RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 GPC2Q8N158 579 aa3.09□□□□□ -1.92
PRKD3-201ENST00000234179 ABHD8Q96I13 439 aa3.09□□□□□ -1.92
PRKD3-201ENST00000234179 FMNL2Q96PY5 1086 aa3.09□□□□□ -1.92
PRKD3-201ENST00000234179 SIN3AQ96ST3 1273 aa3.09□□□□□ -1.92
PRKD3-201ENST00000234179 SAGE1Q9NXZ1 904 aa3.09□□□□□ -1.92
PRKD3-201ENST00000234179 KNSTRNQ9Y448 316 aa3.09□□□□□ -1.92
PRKD3-201ENST00000234179 SCN4AP35499 1836 aa3.08□□□□□ -1.92
PRKD3-201ENST00000234179 NRXN2Q9P2S2 1712 aa3.08□□□□□ -1.92
PRKD3-201ENST00000234179 HTATSF1O43719 755 aaKnown RBP3.08□□□□□ -1.92
PRKD3-201ENST00000234179 ATXN8OSP0DMR3 200 aa3.08□□□□□ -1.92
PRKD3-201ENST00000234179 FKBP8Q14318 412 aa3.08□□□□□ -1.92
PRKD3-201ENST00000234179 CFAP53Q96M91 514 aa3.08□□□□□ -1.92
PRKD3-201ENST00000234179 TAF1DQ9H5J8 278 aaPredicted RBP3.08□□□□□ -1.92
PRKD3-201ENST00000234179 BRCA1P38398 1863 aaKnown RBP3.08□□□□□ -1.92
PRKD3-201ENST00000234179 DLEC1Q9Y238 1755 aa3.08□□□□□ -1.92
PRKD3-201ENST00000234179 CAPN2P17655 700 aa3.08□□□□□ -1.92
PRKD3-201ENST00000234179 ZNF622Q969S3 477 aaKnown RBP eCLIP3.08□□□□□ -1.92
PRKD3-201ENST00000234179 NUDCQ9Y266 331 aa3.08□□□□□ -1.92
PRKD3-201ENST00000234179 KLRG2A4D1S0 409 aaPredicted RBP3.08□□□□□ -1.92
PRKD3-201ENST00000234179 NFKBIEO00221 500 aa3.08□□□□□ -1.92
PRKD3-201ENST00000234179 RNMTO43148 476 aaKnown RBP3.08□□□□□ -1.92
PRKD3-201ENST00000234179 PKN2Q16513 984 aaKnown RBP3.08□□□□□ -1.92
PRKD3-201ENST00000234179 INTS5Q6P9B9 1019 aaKnown RBP3.08□□□□□ -1.92
PRKD3-201ENST00000234179 DNAJC10Q8IXB1 793 aa3.08□□□□□ -1.92
PRKD3-201ENST00000234179 PNNQ9H307 717 aaKnown RBP3.08□□□□□ -1.92
PRKD3-201ENST00000234179 HSPA8P11142 646 aaKnown RBP3.08□□□□□ -1.92
PRKD3-201ENST00000234179 NOGQ13253 232 aa3.08□□□□□ -1.92
PRKD3-201ENST00000234179 KIF7Q2M1P5 1343 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 EPHX2P34913 555 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 BRPF1P55201 1214 aaPredicted RBP3.07□□□□□ -1.92
PRKD3-201ENST00000234179 CCDC102AQ96A19 550 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 CLEC11AQ9Y240 323 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 HEG1Q9ULI3 1381 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 WDR33Q9C0J8 1336 aaKnown RBP3.07□□□□□ -1.92
PRKD3-201ENST00000234179 PTCD1O75127 700 aaKnown RBP3.07□□□□□ -1.92
PRKD3-201ENST00000234179 TNIP1Q15025 636 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 NOM1Q5C9Z4 860 aaKnown RBP3.07□□□□□ -1.92
PRKD3-201ENST00000234179 SRGNP10124 158 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 CHRNA5P30532 468 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 PARP10Q53GL7 1025 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 THSD7BQ9C0I4 1608 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 ERVV-1B6SEH8 477 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 FOXN1O15353 648 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 IARSP41252 1262 aaKnown RBP3.07□□□□□ -1.92
PRKD3-201ENST00000234179 FKBP1BP68106 108 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 HSP90AB3PQ58FF7 597 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 PRR5LQ6MZQ0 368 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 NBPF5PQ86XG9 351 aaPredicted RBP3.07□□□□□ -1.92
PRKD3-201ENST00000234179 NFATC2IPQ8NCF5 419 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 SLC4A9Q96Q91 983 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 CRAMP1Q96RY5 1269 aa3.07□□□□□ -1.92
PRKD3-201ENST00000234179 SRP68Q9UHB9 627 aaKnown RBP3.07□□□□□ -1.92
PRKD3-201ENST00000234179 ABT1Q9ULW3 272 aaKnown RBP3.07□□□□□ -1.92
PRKD3-201ENST00000234179 DIAPH1O60610 1272 aaKnown RBP3.06□□□□□ -1.92
PRKD3-201ENST00000234179 GTF2E1P29083 439 aaPredicted RBP3.06□□□□□ -1.92
PRKD3-201ENST00000234179 HOXA10P31260 410 aaPredicted RBP3.06□□□□□ -1.92
PRKD3-201ENST00000234179 PRPF38BQ5VTL8 546 aaKnown RBP3.06□□□□□ -1.92
PRKD3-201ENST00000234179 SULT6B1Q6IMI4 303 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 N4BP2Q86UW6 1770 aaPredicted RBP3.06□□□□□ -1.92
PRKD3-201ENST00000234179 TIAM2Q8IVF5 1701 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 FZD9O00144 591 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 VEGFBP49765 207 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 RASSF7Q02833 373 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 PRPF40BQ6NWY9 871 aaKnown RBP3.06□□□□□ -1.92
PRKD3-201ENST00000234179 NIM1KQ8IY84 436 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 ADARB2Q9NS39 739 aaKnown RBP3.06□□□□□ -1.92
PRKD3-201ENST00000234179 BABAM1Q9NWV8 329 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 MKRN1Q9UHC7 482 aaKnown RBP3.06□□□□□ -1.92
PRKD3-201ENST00000234179 ARFGEF2Q9Y6D5 1785 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 DICER1Q9UPY3 1922 aaKnown RBP3.06□□□□□ -1.92
PRKD3-201ENST00000234179 SPDYE2BA6NHP3 402 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 ITGBL1O95965 494 aaPredicted RBP3.06□□□□□ -1.92
PRKD3-201ENST00000234179 SNRPA1P09661 255 aaKnown RBP3.06□□□□□ -1.92
PRKD3-201ENST00000234179 SPDYE6P0CI01 402 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 RPS12P25398 132 aaKnown RBP3.06□□□□□ -1.92
PRKD3-201ENST00000234179 ARHGEF6Q15052 776 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 SPDYE2Q495Y8 402 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 RBM17Q96I25 401 aaKnown RBP3.06□□□□□ -1.92
PRKD3-201ENST00000234179 CAPNS2Q96L46 248 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 ZBTB1Q9Y2K1 713 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 TLL2Q9Y6L7 1015 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 TJP1Q07157 1748 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 SCN7AQ01118 1682 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 ADAMTS7Q9UKP4 1686 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 GNAT3A8MTJ3 354 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 IL13P35225 146 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 CNTROBQ8N137 903 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 NBPF15Q8N660 670 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 CARD14Q9BXL6 1004 aa3.06□□□□□ -1.92
PRKD3-201ENST00000234179 RTF1Q92541 710 aaKnown RBP3.06□□□□□ -1.92
PRKD3-201ENST00000234179 DDX21Q9NR30 783 aaKnown RBP eCLIP3.06□□□□□ -1.92
PRKD3-201ENST00000234179 RGPD2P0DJD1 1756 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 UNCXA6NJT0 531 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 C21orf2O43822 256 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 CDC37L1Q7L3B6 337 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 PPP1R42Q7Z4L9 355 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 DZIP3Q86Y13 1208 aaKnown RBP3.05□□□□□ -1.92
PRKD3-201ENST00000234179 RPGRQ92834 1020 aaKnown RBP3.05□□□□□ -1.92
PRKD3-201ENST00000234179 SBF1O95248 1867 aa3.05□□□□□ -1.92
PRKD3-201ENST00000234179 POTECB2RU33 542 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms