RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 AMOTL2Q9Y2J4 779 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 PCF11O94913 1555 aaKnown RBP12.83□□□□□ -0.36
KNOP1-201ENST00000219837 TDRD12Q587J7 1177 aaKnown RBP12.83□□□□□ -0.36
KNOP1-201ENST00000219837 GOLGA6L10A0A0M3HER8 536 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 ERICH4A6NGS2 130 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 USP8P40818 1118 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 UBE4AQ14139 1066 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 TMEM67Q5HYA8 995 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 CPLX3Q8WVH0 158 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 CDC5LQ99459 802 aaKnown RBP12.83□□□□□ -0.36
KNOP1-201ENST00000219837 IQGAP2Q13576 1575 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 DNMBPQ6XZF7 1577 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 NCAPD3P42695 1498 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 GOLIM4O00461 696 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 TOP1P11387 765 aaKnown RBP12.83□□□□□ -0.36
KNOP1-201ENST00000219837 LUZP1Q86V48 1076 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 WDR97A6NE52 1622 aa12.83□□□□□ -0.36
KNOP1-201ENST00000219837 ADGRL1O94910 1474 aa12.82□□□□□ -0.36
KNOP1-201ENST00000219837 GCOM1H8Y6P7 765 aaPredicted RBP12.82□□□□□ -0.36
KNOP1-201ENST00000219837 MYZAPP0CAP1 466 aa12.82□□□□□ -0.36
KNOP1-201ENST00000219837 GSTO1P78417 241 aa12.82□□□□□ -0.36
KNOP1-201ENST00000219837 TSPY2A6NKD2 308 aa12.82□□□□□ -0.36
KNOP1-201ENST00000219837 PRC1O43663 620 aa12.82□□□□□ -0.36
KNOP1-201ENST00000219837 PDE4BQ07343 736 aa12.82□□□□□ -0.36
KNOP1-201ENST00000219837 CCDC12Q8WUD4 166 aaPredicted RBP12.82□□□□□ -0.36
KNOP1-201ENST00000219837 INCENPQ9NQS7 918 aa12.82□□□□□ -0.36
KNOP1-201ENST00000219837 CCDC183Q5T5S1 534 aa12.82□□□□□ -0.36
KNOP1-201ENST00000219837 ACSBG1Q96GR2 724 aa12.82□□□□□ -0.36
KNOP1-201ENST00000219837 BAG3O95817 575 aa12.82□□□□□ -0.36
KNOP1-201ENST00000219837 LMAN1P49257 510 aa12.82□□□□□ -0.36
KNOP1-201ENST00000219837 RAB11FIP4Q86YS3 637 aa12.82□□□□□ -0.36
KNOP1-201ENST00000219837 CLEC11AQ9Y240 323 aa12.82□□□□□ -0.36
KNOP1-201ENST00000219837 ZSCAN12O43309 604 aa12.82□□□□□ -0.36
KNOP1-201ENST00000219837 MTIF2P46199 727 aaKnown RBP12.82□□□□□ -0.36
KNOP1-201ENST00000219837 CCDC40Q4G0X9 1142 aa12.82□□□□□ -0.36
KNOP1-201ENST00000219837 NF2P35240 595 aa12.81□□□□□ -0.36
KNOP1-201ENST00000219837 ALDH1L2Q3SY69 923 aa12.81□□□□□ -0.36
KNOP1-201ENST00000219837 ZNF354CQ86Y25 554 aa12.81□□□□□ -0.36
KNOP1-201ENST00000219837 JARID2Q92833 1246 aaPredicted RBP12.81□□□□□ -0.36
KNOP1-201ENST00000219837 PABPN1LA6NDY0 278 aaKnown RBP12.81□□□□□ -0.36
KNOP1-201ENST00000219837 ATP5J2-PTCD1G3V325 749 aa12.81□□□□□ -0.36
KNOP1-201ENST00000219837 PLEKHH1Q9ULM0 1364 aa12.81□□□□□ -0.36
KNOP1-201ENST00000219837 KIF5BP33176 963 aa12.81□□□□□ -0.36
KNOP1-201ENST00000219837 AMPD3Q01432 767 aa12.81□□□□□ -0.36
KNOP1-201ENST00000219837 C16orf71Q8IYS4 520 aaPredicted RBP12.81□□□□□ -0.36
KNOP1-201ENST00000219837 F8W031 263 aaPredicted RBP12.81□□□□□ -0.36
KNOP1-201ENST00000219837 MRPS9P82933 396 aaKnown RBP12.81□□□□□ -0.36
KNOP1-201ENST00000219837 HOOK3Q86VS8 718 aa12.81□□□□□ -0.36
KNOP1-201ENST00000219837 EMILIN1Q9Y6C2 1016 aa12.81□□□□□ -0.36
KNOP1-201ENST00000219837 NKTRP30414 1462 aaKnown RBP12.81□□□□□ -0.36
KNOP1-201ENST00000219837 FOXO3O43524 673 aa12.81□□□□□ -0.36
KNOP1-201ENST00000219837 KIF20AO95235 890 aa12.81□□□□□ -0.36
KNOP1-201ENST00000219837 YEATS4O95619 227 aa12.81□□□□□ -0.36
KNOP1-201ENST00000219837 GIGYF2Q6Y7W6 1299 aaKnown RBP12.81□□□□□ -0.36
KNOP1-201ENST00000219837 MFSD6Q6ZSS7 791 aa12.8□□□□□ -0.36
KNOP1-201ENST00000219837 EVI5LQ96CN4 794 aa12.8□□□□□ -0.36
KNOP1-201ENST00000219837 CRACR2AQ9BSW2 395 aa12.8□□□□□ -0.36
KNOP1-201ENST00000219837 CLIP2Q9UDT6 1046 aa12.8□□□□□ -0.36
KNOP1-201ENST00000219837 USO1O60763 962 aaKnown RBP12.8□□□□□ -0.36
KNOP1-201ENST00000219837 BACH2Q9BYV9 841 aa12.8□□□□□ -0.36
KNOP1-201ENST00000219837 TCERG1LQ5VWI1 586 aa12.8□□□□□ -0.36
KNOP1-201ENST00000219837 SH2B1Q9NRF2 756 aaPredicted RBP12.8□□□□□ -0.36
KNOP1-201ENST00000219837 PDIA4P13667 645 aaKnown RBP12.8□□□□□ -0.36
KNOP1-201ENST00000219837 STXBP4Q6ZWJ1 553 aa12.8□□□□□ -0.36
KNOP1-201ENST00000219837 TSPY3P0CV98 308 aa12.8□□□□□ -0.36
KNOP1-201ENST00000219837 TSPY8P0CW00 308 aa12.8□□□□□ -0.36
KNOP1-201ENST00000219837 GJB2P29033 226 aa12.8□□□□□ -0.36
KNOP1-201ENST00000219837 SLC26A6Q9BXS9 759 aa12.79□□□□□ -0.36
KNOP1-201ENST00000219837 MAGI1Q96QZ7 1491 aaPredicted RBP12.79□□□□□ -0.36
KNOP1-201ENST00000219837 HAND2P61296 217 aa12.79□□□□□ -0.36
KNOP1-201ENST00000219837 PICALMQ13492 652 aa12.79□□□□□ -0.36
KNOP1-201ENST00000219837 NBPF6Q5VWK0 638 aa12.79□□□□□ -0.36
KNOP1-201ENST00000219837 NBPF5PQ86XG9 351 aaPredicted RBP12.79□□□□□ -0.36
KNOP1-201ENST00000219837 CKAP2LQ8IYA6 745 aa12.79□□□□□ -0.36
KNOP1-201ENST00000219837 NBPF4Q96M43 638 aa12.79□□□□□ -0.36
KNOP1-201ENST00000219837 CUL7Q14999 1698 aa12.79□□□□□ -0.36
KNOP1-201ENST00000219837 TMCO5BA8MYB1 307 aa12.79□□□□□ -0.36
KNOP1-201ENST00000219837 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
KNOP1-201ENST00000219837 MAP9Q49MG5 647 aa12.79□□□□□ -0.36
KNOP1-201ENST00000219837 CCDC152Q4G0S7 254 aa12.79□□□□□ -0.36
KNOP1-201ENST00000219837 TMCO3Q6UWJ1 677 aa12.79□□□□□ -0.36
KNOP1-201ENST00000219837 ANKRD24Q8TF21 1146 aa12.79□□□□□ -0.36
KNOP1-201ENST00000219837 SHTN1A0MZ66 631 aa12.79□□□□□ -0.36
KNOP1-201ENST00000219837 CEBPAP49715 358 aaPredicted RBP12.79□□□□□ -0.36
KNOP1-201ENST00000219837 METAP2P50579 478 aaKnown RBP eCLIP12.79□□□□□ -0.36
KNOP1-201ENST00000219837 CETN1Q12798 172 aa12.79□□□□□ -0.36
KNOP1-201ENST00000219837 CRNKL1Q9BZJ0 848 aaKnown RBP12.79□□□□□ -0.36
KNOP1-201ENST00000219837 WASLO00401 505 aaPredicted RBP12.79□□□□□ -0.36
KNOP1-201ENST00000219837 CEP63Q96MT8 703 aa12.79□□□□□ -0.36
KNOP1-201ENST00000219837 TCP11L1Q9NUJ3 509 aa12.79□□□□□ -0.36
KNOP1-201ENST00000219837 PTPRCP08575 1304 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 ATP6V1AP38606 617 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 PRPF4BQ13523 1007 aaKnown RBP12.78□□□□□ -0.36
KNOP1-201ENST00000219837 GRIPAP1Q4V328 841 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 ALS2CR12Q96Q35 445 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 TEX13AQ9BXU3 409 aaPredicted RBP12.78□□□□□ -0.36
KNOP1-201ENST00000219837 KIF4BQ2VIQ3 1234 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 ISM2Q6H9L7 571 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 FSIP1Q8NA03 581 aa12.78□□□□□ -0.36
KNOP1-201ENST00000219837 DBF4Q9UBU7 674 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms