RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 UTYO14607 1347 aa23.73■■□□□ 1.39
CDC42EP1-201ENST00000249014 RAD50Q92878 1312 aa23.73■■□□□ 1.39
CDC42EP1-201ENST00000249014 CLASRPQ8N2M8 674 aaKnown RBP23.72■■□□□ 1.39
CDC42EP1-201ENST00000249014 CABLES1Q8TDN4 633 aa23.72■■□□□ 1.39
CDC42EP1-201ENST00000249014 GLRX3O76003 335 aaKnown RBP23.71■■□□□ 1.39
CDC42EP1-201ENST00000249014 DDX58O95786 925 aaKnown RBP23.71■■□□□ 1.39
CDC42EP1-201ENST00000249014 TATP17735 454 aaPredicted RBP23.71■■□□□ 1.39
CDC42EP1-201ENST00000249014 CHAMP1Q96JM3 812 aa23.71■■□□□ 1.39
CDC42EP1-201ENST00000249014 LSG1Q9H089 658 aaKnown RBP23.71■■□□□ 1.39
CDC42EP1-201ENST00000249014 IGKV5-2P06315 115 aa23.71■■□□□ 1.39
CDC42EP1-201ENST00000249014 CWC27Q6UX04 472 aaKnown RBP23.7■■□□□ 1.38
CDC42EP1-201ENST00000249014 BICC1Q9H694 974 aaKnown RBP23.7■■□□□ 1.38
CDC42EP1-201ENST00000249014 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.7■■□□□ 1.38
CDC42EP1-201ENST00000249014 SPG7Q9UQ90 795 aa23.69■■□□□ 1.38
CDC42EP1-201ENST00000249014 HDAC5Q9UQL6 1122 aa23.69■■□□□ 1.38
CDC42EP1-201ENST00000249014 MYL6BP14649 208 aa23.69■■□□□ 1.38
CDC42EP1-201ENST00000249014 RRAGDQ9NQL2 400 aaPredicted RBP23.69■■□□□ 1.38
CDC42EP1-201ENST00000249014 CHRNA2Q15822 529 aa23.68■■□□□ 1.38
CDC42EP1-201ENST00000249014 RIC3Q7Z5B4 369 aa23.68■■□□□ 1.38
CDC42EP1-201ENST00000249014 ERC1Q8IUD2 1116 aa23.68■■□□□ 1.38
CDC42EP1-201ENST00000249014 INTS4Q96HW7 963 aaKnown RBP23.68■■□□□ 1.38
CDC42EP1-201ENST00000249014 ZNF496Q96IT1 587 aaPredicted RBP23.68■■□□□ 1.38
CDC42EP1-201ENST00000249014 ECHDC1Q9NTX5 307 aa23.68■■□□□ 1.38
CDC42EP1-201ENST00000249014 FOXD4L5Q5VV16 416 aaPredicted RBP23.68■■□□□ 1.38
CDC42EP1-201ENST00000249014 FOXD4L4Q8WXT5 416 aaPredicted RBP23.68■■□□□ 1.38
CDC42EP1-201ENST00000249014 SNX14Q9Y5W7 946 aa23.68■■□□□ 1.38
CDC42EP1-201ENST00000249014 PRPF40AO75400 957 aaKnown RBP23.67■■□□□ 1.38
CDC42EP1-201ENST00000249014 SASH1O94885 1247 aa23.67■■□□□ 1.38
CDC42EP1-201ENST00000249014 CSB-PGBD3P0DP91 1061 aa23.67■■□□□ 1.38
CDC42EP1-201ENST00000249014 IFNL2Q8IZJ0 200 aa23.67■■□□□ 1.38
CDC42EP1-201ENST00000249014 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.67■■□□□ 1.38
CDC42EP1-201ENST00000249014 DCCP43146 1447 aa23.67■■□□□ 1.38
CDC42EP1-201ENST00000249014 IFIT2P09913 472 aaKnown RBP23.67■■□□□ 1.38
CDC42EP1-201ENST00000249014 RASEFQ8IZ41 740 aa23.67■■□□□ 1.38
CDC42EP1-201ENST00000249014 ABCC6O95255 1503 aa23.66■■□□□ 1.38
CDC42EP1-201ENST00000249014 BRD1O95696 1058 aa23.66■■□□□ 1.38
CDC42EP1-201ENST00000249014 AACSQ86V21 672 aa23.66■■□□□ 1.38
CDC42EP1-201ENST00000249014 XAGE3Q8WTP9 111 aa23.66■■□□□ 1.38
CDC42EP1-201ENST00000249014 CYP27B1O15528 508 aa23.65■■□□□ 1.38
CDC42EP1-201ENST00000249014 LARP1Q6PKG0 1096 aaKnown RBP23.65■■□□□ 1.38
CDC42EP1-201ENST00000249014 COPS6Q7L5N1 327 aa23.65■■□□□ 1.38
CDC42EP1-201ENST00000249014 TNS3Q68CZ2 1445 aa23.65■■□□□ 1.38
CDC42EP1-201ENST00000249014 NEURL1BA8MQ27 555 aa23.65■■□□□ 1.38
CDC42EP1-201ENST00000249014 CAVIN1Q6NZI2 390 aaKnown RBP23.65■■□□□ 1.38
CDC42EP1-201ENST00000249014 PKD1L3Q7Z443 1732 aa23.64■■□□□ 1.38
CDC42EP1-201ENST00000249014 MRC1P22897 1456 aa23.64■■□□□ 1.38
CDC42EP1-201ENST00000249014 NCLP19338 710 aaKnown RBP23.64■■□□□ 1.38
CDC42EP1-201ENST00000249014 LRP10Q7Z4F1 713 aa23.64■■□□□ 1.38
CDC42EP1-201ENST00000249014 GPT2Q8TD30 523 aa23.64■■□□□ 1.38
CDC42EP1-201ENST00000249014 KIAA1211Q6ZU35 1233 aa23.64■■□□□ 1.37
CDC42EP1-201ENST00000249014 EAF2Q96CJ1 260 aaPredicted RBP23.64■■□□□ 1.37
CDC42EP1-201ENST00000249014 DIAPH3Q9NSV4 1193 aa23.64■■□□□ 1.37
CDC42EP1-201ENST00000249014 USP16Q9Y5T5 823 aa23.64■■□□□ 1.37
CDC42EP1-201ENST00000249014 PIP4K2AP48426 406 aaPredicted RBP23.63■■□□□ 1.37
CDC42EP1-201ENST00000249014 GPATCH3Q96I76 525 aa23.63■■□□□ 1.37
CDC42EP1-201ENST00000249014 TTC14Q96N46 770 aa23.63■■□□□ 1.37
CDC42EP1-201ENST00000249014 GCKRQ14397 625 aa23.62■■□□□ 1.37
CDC42EP1-201ENST00000249014 DCAF5Q96JK2 942 aa23.62■■□□□ 1.37
CDC42EP1-201ENST00000249014 NEXNQ0ZGT2 675 aa23.62■■□□□ 1.37
CDC42EP1-201ENST00000249014 G3BP1Q13283 466 aaKnown RBP eCLIP23.62■■□□□ 1.37
CDC42EP1-201ENST00000249014 ZSCAN23Q3MJ62 389 aa23.62■■□□□ 1.37
CDC42EP1-201ENST00000249014 MYD88Q99836 296 aa23.62■■□□□ 1.37
CDC42EP1-201ENST00000249014 METTL22Q9BUU2 404 aaPredicted RBP23.62■■□□□ 1.37
CDC42EP1-201ENST00000249014 ZNF445P59923 1031 aa23.61■■□□□ 1.37
CDC42EP1-201ENST00000249014 PTH1RQ03431 593 aa23.61■■□□□ 1.37
CDC42EP1-201ENST00000249014 EPHA10Q5JZY3 1008 aa23.61■■□□□ 1.37
CDC42EP1-201ENST00000249014 KLHDC4Q8TBB5 520 aa23.61■■□□□ 1.37
CDC42EP1-201ENST00000249014 SIL1Q9H173 461 aa23.61■■□□□ 1.37
CDC42EP1-201ENST00000249014 CCDC8Q9H0W5 538 aaPredicted RBP23.61■■□□□ 1.37
CDC42EP1-201ENST00000249014 TLR7Q9NYK1 1049 aaKnown RBP23.61■■□□□ 1.37
CDC42EP1-201ENST00000249014 SNRPA1P09661 255 aaKnown RBP23.6■■□□□ 1.37
CDC42EP1-201ENST00000249014 CADPS2Q86UW7 1296 aa23.6■■□□□ 1.37
CDC42EP1-201ENST00000249014 RUFY2Q8WXA3 655 aa23.6■■□□□ 1.37
CDC42EP1-201ENST00000249014 EVI5LQ96CN4 794 aa23.6■■□□□ 1.37
CDC42EP1-201ENST00000249014 SPATA31A3Q5VYP0 1347 aa23.6■■□□□ 1.37
CDC42EP1-201ENST00000249014 TTC5Q8N0Z6 440 aa23.59■■□□□ 1.37
CDC42EP1-201ENST00000249014 AFDNP55196 1824 aaKnown RBP23.59■■□□□ 1.37
CDC42EP1-201ENST00000249014 AK2P54819 239 aa23.59■■□□□ 1.37
CDC42EP1-201ENST00000249014 ANKRD13DQ6ZTN6 518 aa23.59■■□□□ 1.37
CDC42EP1-201ENST00000249014 RBM27Q9P2N5 1060 aaKnown RBP23.59■■□□□ 1.37
CDC42EP1-201ENST00000249014 NSFL1CQ9UNZ2 370 aaKnown RBP23.59■■□□□ 1.37
CDC42EP1-201ENST00000249014 GLI3P10071 1580 aa23.58■■□□□ 1.37
CDC42EP1-201ENST00000249014 LARP6Q9BRS8 491 aaKnown RBP23.58■■□□□ 1.36
CDC42EP1-201ENST00000249014 ARFGEF2Q9Y6D5 1785 aa23.58■■□□□ 1.36
CDC42EP1-201ENST00000249014 CPA1P15085 419 aa23.57■■□□□ 1.36
CDC42EP1-201ENST00000249014 RUFY3Q7L099 469 aa23.57■■□□□ 1.36
CDC42EP1-201ENST00000249014 JARID2Q92833 1246 aaPredicted RBP23.57■■□□□ 1.36
CDC42EP1-201ENST00000249014 FMNL2Q96PY5 1086 aa23.57■■□□□ 1.36
CDC42EP1-201ENST00000249014 PLEKHG2Q9H7P9 1386 aa23.57■■□□□ 1.36
CDC42EP1-201ENST00000249014 CPDO75976 1380 aa23.56■■□□□ 1.36
CDC42EP1-201ENST00000249014 CASTP20810 708 aaKnown RBP23.55■■□□□ 1.36
CDC42EP1-201ENST00000249014 NASPP49321 788 aaPredicted RBP23.55■■□□□ 1.36
CDC42EP1-201ENST00000249014 ADCK5Q3MIX3 580 aa23.55■■□□□ 1.36
CDC42EP1-201ENST00000249014 PRPF40BQ6NWY9 871 aaKnown RBP23.55■■□□□ 1.36
CDC42EP1-201ENST00000249014 FAM227BQ96M60 508 aa23.55■■□□□ 1.36
CDC42EP1-201ENST00000249014 XIRP1Q702N8 1843 aaKnown RBP23.55■■□□□ 1.36
CDC42EP1-201ENST00000249014 TMEM63CQ9P1W3 806 aa23.55■■□□□ 1.36
CDC42EP1-201ENST00000249014 RPAP1Q9BWH6 1393 aaPredicted RBP23.55■■□□□ 1.36
CDC42EP1-201ENST00000249014 LAMB4A4D0S4 1761 aa23.54■■□□□ 1.36
CDC42EP1-201ENST00000249014 CABP4P57796 275 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms