RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 NPY2RP49146 381 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 CDKL1Q00532 357 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 RFTN1Q14699 578 aaPredicted RBP4.43□□□□□ -1.7
LINC00397-202ENST00000606785 CLPPQ16740 277 aaPredicted RBP4.43□□□□□ -1.7
LINC00397-202ENST00000606785 ZNF585BQ52M93 769 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 AP1ARQ63HQ0 302 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 CWC27Q6UX04 472 aaKnown RBP4.43□□□□□ -1.7
LINC00397-202ENST00000606785 SLC26A9Q7LBE3 791 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 CUZD1Q86UP6 607 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 ITIH5Q86UX2 942 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 LSMEM2Q8N112 164 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 TMEM178AQ8NBL3 297 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 SMAP2Q8WU79 429 aaPredicted RBP4.43□□□□□ -1.7
LINC00397-202ENST00000606785 SLC5A11Q8WWX8 675 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 MCHR2Q969V1 340 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 ZBTB9Q96C00 473 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 COG3Q96JB2 828 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 MAGED4Q96JG8 741 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 DCTN5Q9BTE1 182 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 NDUFAF3Q9BU61 184 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 RAB33BQ9H082 229 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 CXXC4Q9H2H0 198 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 UBE2TQ9NPD8 197 aaPredicted RBP4.43□□□□□ -1.7
LINC00397-202ENST00000606785 FARSBQ9NSD9 589 aaKnown RBP4.43□□□□□ -1.7
LINC00397-202ENST00000606785 QPCTLQ9NXS2 382 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 MIOXQ9UGB7 285 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 ERRFI1Q9UJM3 462 aaPredicted RBP4.43□□□□□ -1.7
LINC00397-202ENST00000606785 FOXJ3Q9UPW0 622 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 CHMP2BQ9UQN3 213 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 WDR37Q9Y2I8 494 aa4.43□□□□□ -1.7
LINC00397-202ENST00000606785 IGHV4-4A0A075B6R2 117 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 A0A1W2PR80 420 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 GLTPD2A6NH11 291 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 F8VZ95 297 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 RIPK2O43353 540 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 KRT36O76013 467 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 MFN2O95140 757 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 DPP4P27487 766 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 PTPN6P29350 595 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 ERVFC1-1P60608 527 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 IRX1P78414 480 aaPredicted RBP4.42□□□□□ -1.7
LINC00397-202ENST00000606785 MRPL28Q13084 256 aaKnown RBP4.42□□□□□ -1.7
LINC00397-202ENST00000606785 RBBP5Q15291 538 aaKnown RBP4.42□□□□□ -1.7
LINC00397-202ENST00000606785 ZNF672Q499Z4 452 aaPredicted RBP4.42□□□□□ -1.7
LINC00397-202ENST00000606785 NADK2Q4G0N4 442 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 RFTN2Q52LD8 501 aaPredicted RBP4.42□□□□□ -1.7
LINC00397-202ENST00000606785 LRRC8BQ6P9F7 803 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 CES3Q6UWW8 571 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 Q6ZRG5 221 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 Q71RC1 249 aaPredicted RBP4.42□□□□□ -1.7
LINC00397-202ENST00000606785 ASRGL1Q7L266 308 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 ERASQ7Z444 233 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 GOLGA7Q7Z5G4 137 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 SMIM29Q86T20 159 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 LRRC49Q8IUZ0 686 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 UNC5CLQ8IV45 518 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 GCNT2Q8N0V5 402 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 MLKLQ8NB16 471 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 STKLD1Q8NE28 680 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 OR10V1Q8NGI7 309 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 OR5M9Q8NGP3 310 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 OR2T34Q8NGX1 318 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 RDH11Q8TC12 318 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 MAPK15Q8TD08 544 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 AZIN2Q96A70 460 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 PINX1Q96BK5 328 aaKnown RBP4.42□□□□□ -1.7
LINC00397-202ENST00000606785 ZNF524Q96C55 264 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 FAM218AQ96MZ4 157 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 FUCA2Q9BTY2 467 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 MRPL13Q9BYD1 178 aaKnown RBP4.42□□□□□ -1.7
LINC00397-202ENST00000606785 MMP28Q9H239 520 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 RMND5AQ9H871 391 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 WDR76Q9H967 626 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 COG4Q9H9E3 785 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 ZNF556Q9HAH1 456 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 RRAGDQ9NQL2 400 aaPredicted RBP4.42□□□□□ -1.7
LINC00397-202ENST00000606785 P2RX2Q9UBL9 471 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 BARX2Q9UMQ3 279 aaPredicted RBP4.42□□□□□ -1.7
LINC00397-202ENST00000606785 SNX6Q9UNH7 406 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 C2CD2Q9Y426 696 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 ZNF175Q9Y473 711 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 WIPI2Q9Y4P8 454 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 CUX2O14529 1486 aa4.42□□□□□ -1.7
LINC00397-202ENST00000606785 BRD4O60885 1362 aaPredicted RBP4.41□□□□□ -1.7
LINC00397-202ENST00000606785 KDRP35968 1356 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 SH2D1BO14796 132 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 BUB1O43683 1085 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 ANXA9O76027 345 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 NDUFA7O95182 113 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 PRAMEF12O95522 483 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 CA3P07451 260 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 MBL2P11226 248 aaPredicted RBP4.41□□□□□ -1.7
LINC00397-202ENST00000606785 MYOGP15173 224 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 GBX2P52951 348 aaPredicted RBP4.41□□□□□ -1.7
LINC00397-202ENST00000606785 FOXG1P55316 489 aaPredicted RBP4.41□□□□□ -1.7
LINC00397-202ENST00000606785 ACTR1AP61163 376 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 SNTB2Q13425 540 aaKnown RBP4.41□□□□□ -1.7
LINC00397-202ENST00000606785 KLF5Q13887 457 aaPredicted RBP4.41□□□□□ -1.7
LINC00397-202ENST00000606785 P2RY14Q15391 338 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 ZRSR1Q15695 479 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms