RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 Dctn1O08788 1281 aa20.38■□□□□ 0.85
Ubb-201ENSMUST00000019649 Ppef1O35655 650 aa20.38■□□□□ 0.85
Ubb-201ENSMUST00000019649 Zfp444Q3TDV8 331 aaKnown RBP20.38■□□□□ 0.85
Ubb-201ENSMUST00000019649 Irf9Q61179 399 aa20.38■□□□□ 0.85
Ubb-201ENSMUST00000019649 Q8C6G1 249 aa20.38■□□□□ 0.85
Ubb-201ENSMUST00000019649 St5Q924W7 1134 aa20.38■□□□□ 0.85
Ubb-201ENSMUST00000019649 Chl1P70232 1209 aa20.37■□□□□ 0.85
Ubb-201ENSMUST00000019649 Gpr162Q3UN16 588 aa20.37■□□□□ 0.85
Ubb-201ENSMUST00000019649 Fam83gQ5SWY7 812 aa20.37■□□□□ 0.85
Ubb-201ENSMUST00000019649 KarsQ99MN1 595 aaKnown RBP20.37■□□□□ 0.85
Ubb-201ENSMUST00000019649 Gm6268A2A3U9 297 aa20.36■□□□□ 0.85
Ubb-201ENSMUST00000019649 Gja5Q01231 358 aa20.36■□□□□ 0.85
Ubb-201ENSMUST00000019649 Ccar1Q8CH18 1146 aaKnown RBP20.36■□□□□ 0.85
Ubb-201ENSMUST00000019649 FktnQ8R507 461 aa20.36■□□□□ 0.85
Ubb-201ENSMUST00000019649 Ankib1Q6ZPS6 1085 aa20.35■□□□□ 0.85
Ubb-201ENSMUST00000019649 Ciapin1Q8WTY4 309 aa20.35■□□□□ 0.85
Ubb-201ENSMUST00000019649 Dbndd1Q9CZ00 160 aa20.35■□□□□ 0.85
Ubb-201ENSMUST00000019649 Echdc1Q9D9V3 322 aa20.35■□□□□ 0.85
Ubb-201ENSMUST00000019649 Cyp2d11P24457 504 aa20.34■□□□□ 0.85
Ubb-201ENSMUST00000019649 TrhQ62361 256 aa20.34■□□□□ 0.85
Ubb-201ENSMUST00000019649 Sv2bQ8BG39 683 aa20.34■□□□□ 0.85
Ubb-201ENSMUST00000019649 Susd4Q8BH32 490 aa20.34■□□□□ 0.85
Ubb-201ENSMUST00000019649 Bicc1Q99MQ1 977 aaKnown RBP20.34■□□□□ 0.85
Ubb-201ENSMUST00000019649 Nedd4P46935 887 aaKnown RBP20.33■□□□□ 0.85
Ubb-201ENSMUST00000019649 EgfrQ01279 1210 aa20.33■□□□□ 0.85
Ubb-201ENSMUST00000019649 Ltb4r2Q9JJL9 360 aa20.33■□□□□ 0.85
Ubb-201ENSMUST00000019649 Hsp90ab1P11499 724 aaKnown RBP20.32■□□□□ 0.84
Ubb-201ENSMUST00000019649 AbraQ8BUZ1 375 aa20.32■□□□□ 0.84
Ubb-201ENSMUST00000019649 Trim26Q99PN3 545 aa20.32■□□□□ 0.84
Ubb-201ENSMUST00000019649 MypnQ5DTJ9 1315 aa20.32■□□□□ 0.84
Ubb-201ENSMUST00000019649 Aplp1Q03157 653 aa20.31■□□□□ 0.84
Ubb-201ENSMUST00000019649 ArsiQ32KI9 573 aa20.31■□□□□ 0.84
Ubb-201ENSMUST00000019649 AK157302I3ITR1 129 aa20.3■□□□□ 0.84
Ubb-201ENSMUST00000019649 Ccdc60Q8C4J0 545 aa20.3■□□□□ 0.84
Ubb-201ENSMUST00000019649 Isca1Q9D924 129 aa20.3■□□□□ 0.84
Ubb-201ENSMUST00000019649 Foxo3Q9WVH4 672 aa20.3■□□□□ 0.84
Ubb-201ENSMUST00000019649 Ccdc171E9Q1U1 1324 aa20.3■□□□□ 0.84
Ubb-201ENSMUST00000019649 PrimpolQ6P1E7 537 aa20.3■□□□□ 0.84
Ubb-201ENSMUST00000019649 Ofd1Q80Z25 1017 aa20.3■□□□□ 0.84
Ubb-201ENSMUST00000019649 Ppm1mQ8BU27 406 aa20.3■□□□□ 0.84
Ubb-201ENSMUST00000019649 Megf6Q80V70 1572 aa20.29■□□□□ 0.84
Ubb-201ENSMUST00000019649 Cct4P80315 539 aaKnown RBP20.29■□□□□ 0.84
Ubb-201ENSMUST00000019649 Map3k2Q61083 619 aa20.29■□□□□ 0.84
Ubb-201ENSMUST00000019649 Ddx58Q6Q899 926 aa20.29■□□□□ 0.84
Ubb-201ENSMUST00000019649 Strip1Q8C079 837 aa20.29■□□□□ 0.84
Ubb-201ENSMUST00000019649 Myh1Q5SX40 1942 aa20.28■□□□□ 0.84
Ubb-201ENSMUST00000019649 Disp3A3KFU9 1347 aa20.28■□□□□ 0.84
Ubb-201ENSMUST00000019649 Pdzph1Q8BGR1 1238 aa20.28■□□□□ 0.84
Ubb-201ENSMUST00000019649 Pde3aQ9Z0X4 1141 aa20.28■□□□□ 0.84
Ubb-201ENSMUST00000019649 Zfp831A2ADM8 1628 aa20.27■□□□□ 0.84
Ubb-201ENSMUST00000019649 Klrk1O54709 232 aa20.27■□□□□ 0.84
Ubb-201ENSMUST00000019649 Cavin2Q63918 418 aaKnown RBP20.27■□□□□ 0.84
Ubb-201ENSMUST00000019649 B4galnt4Q766D5 1034 aa20.27■□□□□ 0.84
Ubb-201ENSMUST00000019649 Myd88P22366 296 aa20.26■□□□□ 0.83
Ubb-201ENSMUST00000019649 Fkbp5Q64378 456 aa20.26■□□□□ 0.83
Ubb-201ENSMUST00000019649 Mtcl1Q3UHU5 1945 aa20.26■□□□□ 0.83
Ubb-201ENSMUST00000019649 Aknad1E9Q8N6 675 aa20.25■□□□□ 0.83
Ubb-201ENSMUST00000019649 Plekhm2Q80TQ5 1018 aa20.25■□□□□ 0.83
Ubb-201ENSMUST00000019649 Col5a2Q3U962 1497 aa20.25■□□□□ 0.83
Ubb-201ENSMUST00000019649 Greb1lB9EJV3 1913 aa20.24■□□□□ 0.83
Ubb-201ENSMUST00000019649 Fhdc1Q3ULZ2 1149 aa20.24■□□□□ 0.83
Ubb-201ENSMUST00000019649 Polr3glQ8R0C0 218 aa20.24■□□□□ 0.83
Ubb-201ENSMUST00000019649 Cd248Q91V98 765 aa20.24■□□□□ 0.83
Ubb-201ENSMUST00000019649 Rbm5Q91YE7 815 aaKnown RBP20.24■□□□□ 0.83
Ubb-201ENSMUST00000019649 Cyp2c68K7N6C2 491 aa20.24■□□□□ 0.83
Ubb-201ENSMUST00000019649 Cyp19a1P28649 503 aa20.24■□□□□ 0.83
Ubb-201ENSMUST00000019649 Atxn2lQ7TQH0 1049 aaKnown RBP20.24■□□□□ 0.83
Ubb-201ENSMUST00000019649 Ehd4Q9EQP2 541 aa20.24■□□□□ 0.83
Ubb-201ENSMUST00000019649 Foxo4Q9WVH3 505 aa20.24■□□□□ 0.83
Ubb-201ENSMUST00000019649 Nup188Q6ZQH8 1759 aa20.23■□□□□ 0.83
Ubb-201ENSMUST00000019649 Exoc6bA6H5Z3 810 aa20.23■□□□□ 0.83
Ubb-201ENSMUST00000019649 G3bp1P97855 465 aaKnown RBP20.23■□□□□ 0.83
Ubb-201ENSMUST00000019649 Spon1Q8VCC9 807 aa20.23■□□□□ 0.83
Ubb-201ENSMUST00000019649 Cwc25Q9DBF7 416 aa20.23■□□□□ 0.83
Ubb-201ENSMUST00000019649 Sh3tc1G3X9F6 1346 aa20.22■□□□□ 0.83
Ubb-201ENSMUST00000019649 D830030K20RikE9PYQ5 218 aa20.22■□□□□ 0.83
Ubb-201ENSMUST00000019649 Gm3043K7N693 218 aa20.22■□□□□ 0.83
Ubb-201ENSMUST00000019649 Gm16440K7N6G6 218 aa20.22■□□□□ 0.83
Ubb-201ENSMUST00000019649 Gm2244L7N2A3 218 aa20.22■□□□□ 0.83
Ubb-201ENSMUST00000019649 Gm3278L7N2D2 218 aa20.22■□□□□ 0.83
Ubb-201ENSMUST00000019649 Gm8271L7N2E2 218 aa20.22■□□□□ 0.83
Ubb-201ENSMUST00000019649 Atp6v0a2P15920 856 aa20.22■□□□□ 0.83
Ubb-201ENSMUST00000019649 Olfr247E9PVJ7 320 aa20.21■□□□□ 0.83
Ubb-201ENSMUST00000019649 Olfr819K7N727 320 aa20.21■□□□□ 0.83
Ubb-201ENSMUST00000019649 Rangap1P46061 589 aaKnown RBP20.21■□□□□ 0.83
Ubb-201ENSMUST00000019649 Eva1cP58659 440 aa20.21■□□□□ 0.83
Ubb-201ENSMUST00000019649 MarsQ68FL6 902 aaKnown RBP20.21■□□□□ 0.83
Ubb-201ENSMUST00000019649 Atp2b4Q6Q477 1205 aa20.21■□□□□ 0.83
Ubb-201ENSMUST00000019649 Stard3nlQ9DCI3 235 aa20.21■□□□□ 0.83
Ubb-201ENSMUST00000019649 Znf609Q8BZ47 1413 aa20.21■□□□□ 0.83
Ubb-201ENSMUST00000019649 Aifm3Q3TY86 605 aa20.2■□□□□ 0.82
Ubb-201ENSMUST00000019649 HellsQ60848 821 aa20.2■□□□□ 0.82
Ubb-201ENSMUST00000019649 Tmco5bQ80X59 307 aa20.2■□□□□ 0.82
Ubb-201ENSMUST00000019649 Cops6O88545 324 aa20.19■□□□□ 0.82
Ubb-201ENSMUST00000019649 Nectin2P32507 530 aa20.19■□□□□ 0.82
Ubb-201ENSMUST00000019649 Soga3Q6NZL0 945 aa20.19■□□□□ 0.82
Ubb-201ENSMUST00000019649 Unc5clQ6R653 518 aa20.19■□□□□ 0.82
Ubb-201ENSMUST00000019649 GptQ8QZR5 496 aa20.19■□□□□ 0.82
Ubb-201ENSMUST00000019649 Mphosph10Q810V0 681 aaKnown RBP20.18■□□□□ 0.82
Ubb-201ENSMUST00000019649 Clca2Q8BG22 942 aa20.18■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms