RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 1700006A11RikB9EHI3 544 aa13.96□□□□□ -0.17
Trim11-202ENSMUST00000108809 Ifit2Q64112 472 aa13.96□□□□□ -0.17
Trim11-202ENSMUST00000108809 Bms1Q6PGF5 1284 aaKnown RBP13.96□□□□□ -0.17
Trim11-202ENSMUST00000108809 Zbtb3Q91X45 518 aa13.96□□□□□ -0.17
Trim11-202ENSMUST00000108809 Pcdh10E9PXQ7 1057 aa13.95□□□□□ -0.18
Trim11-202ENSMUST00000108809 Fmnl2A2APV2 1086 aa13.95□□□□□ -0.18
Trim11-202ENSMUST00000108809 Pank2Q3U4S0 443 aa13.95□□□□□ -0.18
Trim11-202ENSMUST00000108809 Rnf214Q8BFU3 668 aaKnown RBP13.95□□□□□ -0.18
Trim11-202ENSMUST00000108809 Ubr2Q6WKZ8 1755 aa13.95□□□□□ -0.18
Trim11-202ENSMUST00000108809 Col15a1O35206 1367 aa13.95□□□□□ -0.18
Trim11-202ENSMUST00000108809 Mknk2Q8CDB0 459 aa13.95□□□□□ -0.18
Trim11-202ENSMUST00000108809 Ush1cQ9ES64 910 aa13.95□□□□□ -0.18
Trim11-202ENSMUST00000108809 Stx6Q9JKK1 255 aa13.95□□□□□ -0.18
Trim11-202ENSMUST00000108809 Wnk3Q80XP9 1757 aa13.95□□□□□ -0.18
Trim11-202ENSMUST00000108809 Shank2Q80Z38 1476 aa13.94□□□□□ -0.18
Trim11-202ENSMUST00000108809 Irf9Q61179 399 aa13.94□□□□□ -0.18
Trim11-202ENSMUST00000108809 Pdia6Q922R8 440 aaKnown RBP13.94□□□□□ -0.18
Trim11-202ENSMUST00000108809 Chd1lQ9CXF7 900 aa13.94□□□□□ -0.18
Trim11-202ENSMUST00000108809 Sgsm2Q80U12 1005 aa13.94□□□□□ -0.18
Trim11-202ENSMUST00000108809 SympkQ80X82 1284 aa13.94□□□□□ -0.18
Trim11-202ENSMUST00000108809 Ubxn10Q8BG34 277 aa13.94□□□□□ -0.18
Trim11-202ENSMUST00000108809 Dmrt2Q8BG36 561 aa13.94□□□□□ -0.18
Trim11-202ENSMUST00000108809 Bicc1Q99MQ1 977 aaKnown RBP13.94□□□□□ -0.18
Trim11-202ENSMUST00000108809 VgfQ0VGU4 617 aa13.93□□□□□ -0.18
Trim11-202ENSMUST00000108809 Taf7Q9R1C0 341 aa13.93□□□□□ -0.18
Trim11-202ENSMUST00000108809 Bcl2l13P59017 434 aa13.93□□□□□ -0.18
Trim11-202ENSMUST00000108809 Nol12Q8BG17 217 aa13.93□□□□□ -0.18
Trim11-202ENSMUST00000108809 Ppm1mQ8BU27 406 aa13.93□□□□□ -0.18
Trim11-202ENSMUST00000108809 Grm8P47743 908 aa13.92□□□□□ -0.18
Trim11-202ENSMUST00000108809 Cdca7lQ922M5 438 aa13.92□□□□□ -0.18
Trim11-202ENSMUST00000108809 Anp32cQ64G17 123 aa13.92□□□□□ -0.18
Trim11-202ENSMUST00000108809 Igfbp6P47880 238 aa13.91□□□□□ -0.18
Trim11-202ENSMUST00000108809 Ube2hP62257 183 aa13.91□□□□□ -0.18
Trim11-202ENSMUST00000108809 Cchcr1Q8K2I2 770 aa13.91□□□□□ -0.18
Trim11-202ENSMUST00000108809 Smc3Q9CW03 1217 aaKnown RBP13.91□□□□□ -0.18
Trim11-202ENSMUST00000108809 Ripk4Q9ERK0 786 aa13.91□□□□□ -0.18
Trim11-202ENSMUST00000108809 Tns2Q8CGB6 1400 aa13.91□□□□□ -0.18
Trim11-202ENSMUST00000108809 Mybbp1aQ7TPV4 1344 aaKnown RBP13.91□□□□□ -0.18
Trim11-202ENSMUST00000108809 Becn1O88597 448 aa13.91□□□□□ -0.18
Trim11-202ENSMUST00000108809 Mindy4Q3UQI9 744 aa13.91□□□□□ -0.18
Trim11-202ENSMUST00000108809 Zscan22Q8BGS5 496 aa13.91□□□□□ -0.18
Trim11-202ENSMUST00000108809 Edc3Q8K2D3 508 aaKnown RBP13.91□□□□□ -0.18
Trim11-202ENSMUST00000108809 Gzf1Q4VBD9 706 aa13.91□□□□□ -0.18
Trim11-202ENSMUST00000108809 Zbtb45Q52KG4 520 aa13.91□□□□□ -0.18
Trim11-202ENSMUST00000108809 Sp8Q8BMJ8 486 aa13.91□□□□□ -0.18
Trim11-202ENSMUST00000108809 Pdzd9Q9D9M4 266 aa13.91□□□□□ -0.18
Trim11-202ENSMUST00000108809 Pkp1P97350 728 aaKnown RBP13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 Pde3bQ61409 1100 aa13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 Naa30Q8CES0 364 aa13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 Sf3a1Q8K4Z5 791 aaKnown RBP13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 Ak2Q9WTP6 239 aa13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 MlecQ6ZQI3 291 aaKnown RBP13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 FocadA2AKG8 1798 aa13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 Rbm8a2A0A0N4SUH6 174 aa13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 Fam184aE9PW83 1143 aa13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 Ets1P27577 440 aa13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 F2rP30558 430 aa13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 Zfp51Q3U4L8 781 aa13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 Nlrp9bQ66X22 1003 aa13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 Ddx11Q6AXC6 880 aa13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 Ccdc178Q8CDV0 866 aa13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 Mrpl50Q8VDT9 159 aaKnown RBP13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 Rbm8aQ9CWZ3 174 aa13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 Q9D9S1 216 aa13.9□□□□□ -0.18
Trim11-202ENSMUST00000108809 Eef2kO08796 724 aa13.89□□□□□ -0.19
Trim11-202ENSMUST00000108809 Med4Q9CQA5 270 aa13.89□□□□□ -0.19
Trim11-202ENSMUST00000108809 Ccdc155Q80VJ8 648 aa13.89□□□□□ -0.19
Trim11-202ENSMUST00000108809 Olfml1Q8BSH2 233 aa13.89□□□□□ -0.19
Trim11-202ENSMUST00000108809 SrrtQ99MR6 875 aaKnown RBP13.89□□□□□ -0.19
Trim11-202ENSMUST00000108809 Iqsec3Q3TES0 1195 aa13.89□□□□□ -0.19
Trim11-202ENSMUST00000108809 Gse1Q3U3C9 1213 aa13.89□□□□□ -0.19
Trim11-202ENSMUST00000108809 Ccdc173A0JLY1 547 aa13.88□□□□□ -0.19
Trim11-202ENSMUST00000108809 Cd22P35329 862 aa13.88□□□□□ -0.19
Trim11-202ENSMUST00000108809 Tex2Q6ZPJ0 1128 aaKnown RBP13.88□□□□□ -0.19
Trim11-202ENSMUST00000108809 Lmbr1lQ9D1E5 489 aa13.88□□□□□ -0.19
Trim11-202ENSMUST00000108809 EappQ5BU09 281 aa13.87□□□□□ -0.19
Trim11-202ENSMUST00000108809 Samm50Q8BGH2 469 aa13.87□□□□□ -0.19
Trim11-202ENSMUST00000108809 Slit1Q80TR4 1531 aa13.87□□□□□ -0.19
Trim11-202ENSMUST00000108809 Ugt1a5B2RT14 529 aa13.87□□□□□ -0.19
Trim11-202ENSMUST00000108809 Tbc1d31Q6NXY1 996 aa13.87□□□□□ -0.19
Trim11-202ENSMUST00000108809 Wdr24Q8CFJ9 790 aa13.87□□□□□ -0.19
Trim11-202ENSMUST00000108809 Rbm10Q99KG3 930 aaKnown RBP13.87□□□□□ -0.19
Trim11-202ENSMUST00000108809 Bach2P97303 839 aa13.87□□□□□ -0.19
Trim11-202ENSMUST00000108809 RubcnlQ3TD16 648 aa13.87□□□□□ -0.19
Trim11-202ENSMUST00000108809 Morc2aQ69ZX6 1030 aa13.87□□□□□ -0.19
Trim11-202ENSMUST00000108809 Il1rapl2Q9ERS6 686 aa13.87□□□□□ -0.19
Trim11-202ENSMUST00000108809 Bag3Q9JLV1 577 aaKnown RBP13.87□□□□□ -0.19
Trim11-202ENSMUST00000108809 Ric1Q69ZJ7 1422 aa13.87□□□□□ -0.19
Trim11-202ENSMUST00000108809 Mst1rQ62190 1378 aa13.87□□□□□ -0.19
Trim11-202ENSMUST00000108809 Dzip1Q8BMD2 852 aa13.86□□□□□ -0.19
Trim11-202ENSMUST00000108809 Pdia4P08003 638 aaKnown RBP13.86□□□□□ -0.19
Trim11-202ENSMUST00000108809 4930504O13RikQ8C5Z9 145 aa13.86□□□□□ -0.19
Trim11-202ENSMUST00000108809 Slc26a8Q8R0C3 999 aa13.86□□□□□ -0.19
Trim11-202ENSMUST00000108809 Aox1O54754 1333 aa13.86□□□□□ -0.19
Trim11-202ENSMUST00000108809 Tbc1d4Q8BYJ6 1307 aa13.86□□□□□ -0.19
Trim11-202ENSMUST00000108809 Gm10471E9Q1C7 252 aa13.86□□□□□ -0.19
Trim11-202ENSMUST00000108809 Irf5P56477 497 aa13.86□□□□□ -0.19
Trim11-202ENSMUST00000108809 Zfp113Q8C689 439 aa13.86□□□□□ -0.19
Trim11-202ENSMUST00000108809 Sytl4Q9R0Q1 673 aa13.86□□□□□ -0.19
Trim11-202ENSMUST00000108809 Casc1Q6TDU8 730 aa13.85□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms