RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 Rnaseh2aQ9CWY8 301 aa20.62■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Gja5Q01231 358 aa20.61■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Map3k2Q61083 619 aa20.61■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Gimap8Q75N62 688 aa20.61■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Susd4Q8BH32 490 aa20.61■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Echdc1Q9D9V3 322 aa20.61■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Ltb4r2Q9JJL9 360 aa20.61■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Ankrd31A0A140LI88 1765 aa20.61■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Frmpd3A0A140LIW3 1774 aa20.61■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Duox1A2AQ92 1551 aa20.6■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Exoc6bA6H5Z3 810 aa20.6■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Aifm3Q3TY86 605 aa20.6■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Zcwpw1Q6IR42 630 aa20.6■□□□□ 0.89
Tpm1-215ENSMUST00000113705 St5Q924W7 1134 aa20.59■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Npy5rO70342 466 aa20.59■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Plekhm2Q80TQ5 1018 aa20.59■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Ambra1A2AH22 1300 aa20.58■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Disp3A3KFU9 1347 aa20.58■□□□□ 0.89
Tpm1-215ENSMUST00000113705 MypnQ5DTJ9 1315 aa20.58■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Lmnb1P14733 588 aaKnown RBP20.58■□□□□ 0.89
Tpm1-215ENSMUST00000113705 G3bp1P97855 465 aaKnown RBP20.58■□□□□ 0.89
Tpm1-215ENSMUST00000113705 EgfrQ01279 1210 aa20.58■□□□□ 0.89
Tpm1-215ENSMUST00000113705 ArsiQ32KI9 573 aa20.58■□□□□ 0.89
Tpm1-215ENSMUST00000113705 Ank1Q02357 1862 aa20.58■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Ccdc171E9Q1U1 1324 aa20.58■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Kank1E9Q238 1360 aa20.57■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Fkbp1aP26883 108 aaKnown RBP20.57■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Rtkn2Q14B46 604 aa20.57■□□□□ 0.88
Tpm1-215ENSMUST00000113705 TrhQ62361 256 aa20.57■□□□□ 0.88
Tpm1-215ENSMUST00000113705 B4galnt4Q766D5 1034 aa20.57■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Tango6Q8C3S2 1079 aa20.57■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Igflr1Q3U4N7 345 aa20.56■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Fkbp5Q64378 456 aa20.56■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Rbm5Q91YE7 815 aaKnown RBP20.56■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Myd88P22366 296 aa20.55■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Gpr162Q3UN16 588 aa20.55■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Sgip1Q8VD37 806 aa20.55■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Ciapin1Q8WTY4 309 aa20.55■□□□□ 0.88
Tpm1-215ENSMUST00000113705 AK157302I3ITR1 129 aa20.54■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Isca1Q9D924 129 aa20.54■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Itgb4A2A863 1818 aa20.54■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Klrk1O54709 232 aa20.54■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Foxo3Q9WVH4 672 aa20.54■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Arap2Q8BZ05 1703 aa20.54■□□□□ 0.88
Tpm1-215ENSMUST00000113705 CanxP35564 591 aaKnown RBP20.53■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Mphosph10Q810V0 681 aaKnown RBP20.53■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Ppm1mQ8BU27 406 aa20.53■□□□□ 0.88
Tpm1-215ENSMUST00000113705 NmiO35309 314 aa20.52■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Ddx58Q6Q899 926 aa20.52■□□□□ 0.88
Tpm1-215ENSMUST00000113705 GptQ8QZR5 496 aa20.52■□□□□ 0.88
Tpm1-215ENSMUST00000113705 Soga3Q6NZL0 945 aa20.51■□□□□ 0.87
Tpm1-215ENSMUST00000113705 FktnQ8R507 461 aa20.51■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Nedd4P46935 887 aaKnown RBP20.51■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Eva1cP58659 440 aa20.51■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Cct4P80315 539 aaKnown RBP20.51■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Rnf180Q3U827 592 aa20.51■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Hsp90ab1P11499 724 aaKnown RBP20.5■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Nop58Q6DFW4 536 aaKnown RBP20.5■□□□□ 0.87
Tpm1-215ENSMUST00000113705 AbraQ8BUZ1 375 aa20.5■□□□□ 0.87
Tpm1-215ENSMUST00000113705 SnrkQ8VDU5 748 aa20.5■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Cyp19a1P28649 503 aa20.49■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Cd248Q91V98 765 aa20.49■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Cwc25Q9DBF7 416 aa20.49■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Myh1Q5SX40 1942 aa20.49■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Map3k13Q1HKZ5 959 aa20.49■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Cavin2Q63918 418 aaKnown RBP20.49■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Ric3Q8BPM6 367 aa20.49■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Znf330Q922H9 316 aa20.49■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Casz1Q9CWL2 1761 aa20.48■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Mrc1Q61830 1456 aa20.48■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Zap70P43404 618 aa20.48■□□□□ 0.87
Tpm1-215ENSMUST00000113705 BcanQ61361 883 aa20.48■□□□□ 0.87
Tpm1-215ENSMUST00000113705 MarsQ68FL6 902 aaKnown RBP20.47■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Atxn2lQ7TQH0 1049 aaKnown RBP20.47■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Pdzph1Q8BGR1 1238 aa20.47■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Strip1Q8C079 837 aa20.47■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Lmbr1lQ9D1E5 489 aa20.47■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Stard3nlQ9DCI3 235 aa20.47■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Mtcl1Q3UHU5 1945 aa20.47■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Cyp7a1Q64505 503 aa20.46■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Ttc19Q8CC21 365 aa20.46■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Rtn4Q99P72 1162 aaKnown RBP20.46■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Apbb1Q9QXJ1 710 aa20.46■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Cops6O88545 324 aa20.46■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Dok7Q18PE0 504 aa20.46■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Fhdc1Q3ULZ2 1149 aa20.46■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Foxo4Q9WVH3 505 aa20.46■□□□□ 0.87
Tpm1-215ENSMUST00000113705 Sh3tc1G3X9F6 1346 aa20.45■□□□□ 0.86
Tpm1-215ENSMUST00000113705 Cyp2c68K7N6C2 491 aa20.45■□□□□ 0.86
Tpm1-215ENSMUST00000113705 Clca2Q8BG22 942 aa20.45■□□□□ 0.86
Tpm1-215ENSMUST00000113705 Nutm1Q8BHP2 1126 aa20.45■□□□□ 0.86
Tpm1-215ENSMUST00000113705 Cfdp1O88271 295 aaKnown RBP20.44■□□□□ 0.86
Tpm1-215ENSMUST00000113705 Q3UPC7 1272 aa20.44■□□□□ 0.86
Tpm1-215ENSMUST00000113705 PrimpolQ6P1E7 537 aa20.44■□□□□ 0.86
Tpm1-215ENSMUST00000113705 Bend3Q6PAL0 825 aa20.44■□□□□ 0.86
Tpm1-215ENSMUST00000113705 Pcgf6Q99NA9 353 aa20.44■□□□□ 0.86
Tpm1-215ENSMUST00000113705 Fam213aQ9CYH2 218 aa20.44■□□□□ 0.86
Tpm1-215ENSMUST00000113705 Ehd4Q9EQP2 541 aa20.44■□□□□ 0.86
Tpm1-215ENSMUST00000113705 Gja10Q9WUS4 505 aa20.44■□□□□ 0.86
Tpm1-215ENSMUST00000113705 Pde3aQ9Z0X4 1141 aa20.44■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms