RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 TFCP2L1Q9NZI6 479 aa12.77□□□□□ -0.37
MSH6-201ENST00000234420 DHX57Q6P158 1386 aaKnown RBP12.77□□□□□ -0.37
MSH6-201ENST00000234420 KLHL10Q6JEL2 608 aa12.77□□□□□ -0.37
MSH6-201ENST00000234420 L3MBTL2Q969R5 705 aa12.77□□□□□ -0.37
MSH6-201ENST00000234420 FSD2A1L4K1 749 aa12.76□□□□□ -0.37
MSH6-201ENST00000234420 FAM160A1Q05DH4 1040 aa12.76□□□□□ -0.37
MSH6-201ENST00000234420 RNF168Q8IYW5 571 aaPredicted RBP12.76□□□□□ -0.37
MSH6-201ENST00000234420 CYP46A1Q9Y6A2 500 aa12.76□□□□□ -0.37
MSH6-201ENST00000234420 A0A1B0GUL7 405 aa12.76□□□□□ -0.37
MSH6-201ENST00000234420 LARP1Q6PKG0 1096 aaKnown RBP12.76□□□□□ -0.37
MSH6-201ENST00000234420 KMT5BQ4FZB7 885 aa12.76□□□□□ -0.37
MSH6-201ENST00000234420 EBAG9O00559 213 aa12.76□□□□□ -0.37
MSH6-201ENST00000234420 BCAR3O75815 825 aa12.76□□□□□ -0.37
MSH6-201ENST00000234420 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
MSH6-201ENST00000234420 CWC27Q6UX04 472 aaKnown RBP12.76□□□□□ -0.37
MSH6-201ENST00000234420 GTF3C6Q969F1 213 aa12.76□□□□□ -0.37
MSH6-201ENST00000234420 CDK19Q9BWU1 502 aa12.76□□□□□ -0.37
MSH6-201ENST00000234420 ERCC3P19447 782 aa12.76□□□□□ -0.37
MSH6-201ENST00000234420 CETN2P41208 172 aa12.76□□□□□ -0.37
MSH6-201ENST00000234420 THEMISQ8N1K5 641 aaPredicted RBP12.76□□□□□ -0.37
MSH6-201ENST00000234420 PRIMPOLQ96LW4 560 aa12.76□□□□□ -0.37
MSH6-201ENST00000234420 CWC25Q9NXE8 425 aaPredicted RBP12.76□□□□□ -0.37
MSH6-201ENST00000234420 FHOD3Q2V2M9 1422 aa12.75□□□□□ -0.37
MSH6-201ENST00000234420 WHAMMQ8TF30 809 aa12.75□□□□□ -0.37
MSH6-201ENST00000234420 GUCY1B3Q02153 619 aa12.75□□□□□ -0.37
MSH6-201ENST00000234420 PPP1R12CQ9BZL4 782 aa12.75□□□□□ -0.37
MSH6-201ENST00000234420 ARFGAP3Q9NP61 516 aa12.75□□□□□ -0.37
MSH6-201ENST00000234420 A0A1W2PRG0 241 aa12.75□□□□□ -0.37
MSH6-201ENST00000234420 GOLIM4O00461 696 aa12.75□□□□□ -0.37
MSH6-201ENST00000234420 CCDC94Q9BW85 323 aaPredicted RBP12.75□□□□□ -0.37
MSH6-201ENST00000234420 RBM28Q9NW13 759 aaKnown RBP12.75□□□□□ -0.37
MSH6-201ENST00000234420 GINS2Q9Y248 185 aa12.75□□□□□ -0.37
MSH6-201ENST00000234420 TTC36A6NLP5 189 aa12.75□□□□□ -0.37
MSH6-201ENST00000234420 FERP16591 822 aa12.75□□□□□ -0.37
MSH6-201ENST00000234420 SEPT14Q6ZU15 432 aa12.75□□□□□ -0.37
MSH6-201ENST00000234420 PPP1R14CQ8TAE6 165 aa12.75□□□□□ -0.37
MSH6-201ENST00000234420 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.75□□□□□ -0.37
MSH6-201ENST00000234420 V9GYY5 206 aaPredicted RBP12.75□□□□□ -0.37
MSH6-201ENST00000234420 KRBA2Q6ZNG9 492 aa12.74□□□□□ -0.37
MSH6-201ENST00000234420 ANKS4BQ8N8V4 417 aa12.74□□□□□ -0.37
MSH6-201ENST00000234420 ZNF830Q96NB3 372 aaPredicted RBP12.74□□□□□ -0.37
MSH6-201ENST00000234420 MYD88Q99836 296 aa12.74□□□□□ -0.37
MSH6-201ENST00000234420 UTP14AQ9BVJ6 771 aaKnown RBP12.74□□□□□ -0.37
MSH6-201ENST00000234420 NAA15Q9BXJ9 866 aaKnown RBP12.74□□□□□ -0.37
MSH6-201ENST00000234420 ADCY5O95622 1261 aa12.74□□□□□ -0.37
MSH6-201ENST00000234420 VPS18Q9P253 973 aa12.74□□□□□ -0.37
MSH6-201ENST00000234420 RAB3GAP2Q9H2M9 1393 aa12.74□□□□□ -0.37
MSH6-201ENST00000234420 C11orf95C9JLR9 678 aaPredicted RBP12.74□□□□□ -0.37
MSH6-201ENST00000234420 PRPF4BQ13523 1007 aaKnown RBP12.74□□□□□ -0.37
MSH6-201ENST00000234420 MPHOSPH6Q99547 160 aaKnown RBP12.74□□□□□ -0.37
MSH6-201ENST00000234420 NUP88Q99567 741 aaPredicted RBP12.74□□□□□ -0.37
MSH6-201ENST00000234420 TRMT112Q9UI30 125 aaKnown RBP12.73□□□□□ -0.37
MSH6-201ENST00000234420 NOL7Q9UMY1 257 aaKnown RBP12.73□□□□□ -0.37
MSH6-201ENST00000234420 CCDC18Q5T9S5 1454 aa12.73□□□□□ -0.37
MSH6-201ENST00000234420 MIA2Q96PC5 1412 aa12.73□□□□□ -0.37
MSH6-201ENST00000234420 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
MSH6-201ENST00000234420 CACNA2D4Q7Z3S7 1137 aa12.73□□□□□ -0.37
MSH6-201ENST00000234420 TAOK3Q9H2K8 898 aa12.73□□□□□ -0.37
MSH6-201ENST00000234420 PAXBP1Q9Y5B6 917 aa12.73□□□□□ -0.37
MSH6-201ENST00000234420 ZEB2O60315 1214 aa12.73□□□□□ -0.37
MSH6-201ENST00000234420 NBPF8Q3BBV2 869 aa12.73□□□□□ -0.37
MSH6-201ENST00000234420 NBPF14Q5TI25 921 aa12.73□□□□□ -0.37
MSH6-201ENST00000234420 PPFIA3O75145 1194 aa12.73□□□□□ -0.37
MSH6-201ENST00000234420 CCDC183Q5T5S1 534 aa12.73□□□□□ -0.37
MSH6-201ENST00000234420 DNAJC21Q5F1R6 531 aaKnown RBP12.73□□□□□ -0.37
MSH6-201ENST00000234420 WAPLQ7Z5K2 1190 aa12.73□□□□□ -0.37
MSH6-201ENST00000234420 NSRP1Q9H0G5 558 aaKnown RBP12.73□□□□□ -0.37
MSH6-201ENST00000234420 PSMC4P43686 418 aa12.73□□□□□ -0.37
MSH6-201ENST00000234420 TPD52P55327 224 aaPredicted RBP12.73□□□□□ -0.37
MSH6-201ENST00000234420 CCDC83Q8IWF9 413 aa12.73□□□□□ -0.37
MSH6-201ENST00000234420 JADE2Q9NQC1 790 aa12.73□□□□□ -0.37
MSH6-201ENST00000234420 CAPN15O75808 1086 aa12.72□□□□□ -0.37
MSH6-201ENST00000234420 ZBTB12Q9Y330 459 aaPredicted RBP12.72□□□□□ -0.37
MSH6-201ENST00000234420 PCK1P35558 622 aa12.72□□□□□ -0.37
MSH6-201ENST00000234420 TMC6Q7Z403 805 aa12.72□□□□□ -0.37
MSH6-201ENST00000234420 CCDC12Q8WUD4 166 aaPredicted RBP12.72□□□□□ -0.37
MSH6-201ENST00000234420 EXOC5O00471 708 aa12.72□□□□□ -0.37
MSH6-201ENST00000234420 CNGA1P29973 690 aa12.72□□□□□ -0.37
MSH6-201ENST00000234420 GJC1P36383 396 aa12.72□□□□□ -0.37
MSH6-201ENST00000234420 LRCH2Q5VUJ6 765 aa12.72□□□□□ -0.37
MSH6-201ENST00000234420 IQSEC3Q9UPP2 1182 aaPredicted RBP12.72□□□□□ -0.37
MSH6-201ENST00000234420 MRVI1Q9Y6F6 885 aa12.72□□□□□ -0.37
MSH6-201ENST00000234420 RAB3IL1Q8TBN0 382 aa12.72□□□□□ -0.37
MSH6-201ENST00000234420 ZMAT2Q96NC0 199 aaKnown RBP12.72□□□□□ -0.37
MSH6-201ENST00000234420 AK9Q5TCS8 1911 aa12.72□□□□□ -0.37
MSH6-201ENST00000234420 ZBTB16Q05516 673 aa12.72□□□□□ -0.37
MSH6-201ENST00000234420 GAS2L2Q8NHY3 880 aa12.72□□□□□ -0.37
MSH6-201ENST00000234420 PTPRGP23470 1445 aa12.72□□□□□ -0.37
MSH6-201ENST00000234420 OGFOD1Q8N543 542 aa12.71□□□□□ -0.37
MSH6-201ENST00000234420 MORC4Q8TE76 937 aa12.71□□□□□ -0.37
MSH6-201ENST00000234420 PPP1R12BO60237 982 aaPredicted RBP12.71□□□□□ -0.37
MSH6-201ENST00000234420 PHACTR2O75167 634 aa12.71□□□□□ -0.37
MSH6-201ENST00000234420 GNG11P61952 73 aa12.71□□□□□ -0.37
MSH6-201ENST00000234420 HAUS7Q99871 368 aa12.71□□□□□ -0.37
MSH6-201ENST00000234420 GOLGA6L9A6NEM1 432 aa12.71□□□□□ -0.37
MSH6-201ENST00000234420 PRC1O43663 620 aa12.71□□□□□ -0.37
MSH6-201ENST00000234420 ANKRD1Q15327 319 aa12.71□□□□□ -0.37
MSH6-201ENST00000234420 PPP2R5CQ13362 524 aa12.71□□□□□ -0.37
MSH6-201ENST00000234420 WDR63Q8IWG1 891 aa12.71□□□□□ -0.37
MSH6-201ENST00000234420 ANO3Q9BYT9 981 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms