RNA–Protein interactions for RNA: ENST00000229201.4

TIMELESS-201, Transcript of timeless circadian regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TIMELESS, Length 4,376 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-201ENST00000229201 XAGE3Q8WTP9 111 aa12.15□□□□□ -0.46
TIMELESS-201ENST00000229201 TRIM44Q96DX7 344 aaPredicted RBP12.15□□□□□ -0.46
TIMELESS-201ENST00000229201 PA2G4Q9UQ80 394 aaKnown RBP12.15□□□□□ -0.46
TIMELESS-201ENST00000229201 ANKRD13DQ6ZTN6 518 aa12.14□□□□□ -0.47
TIMELESS-201ENST00000229201 EVI5LQ96CN4 794 aa12.14□□□□□ -0.47
TIMELESS-201ENST00000229201 HEG1Q9ULI3 1381 aa12.14□□□□□ -0.47
TIMELESS-201ENST00000229201 PRPF40AO75400 957 aaKnown RBP12.14□□□□□ -0.47
TIMELESS-201ENST00000229201 FOXD4L5Q5VV16 416 aaPredicted RBP12.14□□□□□ -0.47
TIMELESS-201ENST00000229201 FOXD4L4Q8WXT5 416 aaPredicted RBP12.14□□□□□ -0.47
TIMELESS-201ENST00000229201 MYD88Q99836 296 aa12.14□□□□□ -0.47
TIMELESS-201ENST00000229201 PHRF1Q9P1Y6 1649 aaKnown RBP12.14□□□□□ -0.47
TIMELESS-201ENST00000229201 SUCLG2Q96I99 432 aa12.14□□□□□ -0.47
TIMELESS-201ENST00000229201 ZNF496Q96IT1 587 aaPredicted RBP12.14□□□□□ -0.47
TIMELESS-201ENST00000229201 BICC1Q9H694 974 aaKnown RBP12.14□□□□□ -0.47
TIMELESS-201ENST00000229201 RAD50Q92878 1312 aa12.14□□□□□ -0.47
TIMELESS-201ENST00000229201 ZKSCAN1P17029 563 aaPredicted RBP12.14□□□□□ -0.47
TIMELESS-201ENST00000229201 SIL1Q9H173 461 aa12.13□□□□□ -0.47
TIMELESS-201ENST00000229201 KIF1AQ12756 1690 aa12.13□□□□□ -0.47
TIMELESS-201ENST00000229201 LMO7Q8WWI1 1683 aa12.13□□□□□ -0.47
TIMELESS-201ENST00000229201 CYP2E1P05181 493 aaPredicted RBP12.13□□□□□ -0.47
TIMELESS-201ENST00000229201 METTL22Q9BUU2 404 aaPredicted RBP12.13□□□□□ -0.47
TIMELESS-201ENST00000229201 PRDM11Q9NQV5 511 aa12.13□□□□□ -0.47
TIMELESS-201ENST00000229201 USP42Q9H9J4 1324 aaKnown RBP12.13□□□□□ -0.47
TIMELESS-201ENST00000229201 PKP1Q13835 747 aa12.12□□□□□ -0.47
TIMELESS-201ENST00000229201 CUL4AQ13619 759 aa12.12□□□□□ -0.47
TIMELESS-201ENST00000229201 CAVIN1Q6NZI2 390 aaKnown RBP12.12□□□□□ -0.47
TIMELESS-201ENST00000229201 GCKRQ14397 625 aa12.12□□□□□ -0.47
TIMELESS-201ENST00000229201 TOM1L2Q6ZVM7 507 aa12.11□□□□□ -0.47
TIMELESS-201ENST00000229201 PANK2Q9BZ23 570 aa12.11□□□□□ -0.47
TIMELESS-201ENST00000229201 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.11□□□□□ -0.47
TIMELESS-201ENST00000229201 DCCP43146 1447 aa12.11□□□□□ -0.47
TIMELESS-201ENST00000229201 MST1RQ04912 1400 aa12.11□□□□□ -0.47
TIMELESS-201ENST00000229201 NEURL1BA8MQ27 555 aa12.11□□□□□ -0.47
TIMELESS-201ENST00000229201 CCDC8Q9H0W5 538 aaPredicted RBP12.11□□□□□ -0.47
TIMELESS-201ENST00000229201 KDM3BQ7LBC6 1761 aa12.11□□□□□ -0.47
TIMELESS-201ENST00000229201 UTYO14607 1347 aa12.11□□□□□ -0.47
TIMELESS-201ENST00000229201 MBD3O95983 291 aa12.11□□□□□ -0.47
TIMELESS-201ENST00000229201 FSD1Q9BTV5 496 aa12.11□□□□□ -0.47
TIMELESS-201ENST00000229201 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
TIMELESS-201ENST00000229201 PDIA6Q15084 440 aa12.11□□□□□ -0.47
TIMELESS-201ENST00000229201 A0A0G2JS52 829 aa12.1□□□□□ -0.47
TIMELESS-201ENST00000229201 LSG1Q9H089 658 aaKnown RBP12.1□□□□□ -0.47
TIMELESS-201ENST00000229201 SNX14Q9Y5W7 946 aa12.1□□□□□ -0.47
TIMELESS-201ENST00000229201 TNS3Q68CZ2 1445 aa12.1□□□□□ -0.47
TIMELESS-201ENST00000229201 SPATA31A3Q5VYP0 1347 aa12.1□□□□□ -0.47
TIMELESS-201ENST00000229201 RNF20Q5VTR2 975 aa12.1□□□□□ -0.47
TIMELESS-201ENST00000229201 LMBRD1Q9NUN5 540 aa12.1□□□□□ -0.47
TIMELESS-201ENST00000229201 LIMCH1Q9UPQ0 1083 aa12.1□□□□□ -0.47
TIMELESS-201ENST00000229201 USP16Q9Y5T5 823 aa12.1□□□□□ -0.47
TIMELESS-201ENST00000229201 IGKV5-2P06315 115 aa12.1□□□□□ -0.47
TIMELESS-201ENST00000229201 SYAP1Q96A49 352 aaPredicted RBP12.1□□□□□ -0.47
TIMELESS-201ENST00000229201 CYP46A1Q9Y6A2 500 aa12.1□□□□□ -0.47
TIMELESS-201ENST00000229201 RGPD2P0DJD1 1756 aa12.09□□□□□ -0.47
TIMELESS-201ENST00000229201 CYP27B1O15528 508 aa12.09□□□□□ -0.47
TIMELESS-201ENST00000229201 CASTP20810 708 aaKnown RBP12.09□□□□□ -0.47
TIMELESS-201ENST00000229201 IL17RAQ96F46 866 aa12.09□□□□□ -0.47
TIMELESS-201ENST00000229201 NASPP49321 788 aaPredicted RBP12.09□□□□□ -0.47
TIMELESS-201ENST00000229201 BOLA2Q9H3K6 86 aa12.09□□□□□ -0.47
TIMELESS-201ENST00000229201 SMC3Q9UQE7 1217 aa12.09□□□□□ -0.47
TIMELESS-201ENST00000229201 CHMP3Q9Y3E7 222 aa12.09□□□□□ -0.47
TIMELESS-201ENST00000229201 A0A087WZG4 1122 aa12.09□□□□□ -0.47
TIMELESS-201ENST00000229201 BRD1O95696 1058 aa12.09□□□□□ -0.47
TIMELESS-201ENST00000229201 PRPF40BQ6NWY9 871 aaKnown RBP12.09□□□□□ -0.47
TIMELESS-201ENST00000229201 UBE3BQ7Z3V4 1068 aa12.09□□□□□ -0.47
TIMELESS-201ENST00000229201 EAF2Q96CJ1 260 aaPredicted RBP12.09□□□□□ -0.47
TIMELESS-201ENST00000229201 JAKMIP1Q96N16 626 aaKnown RBP12.09□□□□□ -0.47
TIMELESS-201ENST00000229201 ATP6V1DQ9Y5K8 247 aa12.09□□□□□ -0.47
TIMELESS-201ENST00000229201 PSMA5P28066 241 aa12.08□□□□□ -0.48
TIMELESS-201ENST00000229201 ZCRB1Q8TBF4 217 aaKnown RBP12.08□□□□□ -0.48
TIMELESS-201ENST00000229201 PLEKHG2Q9H7P9 1386 aa12.08□□□□□ -0.48
TIMELESS-201ENST00000229201 SASH1O94885 1247 aa12.08□□□□□ -0.48
TIMELESS-201ENST00000229201 IL25Q9H293 177 aa12.08□□□□□ -0.48
TIMELESS-201ENST00000229201 KDM6AO15550 1401 aaPredicted RBP12.08□□□□□ -0.48
TIMELESS-201ENST00000229201 EVA1CP58658 441 aa12.08□□□□□ -0.48
TIMELESS-201ENST00000229201 ZSCAN31Q96LW9 406 aaPredicted RBP12.08□□□□□ -0.48
TIMELESS-201ENST00000229201 PDRG1Q9NUG6 133 aa12.08□□□□□ -0.48
TIMELESS-201ENST00000229201 LMTK3Q96Q04 1460 aa12.08□□□□□ -0.48
TIMELESS-201ENST00000229201 DCAF8L1A6NGE4 600 aa12.07□□□□□ -0.48
TIMELESS-201ENST00000229201 GAS2L3Q86XJ1 694 aa12.07□□□□□ -0.48
TIMELESS-201ENST00000229201 ZDHHC9Q9Y397 364 aa12.07□□□□□ -0.48
TIMELESS-201ENST00000229201 PIP4K2AP48426 406 aaPredicted RBP12.07□□□□□ -0.48
TIMELESS-201ENST00000229201 HSPA2P54652 639 aa12.07□□□□□ -0.48
TIMELESS-201ENST00000229201 PLBD2Q8NHP8 589 aa12.07□□□□□ -0.48
TIMELESS-201ENST00000229201 N4BP2Q86UW6 1770 aaPredicted RBP12.07□□□□□ -0.48
TIMELESS-201ENST00000229201 PCDH11XQ9BZA7 1347 aa12.07□□□□□ -0.48
TIMELESS-201ENST00000229201 PCDH11YQ9BZA8 1340 aa12.07□□□□□ -0.48
TIMELESS-201ENST00000229201 ATP5J2-PTCD1G3V325 749 aa12.07□□□□□ -0.48
TIMELESS-201ENST00000229201 PTCD1O75127 700 aaKnown RBP12.07□□□□□ -0.48
TIMELESS-201ENST00000229201 AK2P54819 239 aa12.07□□□□□ -0.48
TIMELESS-201ENST00000229201 ZSCAN23Q3MJ62 389 aa12.07□□□□□ -0.48
TIMELESS-201ENST00000229201 KAZALD1Q96I82 304 aa12.07□□□□□ -0.48
TIMELESS-201ENST00000229201 MEGF6O75095 1541 aa12.07□□□□□ -0.48
TIMELESS-201ENST00000229201 TRPM3Q9HCF6 1732 aaPredicted RBP12.06□□□□□ -0.48
TIMELESS-201ENST00000229201 RASEFQ8IZ41 740 aa12.06□□□□□ -0.48
TIMELESS-201ENST00000229201 COPRSQ9NQ92 184 aa12.06□□□□□ -0.48
TIMELESS-201ENST00000229201 SH2B1Q9NRF2 756 aaPredicted RBP12.06□□□□□ -0.48
TIMELESS-201ENST00000229201 CCDC171Q6TFL3 1326 aa12.06□□□□□ -0.48
TIMELESS-201ENST00000229201 ZNF445P59923 1031 aa12.06□□□□□ -0.48
TIMELESS-201ENST00000229201 FOXD4L6Q3SYB3 417 aaPredicted RBP12.06□□□□□ -0.48
TIMELESS-201ENST00000229201 FOXD4L3Q6VB84 417 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms