RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 IBTKQ9P2D0 1353 aaPredicted RBP24.52■■□□□ 1.52
TNFRSF1A-201ENST00000162749 NEXNQ0ZGT2 675 aa24.52■■□□□ 1.52
TNFRSF1A-201ENST00000162749 C9orf78Q9NZ63 289 aaPredicted RBP24.52■■□□□ 1.52
TNFRSF1A-201ENST00000162749 AFF2P51816 1311 aa24.52■■□□□ 1.52
TNFRSF1A-201ENST00000162749 BCL11AQ9H165 835 aa24.51■■□□□ 1.51
TNFRSF1A-201ENST00000162749 PLBD2Q8NHP8 589 aa24.51■■□□□ 1.51
TNFRSF1A-201ENST00000162749 NEURL1BA8MQ27 555 aa24.5■■□□□ 1.51
TNFRSF1A-201ENST00000162749 MYD88Q99836 296 aa24.5■■□□□ 1.51
TNFRSF1A-201ENST00000162749 GRM8O00222 908 aa24.5■■□□□ 1.51
TNFRSF1A-201ENST00000162749 STARD3NLO95772 234 aa24.5■■□□□ 1.51
TNFRSF1A-201ENST00000162749 TTLL7Q6ZT98 887 aa24.5■■□□□ 1.51
TNFRSF1A-201ENST00000162749 UTYO14607 1347 aa24.49■■□□□ 1.51
TNFRSF1A-201ENST00000162749 A0A0G2JS52 829 aa24.49■■□□□ 1.51
TNFRSF1A-201ENST00000162749 EP400Q96L91 3159 aa24.48■■□□□ 1.51
TNFRSF1A-201ENST00000162749 GJD4Q96KN9 370 aaPredicted RBP24.48■■□□□ 1.51
TNFRSF1A-201ENST00000162749 ZBTB47Q9UFB7 747 aaPredicted RBP24.48■■□□□ 1.51
TNFRSF1A-201ENST00000162749 SSH3Q8TE77 659 aa24.47■■□□□ 1.51
TNFRSF1A-201ENST00000162749 GCKRQ14397 625 aa24.47■■□□□ 1.51
TNFRSF1A-201ENST00000162749 PPP1R42Q7Z4L9 355 aa24.47■■□□□ 1.51
TNFRSF1A-201ENST00000162749 CICQ96RK0 1608 aaPredicted RBP24.46■■□□□ 1.51
TNFRSF1A-201ENST00000162749 CYP19A1P11511 503 aaPredicted RBP24.46■■□□□ 1.51
TNFRSF1A-201ENST00000162749 ATRNO75882 1429 aa24.46■■□□□ 1.51
TNFRSF1A-201ENST00000162749 KCNQ2O43526 872 aa24.46■■□□□ 1.51
TNFRSF1A-201ENST00000162749 EXOC6BQ9Y2D4 811 aa24.46■■□□□ 1.51
TNFRSF1A-201ENST00000162749 APBB1O00213 710 aa24.45■■□□□ 1.5
TNFRSF1A-201ENST00000162749 POLA2Q14181 598 aa24.45■■□□□ 1.5
TNFRSF1A-201ENST00000162749 SRGAP3O43295 1099 aa24.44■■□□□ 1.5
TNFRSF1A-201ENST00000162749 MTX1Q13505 466 aa24.44■■□□□ 1.5
TNFRSF1A-201ENST00000162749 HDAC5Q9UQL6 1122 aa24.44■■□□□ 1.5
TNFRSF1A-201ENST00000162749 MYH14Q7Z406 1995 aaKnown RBP24.44■■□□□ 1.5
TNFRSF1A-201ENST00000162749 KAZALD1Q96I82 304 aa24.43■■□□□ 1.5
TNFRSF1A-201ENST00000162749 ATP5J2-PTCD1G3V325 749 aa24.43■■□□□ 1.5
TNFRSF1A-201ENST00000162749 ZBTB3Q9H5J0 574 aa24.43■■□□□ 1.5
TNFRSF1A-201ENST00000162749 SMARCA5O60264 1052 aaPredicted RBP24.42■■□□□ 1.5
TNFRSF1A-201ENST00000162749 SUCLG2Q96I99 432 aa24.42■■□□□ 1.5
TNFRSF1A-201ENST00000162749 TRPC5Q9UL62 973 aaPredicted RBP24.42■■□□□ 1.5
TNFRSF1A-201ENST00000162749 ZNF330Q9Y3S2 320 aaPredicted RBP24.42■■□□□ 1.5
TNFRSF1A-201ENST00000162749 SBF2Q86WG5 1849 aa24.42■■□□□ 1.5
TNFRSF1A-201ENST00000162749 PALLDQ8WX93 1383 aa24.42■■□□□ 1.5
TNFRSF1A-201ENST00000162749 BTAF1O14981 1849 aa24.41■■□□□ 1.5
TNFRSF1A-201ENST00000162749 ZBTB1Q9Y2K1 713 aa24.41■■□□□ 1.5
TNFRSF1A-201ENST00000162749 LOC102724428A0A0B4J2F2 783 aa24.41■■□□□ 1.5
TNFRSF1A-201ENST00000162749 SIK1P57059 783 aa24.41■■□□□ 1.5
TNFRSF1A-201ENST00000162749 ZNF831Q5JPB2 1677 aa24.4■■□□□ 1.5
TNFRSF1A-201ENST00000162749 NHSQ6T4R5 1651 aa24.4■■□□□ 1.5
TNFRSF1A-201ENST00000162749 COL5A3P25940 1745 aaPredicted RBP24.4■■□□□ 1.5
TNFRSF1A-201ENST00000162749 C16orf71Q8IYS4 520 aaPredicted RBP24.4■■□□□ 1.5
TNFRSF1A-201ENST00000162749 ONECUT3O60422 494 aaPredicted RBP24.39■■□□□ 1.5
TNFRSF1A-201ENST00000162749 PLEKHM2Q8IWE5 1019 aa24.39■■□□□ 1.5
TNFRSF1A-201ENST00000162749 BICC1Q9H694 974 aaKnown RBP24.39■■□□□ 1.5
TNFRSF1A-201ENST00000162749 NUP98P52948 1817 aa24.39■■□□□ 1.5
TNFRSF1A-201ENST00000162749 RREB1Q92766 1687 aa24.39■■□□□ 1.5
TNFRSF1A-201ENST00000162749 ATP6V1AP38606 617 aa24.39■■□□□ 1.49
TNFRSF1A-201ENST00000162749 LRRCC1Q9C099 1032 aa24.38■■□□□ 1.49
TNFRSF1A-201ENST00000162749 ANKRD36CQ5JPF3 1778 aa24.38■■□□□ 1.49
TNFRSF1A-201ENST00000162749 OTUD7AQ8TE49 926 aaPredicted RBP24.38■■□□□ 1.49
TNFRSF1A-201ENST00000162749 BMP2KLQ5H9B9 411 aa24.37■■□□□ 1.49
TNFRSF1A-201ENST00000162749 UBE3BQ7Z3V4 1068 aa24.37■■□□□ 1.49
TNFRSF1A-201ENST00000162749 SMARCC1Q92922 1105 aaPredicted RBP24.37■■□□□ 1.49
TNFRSF1A-201ENST00000162749 A0A087WZG4 1122 aa24.37■■□□□ 1.49
TNFRSF1A-201ENST00000162749 SURF6O75683 361 aaKnown RBP24.37■■□□□ 1.49
TNFRSF1A-201ENST00000162749 FAM182BQ5T319 152 aa24.36■■□□□ 1.49
TNFRSF1A-201ENST00000162749 KIF6Q6ZMV9 814 aa24.36■■□□□ 1.49
TNFRSF1A-201ENST00000162749 IL6STP40189 918 aaPredicted RBP24.35■■□□□ 1.49
TNFRSF1A-201ENST00000162749 ITPK1Q13572 414 aa24.35■■□□□ 1.49
TNFRSF1A-201ENST00000162749 PTF1AQ7RTS3 328 aa24.35■■□□□ 1.49
TNFRSF1A-201ENST00000162749 JARID2Q92833 1246 aaPredicted RBP24.35■■□□□ 1.49
TNFRSF1A-201ENST00000162749 COL15A1P39059 1388 aa24.35■■□□□ 1.49
TNFRSF1A-201ENST00000162749 CASP7P55210 303 aa24.35■■□□□ 1.49
TNFRSF1A-201ENST00000162749 EPHA10Q5JZY3 1008 aa24.35■■□□□ 1.49
TNFRSF1A-201ENST00000162749 CWC25Q9NXE8 425 aaPredicted RBP24.35■■□□□ 1.49
TNFRSF1A-201ENST00000162749 MAP3K15Q6ZN16 1313 aa24.34■■□□□ 1.49
TNFRSF1A-201ENST00000162749 CCDC191Q8NCU4 936 aa24.34■■□□□ 1.49
TNFRSF1A-201ENST00000162749 QTRT2Q9H974 415 aaKnown RBP24.34■■□□□ 1.49
TNFRSF1A-201ENST00000162749 SEC24BO95487 1268 aa24.33■■□□□ 1.49
TNFRSF1A-201ENST00000162749 CRKLP46109 303 aaKnown RBP24.33■■□□□ 1.49
TNFRSF1A-201ENST00000162749 TCIRG1Q13488 830 aa24.33■■□□□ 1.49
TNFRSF1A-201ENST00000162749 INTS5Q6P9B9 1019 aaKnown RBP24.33■■□□□ 1.49
TNFRSF1A-201ENST00000162749 SEPT12Q8IYM1 358 aa24.33■■□□□ 1.49
TNFRSF1A-201ENST00000162749 ISCA1Q9BUE6 129 aa24.33■■□□□ 1.49
TNFRSF1A-201ENST00000162749 RAB11FIP3O75154 756 aa24.33■■□□□ 1.48
TNFRSF1A-201ENST00000162749 ARXQ96QS3 562 aa24.33■■□□□ 1.48
TNFRSF1A-201ENST00000162749 CCDC87Q9NVE4 849 aa24.33■■□□□ 1.48
TNFRSF1A-201ENST00000162749 BRWD3Q6RI45 1802 aa24.32■■□□□ 1.48
TNFRSF1A-201ENST00000162749 TUBGCP6Q96RT7 1819 aa24.32■■□□□ 1.48
TNFRSF1A-201ENST00000162749 H7C1W4 665 aa24.32■■□□□ 1.48
TNFRSF1A-201ENST00000162749 GIGYF2Q6Y7W6 1299 aaKnown RBP24.31■■□□□ 1.48
TNFRSF1A-201ENST00000162749 SALL3Q9BXA9 1300 aa24.31■■□□□ 1.48
TNFRSF1A-201ENST00000162749 GSPT1P15170 499 aaKnown RBP24.31■■□□□ 1.48
TNFRSF1A-201ENST00000162749 EIF5P55010 431 aaKnown RBP24.3■■□□□ 1.48
TNFRSF1A-201ENST00000162749 RABL6Q3YEC7 729 aaPredicted RBP24.3■■□□□ 1.48
TNFRSF1A-201ENST00000162749 PA2G4Q9UQ80 394 aaKnown RBP24.3■■□□□ 1.48
TNFRSF1A-201ENST00000162749 TRIM28Q13263 835 aaKnown RBP24.3■■□□□ 1.48
TNFRSF1A-201ENST00000162749 HLFQ16534 295 aa24.3■■□□□ 1.48
TNFRSF1A-201ENST00000162749 HSP90AB4PQ58FF6 505 aa24.3■■□□□ 1.48
TNFRSF1A-201ENST00000162749 TTC22Q5TAA0 569 aa24.3■■□□□ 1.48
TNFRSF1A-201ENST00000162749 RHPN1Q8TCX5 695 aa24.3■■□□□ 1.48
TNFRSF1A-201ENST00000162749 KIF1BPQ96EK5 621 aa24.29■■□□□ 1.48
TNFRSF1A-201ENST00000162749 IL1RAPL2Q9NP60 686 aa24.29■■□□□ 1.48
TNFRSF1A-201ENST00000162749 LY75O60449 1722 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms