RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 EHMT1Q9H9B1 1298 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 SELENOSQ9BQE4 189 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 SWAP70Q9UH65 585 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 SRGAP3O43295 1099 aa16.75■□□□□ 0.27
SPTLC2-201ENST00000216484 CCDC196A0A1B0GTZ2 297 aa16.75■□□□□ 0.27
SPTLC2-201ENST00000216484 TTC21AQ8NDW8 1320 aa16.75■□□□□ 0.27
SPTLC2-201ENST00000216484 STMN4Q9H169 189 aaPredicted RBP16.75■□□□□ 0.27
SPTLC2-201ENST00000216484 ARFGAP3Q9NP61 516 aa16.75■□□□□ 0.27
SPTLC2-201ENST00000216484 SEPT10Q9P0V9 454 aa16.75■□□□□ 0.27
SPTLC2-201ENST00000216484 KIF20AO95235 890 aa16.75■□□□□ 0.27
SPTLC2-201ENST00000216484 ZBTB9Q96C00 473 aa16.75■□□□□ 0.27
SPTLC2-201ENST00000216484 GEN1Q17RS7 908 aa16.75■□□□□ 0.27
SPTLC2-201ENST00000216484 ZMYND15Q9H091 742 aa16.75■□□□□ 0.27
SPTLC2-201ENST00000216484 GOLGA6L9A6NEM1 432 aa16.74■□□□□ 0.27
SPTLC2-201ENST00000216484 CCDC85AQ96PX6 553 aaPredicted RBP16.74■□□□□ 0.27
SPTLC2-201ENST00000216484 CTAGE5O15320 804 aa16.74■□□□□ 0.27
SPTLC2-201ENST00000216484 TRIM7Q9C029 511 aa16.74■□□□□ 0.27
SPTLC2-201ENST00000216484 IGHMBP2P38935 993 aaKnown RBP16.74■□□□□ 0.27
SPTLC2-201ENST00000216484 ANKIB1Q9P2G1 1089 aa16.74■□□□□ 0.27
SPTLC2-201ENST00000216484 BIN1O00499 593 aa16.74■□□□□ 0.27
SPTLC2-201ENST00000216484 AMPD3Q01432 767 aa16.74■□□□□ 0.27
SPTLC2-201ENST00000216484 CABP2Q9NPB3 220 aa16.74■□□□□ 0.27
SPTLC2-201ENST00000216484 BAG4O95429 457 aaKnown RBP16.74■□□□□ 0.27
SPTLC2-201ENST00000216484 MRVI1Q9Y6F6 885 aa16.74■□□□□ 0.27
SPTLC2-201ENST00000216484 SSRP1Q08945 709 aaKnown RBP16.73■□□□□ 0.27
SPTLC2-201ENST00000216484 BAZ1AQ9NRL2 1556 aaPredicted RBP16.73■□□□□ 0.27
SPTLC2-201ENST00000216484 RSRC1Q96IZ7 334 aaKnown RBP16.73■□□□□ 0.27
SPTLC2-201ENST00000216484 UTP14AQ9BVJ6 771 aaKnown RBP16.73■□□□□ 0.27
SPTLC2-201ENST00000216484 MTHFSP49914 203 aa16.73■□□□□ 0.27
SPTLC2-201ENST00000216484 EHBP1Q8NDI1 1231 aa16.73■□□□□ 0.27
SPTLC2-201ENST00000216484 ERCC5P28715 1186 aaPredicted RBP16.73■□□□□ 0.27
SPTLC2-201ENST00000216484 STMN2Q93045 179 aa16.73■□□□□ 0.27
SPTLC2-201ENST00000216484 NAPBQ9H115 298 aa16.73■□□□□ 0.27
SPTLC2-201ENST00000216484 SMIM23A6NLE4 172 aa16.73■□□□□ 0.27
SPTLC2-201ENST00000216484 TACC1O75410 805 aa16.73■□□□□ 0.27
SPTLC2-201ENST00000216484 NLRP5P59047 1200 aa16.73■□□□□ 0.27
SPTLC2-201ENST00000216484 SLC12A7Q9Y666 1083 aa16.72■□□□□ 0.27
SPTLC2-201ENST00000216484 TMEM110-MUSTN1A8MSY1 372 aa16.72■□□□□ 0.27
SPTLC2-201ENST00000216484 STXBP4Q6ZWJ1 553 aa16.72■□□□□ 0.27
SPTLC2-201ENST00000216484 BICDL1Q6ZP65 573 aa16.72■□□□□ 0.27
SPTLC2-201ENST00000216484 ZEB2O60315 1214 aa16.72■□□□□ 0.27
SPTLC2-201ENST00000216484 RANBP6O60518 1105 aaKnown RBP16.72■□□□□ 0.27
SPTLC2-201ENST00000216484 FAM160A1Q05DH4 1040 aa16.72■□□□□ 0.27
SPTLC2-201ENST00000216484 STX1AQ16623 288 aa16.72■□□□□ 0.27
SPTLC2-201ENST00000216484 GPRASP1Q5JY77 1395 aa16.72■□□□□ 0.27
SPTLC2-201ENST00000216484 TTC14Q96N46 770 aa16.72■□□□□ 0.27
SPTLC2-201ENST00000216484 FAM114A2Q9NRY5 505 aa16.72■□□□□ 0.27
SPTLC2-201ENST00000216484 PAXBP1Q9Y5B6 917 aa16.72■□□□□ 0.27
SPTLC2-201ENST00000216484 CCDC172P0C7W6 258 aa16.72■□□□□ 0.27
SPTLC2-201ENST00000216484 GNG11P61952 73 aa16.72■□□□□ 0.27
SPTLC2-201ENST00000216484 CEP126Q9P2H0 1117 aa16.72■□□□□ 0.27
SPTLC2-201ENST00000216484 ZNF444Q8N0Y2 327 aaPredicted RBP16.71■□□□□ 0.27
SPTLC2-201ENST00000216484 CTCFLQ8NI51 663 aaPredicted RBP16.71■□□□□ 0.27
SPTLC2-201ENST00000216484 CRCPO75575 148 aa16.71■□□□□ 0.27
SPTLC2-201ENST00000216484 ADCY5O95622 1261 aa16.71■□□□□ 0.27
SPTLC2-201ENST00000216484 SEC62Q99442 399 aaKnown RBP16.71■□□□□ 0.27
SPTLC2-201ENST00000216484 STX6O43752 255 aa16.71■□□□□ 0.27
SPTLC2-201ENST00000216484 WDR63Q8IWG1 891 aa16.71■□□□□ 0.27
SPTLC2-201ENST00000216484 TCP11L1Q9NUJ3 509 aa16.71■□□□□ 0.27
SPTLC2-201ENST00000216484 ATP11AP98196 1134 aa16.71■□□□□ 0.27
SPTLC2-201ENST00000216484 PRR16Q569H4 304 aa16.71■□□□□ 0.27
SPTLC2-201ENST00000216484 PRPF31Q8WWY3 499 aaKnown RBP16.71■□□□□ 0.27
SPTLC2-201ENST00000216484 CFAP65Q6ZU64 1925 aaKnown RBP16.71■□□□□ 0.27
SPTLC2-201ENST00000216484 NEMFO60524 1076 aa16.71■□□□□ 0.26
SPTLC2-201ENST00000216484 KRT222Q8N1A0 295 aa16.71■□□□□ 0.26
SPTLC2-201ENST00000216484 TATP17735 454 aaPredicted RBP16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 CPLX4Q7Z7G2 160 aa16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 IQCA1Q86XH1 822 aa16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 SCAND2PQ9GZW5 306 aaPredicted RBP16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 MYO10Q9HD67 2058 aa16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 USP25Q9UHP3 1055 aa16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 CCDC14Q49A88 953 aa16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 DPH6Q7L8W6 267 aa16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 RSPH3Q86UC2 560 aa16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 CCDC50Q8IVM0 306 aa16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 CCT6BQ92526 530 aa16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 ATP2A1O14983 1001 aa16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 GOLGA8AA7E2F4 631 aa16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 GOLGA8BA8MQT2 603 aa16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 METTL24Q5JXM2 366 aa16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 CCDC129Q6ZRS4 1044 aa16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 CCDC110Q8TBZ0 833 aa16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 EXOSC9Q06265 439 aaKnown RBP16.7■□□□□ 0.26
SPTLC2-201ENST00000216484 CCDC194A0A1B0GVG4 234 aa16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 CAVIN4Q5BKX8 364 aa16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 CCDC114Q96M63 670 aa16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 PRKAR2BP31323 418 aa16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 GBP6Q6ZN66 633 aa16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 BTBD11A6QL63 1104 aa16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 CAPN2P17655 700 aa16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 CIZ1Q9ULV3 898 aaPredicted RBP16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 CTAGE9A4FU28 777 aa16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 CATIPQ7Z7H3 387 aa16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 FSIP1Q8NA03 581 aa16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 TSR2Q969E8 191 aaKnown RBP16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 SUDS3Q9H7L9 328 aaPredicted RBP16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 DNAJC21Q5F1R6 531 aaKnown RBP16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 ESCO1Q5FWF5 840 aa16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 VPS52Q8N1B4 723 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms