1049 aaKnown RBP26.31■■□□□ 1.8
CLN6-201ENST00000249806 NUCB2P80303 420 aa26.3■■□□□ 1.8
CLN6-201ENST00000249806 IL17RAQ96F46 866 aa26.3■■□□□ 1.8
CLN6-201ENST00000249806 LSG1Q9H089 658 aaKnown RBP26.3■■□□□ 1.8
CLN6-201ENST00000249806 AFDNP55196 1824 aaKnown RBP26.3■■□□□ 1.8
CLN6-201ENST00000249806 RAD50Q92878 1312 aa26.3■■□□□ 1.8
CLN6-201ENST00000249806 EPB41L2O43491 1005 aaKnown RBP26.3■■□□□ 1.8
CLN6-201ENST00000249806 CYP2E1P05181 493 aaPredicted RBP26.3■■□□□ 1.8
CLN6-201ENST00000249806 CLEC17AQ6ZS10 378 aa26.3■■□□□ 1.8
CLN6-201ENST00000249806 PLBD2Q8NHP8 589 aa26.3■■□□□ 1.8
CLN6-201ENST00000249806 ARXQ96QS3 562 aa26.3■■□□□ 1.8
CLN6-201ENST00000249806 ARFGEF2Q9Y6D5 1785 aa26.29■■□□□ 1.8
CLN6-201ENST00000249806 BAG4O95429 457 aaKnown RBP26.29■■□□□ 1.8
CLN6-201ENST00000249806 NKX1-1Q15270 411 aaPredicted RBP26.29■■□□□ 1.8
CLN6-201ENST00000249806 ABCA3Q99758 1704 aa26.29■■□□□ 1.8
CLN6-201ENST00000249806 A0A087WZG4 1122 aa26.29■■□□□ 1.8
CLN6-201ENST00000249806 A1BGP04217 495 aa26.29■■□□□ 1.8
CLN6-201ENST00000249806 DIAPH3Q9NSV4 1193 aa26.28■■□□□ 1.8
CLN6-201ENST00000249806 MCM2P49736 904 aa26.27■■□□□ 1.8
CLN6-201ENST00000249806 LAMB4A4D0S4 1761 aa26.27■■□□□ 1.8
CLN6-201ENST00000249806 TTLL7Q6ZT98 887 aa26.27■■□□□ 1.8
CLN6-201ENST00000249806 KIAA1211Q6ZU35 1233 aa26.27■■□□□ 1.8
CLN6-201ENST00000249806 RFX5P48382 616 aaPredicted RBP26.26■■□□□ 1.79
CLN6-201ENST00000249806 RASEFQ8IZ41 740 aa26.26■■□□□ 1.79
CLN6-201ENST00000249806 EVI5LQ96CN4 794 aa26.26■■□□□ 1.79
CLN6-201ENST00000249806 ZDHHC9Q9Y397 364 aa26.26■■□□□ 1.79
CLN6-201ENST00000249806 SNX14Q9Y5W7 946 aa26.26■■□□□ 1.79
CLN6-201ENST00000249806 PTPN12Q05209 780 aaKnown RBP26.25■■□□□ 1.79
CLN6-201ENST00000249806 COPRSQ9NQ92 184 aa26.24■■□□□ 1.79
CLN6-201ENST00000249806 CASP7P55210 303 aa26.24■■□□□ 1.79
CLN6-201ENST00000249806 RABL6Q3YEC7 729 aaPredicted RBP26.24■■□□□ 1.79
CLN6-201ENST00000249806 BOLA2Q9H3K6 86 aa26.24■■□□□ 1.79
CLN6-201ENST00000249806 SHANK3Q9BYB0 1731 aa26.23■■□□□ 1.79
CLN6-201ENST00000249806 GOLGA6L3A6NEY3 463 aa26.23■■□□□ 1.79
CLN6-201ENST00000249806 PTH1RQ03431 593 aa26.23■■□□□ 1.79
CLN6-201ENST00000249806 UBR2Q8IWV8 1755 aa26.23■■□□□ 1.79
CLN6-201ENST00000249806 FSD2A1L4K1 749 aa26.23■■□□□ 1.79
CLN6-201ENST00000249806 CUL4AQ13619 759 aa26.23■■□□□ 1.79
CLN6-201ENST00000249806 RUFY2Q8WXA3 655 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms