RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 SPG7Q9UQ90 795 aa21.1■□□□□ 0.97
LRFN3-201ENST00000246529 XAGE3Q8WTP9 111 aa21.1■□□□□ 0.97
LRFN3-201ENST00000246529 LMBRD1Q9NUN5 540 aa21.09■□□□□ 0.97
LRFN3-201ENST00000246529 USP42Q9H9J4 1324 aaKnown RBP21.08■□□□□ 0.97
LRFN3-201ENST00000246529 ADAMTS7Q9UKP4 1686 aa21.08■□□□□ 0.97
LRFN3-201ENST00000246529 CYP27B1O15528 508 aa21.08■□□□□ 0.97
LRFN3-201ENST00000246529 NCLP19338 710 aaKnown RBP21.08■□□□□ 0.97
LRFN3-201ENST00000246529 KLHL40Q2TBA0 621 aa21.08■□□□□ 0.97
LRFN3-201ENST00000246529 COPS6Q7L5N1 327 aa21.08■□□□□ 0.97
LRFN3-201ENST00000246529 KLHDC4Q8TBB5 520 aa21.08■□□□□ 0.97
LRFN3-201ENST00000246529 JARID2Q92833 1246 aaPredicted RBP21.08■□□□□ 0.97
LRFN3-201ENST00000246529 LSG1Q9H089 658 aaKnown RBP21.08■□□□□ 0.97
LRFN3-201ENST00000246529 SIL1Q9H173 461 aa21.08■□□□□ 0.97
LRFN3-201ENST00000246529 USP16Q9Y5T5 823 aa21.08■□□□□ 0.97
LRFN3-201ENST00000246529 GLRX3O76003 335 aaKnown RBP21.08■□□□□ 0.96
LRFN3-201ENST00000246529 MCM2P49736 904 aa21.08■□□□□ 0.96
LRFN3-201ENST00000246529 AACSQ86V21 672 aa21.08■□□□□ 0.96
LRFN3-201ENST00000246529 IFNL2Q8IZJ0 200 aa21.08■□□□□ 0.96
LRFN3-201ENST00000246529 TTC41PQ6P2S7 1318 aa21.07■□□□□ 0.96
LRFN3-201ENST00000246529 RAD50Q92878 1312 aa21.07■□□□□ 0.96
LRFN3-201ENST00000246529 IFIT2P09913 472 aaKnown RBP21.07■□□□□ 0.96
LRFN3-201ENST00000246529 CUL4AQ13619 759 aa21.07■□□□□ 0.96
LRFN3-201ENST00000246529 PRPF40AO75400 957 aaKnown RBP21.07■□□□□ 0.96
LRFN3-201ENST00000246529 SASH1O94885 1247 aa21.07■□□□□ 0.96
LRFN3-201ENST00000246529 RASEFQ8IZ41 740 aa21.07■□□□□ 0.96
LRFN3-201ENST00000246529 FAM43AQ8N2R8 423 aa21.07■□□□□ 0.96
LRFN3-201ENST00000246529 MYD88Q99836 296 aa21.07■□□□□ 0.96
LRFN3-201ENST00000246529 ECHDC1Q9NTX5 307 aa21.07■□□□□ 0.96
LRFN3-201ENST00000246529 STRCP1A6NGW2 1772 aa21.06■□□□□ 0.96
LRFN3-201ENST00000246529 SNX14Q9Y5W7 946 aa21.06■□□□□ 0.96
LRFN3-201ENST00000246529 UTYO14607 1347 aa21.06■□□□□ 0.96
LRFN3-201ENST00000246529 HSPA2P54652 639 aa21.06■□□□□ 0.96
LRFN3-201ENST00000246529 IL17RAQ96F46 866 aa21.06■□□□□ 0.96
LRFN3-201ENST00000246529 LARP6Q9BRS8 491 aaKnown RBP21.06■□□□□ 0.96
LRFN3-201ENST00000246529 CCDC8Q9H0W5 538 aaPredicted RBP21.06■□□□□ 0.96
LRFN3-201ENST00000246529 C5P01031 1676 aa21.06■□□□□ 0.96
LRFN3-201ENST00000246529 NEURL1BA8MQ27 555 aa21.05■□□□□ 0.96
LRFN3-201ENST00000246529 EPHA10Q5JZY3 1008 aa21.05■□□□□ 0.96
LRFN3-201ENST00000246529 TLR7Q9NYK1 1049 aaKnown RBP21.05■□□□□ 0.96
LRFN3-201ENST00000246529 LARP1Q6PKG0 1096 aaKnown RBP21.05■□□□□ 0.96
LRFN3-201ENST00000246529 EAF2Q96CJ1 260 aaPredicted RBP21.05■□□□□ 0.96
LRFN3-201ENST00000246529 RRAGDQ9NQL2 400 aaPredicted RBP21.05■□□□□ 0.96
LRFN3-201ENST00000246529 DIAPH3Q9NSV4 1193 aa21.05■□□□□ 0.96
LRFN3-201ENST00000246529 CAVIN1Q6NZI2 390 aaKnown RBP21.04■□□□□ 0.96
LRFN3-201ENST00000246529 ERC1Q8IUD2 1116 aa21.04■□□□□ 0.96
LRFN3-201ENST00000246529 LMTK3Q96Q04 1460 aa21.04■□□□□ 0.96
LRFN3-201ENST00000246529 CPA1P15085 419 aa21.03■□□□□ 0.96
LRFN3-201ENST00000246529 PTH1RQ03431 593 aa21.03■□□□□ 0.96
LRFN3-201ENST00000246529 G3BP1Q13283 466 aaKnown RBP eCLIP21.03■□□□□ 0.96
LRFN3-201ENST00000246529 GCKRQ14397 625 aa21.03■□□□□ 0.96
LRFN3-201ENST00000246529 TNS3Q68CZ2 1445 aa21.03■□□□□ 0.96
LRFN3-201ENST00000246529 KIAA1211Q6ZU35 1233 aa21.03■□□□□ 0.96
LRFN3-201ENST00000246529 TTC5Q8N0Z6 440 aa21.03■□□□□ 0.96
LRFN3-201ENST00000246529 HDAC5Q9UQL6 1122 aa21.03■□□□□ 0.96
LRFN3-201ENST00000246529 COL18A1P39060 1754 aa21.03■□□□□ 0.96
LRFN3-201ENST00000246529 NEXNQ0ZGT2 675 aa21.03■□□□□ 0.96
LRFN3-201ENST00000246529 CADPS2Q86UW7 1296 aa21.03■□□□□ 0.96
LRFN3-201ENST00000246529 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.03■□□□□ 0.96
LRFN3-201ENST00000246529 LRP10Q7Z4F1 713 aa21.02■□□□□ 0.96
LRFN3-201ENST00000246529 GPT2Q8TD30 523 aa21.02■□□□□ 0.96
LRFN3-201ENST00000246529 DCAF5Q96JK2 942 aa21.02■□□□□ 0.96
LRFN3-201ENST00000246529 ISY1Q9ULR0 285 aaKnown RBP21.02■□□□□ 0.96
LRFN3-201ENST00000246529 GPATCH3Q96I76 525 aa21.02■□□□□ 0.95
LRFN3-201ENST00000246529 METTL22Q9BUU2 404 aaPredicted RBP21.02■□□□□ 0.95
LRFN3-201ENST00000246529 RBM27Q9P2N5 1060 aaKnown RBP21.02■□□□□ 0.95
LRFN3-201ENST00000246529 SCN11AQ9UI33 1791 aa21.02■□□□□ 0.95
LRFN3-201ENST00000246529 SPATA31A3Q5VYP0 1347 aa21.02■□□□□ 0.95
LRFN3-201ENST00000246529 EPB41L2O43491 1005 aaKnown RBP21.01■□□□□ 0.95
LRFN3-201ENST00000246529 BRD1O95696 1058 aa21.01■□□□□ 0.95
LRFN3-201ENST00000246529 SNRPA1P09661 255 aaKnown RBP21.01■□□□□ 0.95
LRFN3-201ENST00000246529 FOXD4L6Q3SYB3 417 aaPredicted RBP21.01■□□□□ 0.95
LRFN3-201ENST00000246529 FOXD4L3Q6VB84 417 aaPredicted RBP21.01■□□□□ 0.95
LRFN3-201ENST00000246529 ANKRD13DQ6ZTN6 518 aa21.01■□□□□ 0.95
LRFN3-201ENST00000246529 INTS4Q96HW7 963 aaKnown RBP21■□□□□ 0.95
LRFN3-201ENST00000246529 CABP4P57796 275 aa21■□□□□ 0.95
LRFN3-201ENST00000246529 NSFL1CQ9UNZ2 370 aaKnown RBP21■□□□□ 0.95
LRFN3-201ENST00000246529 CRYBG1Q9Y4K1 1723 aa20.99■□□□□ 0.95
LRFN3-201ENST00000246529 ATP5J2-PTCD1G3V325 749 aa20.99■□□□□ 0.95
LRFN3-201ENST00000246529 PTCD1O75127 700 aaKnown RBP20.99■□□□□ 0.95
LRFN3-201ENST00000246529 AK2P54819 239 aa20.99■□□□□ 0.95
LRFN3-201ENST00000246529 FAM227BQ96M60 508 aa20.99■□□□□ 0.95
LRFN3-201ENST00000246529 DCCP43146 1447 aa20.99■□□□□ 0.95
LRFN3-201ENST00000246529 DTNBO60941 627 aa20.99■□□□□ 0.95
LRFN3-201ENST00000246529 ZSCAN23Q3MJ62 389 aa20.99■□□□□ 0.95
LRFN3-201ENST00000246529 DDX54Q8TDD1 881 aaKnown RBP20.99■□□□□ 0.95
LRFN3-201ENST00000246529 TTC14Q96N46 770 aa20.99■□□□□ 0.95
LRFN3-201ENST00000246529 FMNL2Q96PY5 1086 aa20.99■□□□□ 0.95
LRFN3-201ENST00000246529 PRPF40BQ6NWY9 871 aaKnown RBP20.98■□□□□ 0.95
LRFN3-201ENST00000246529 EVI5LQ96CN4 794 aa20.98■□□□□ 0.95
LRFN3-201ENST00000246529 BOLA2Q9H3K6 86 aa20.98■□□□□ 0.95
LRFN3-201ENST00000246529 CASTP20810 708 aaKnown RBP20.97■□□□□ 0.95
LRFN3-201ENST00000246529 ADCK5Q3MIX3 580 aa20.97■□□□□ 0.95
LRFN3-201ENST00000246529 RUFY3Q7L099 469 aa20.97■□□□□ 0.95
LRFN3-201ENST00000246529 RUFY2Q8WXA3 655 aa20.97■□□□□ 0.95
LRFN3-201ENST00000246529 UBE3BQ7Z3V4 1068 aa20.97■□□□□ 0.95
LRFN3-201ENST00000246529 NMIQ13287 307 aaPredicted RBP20.96■□□□□ 0.95
LRFN3-201ENST00000246529 BRINP3Q76B58 766 aa20.95■□□□□ 0.94
LRFN3-201ENST00000246529 MRC1P22897 1456 aa20.95■□□□□ 0.94
LRFN3-201ENST00000246529 EDC3Q96F86 508 aaKnown RBP20.95■□□□□ 0.94
LRFN3-201ENST00000246529 LARGE1O95461 756 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms