RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 UNC50Q53HI1 259 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 CMPK2Q5EBM0 449 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 C10orf62Q5T681 223 aaPredicted RBP11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 C6orf163Q5TEZ5 329 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 BNC2Q6ZN30 1099 aaPredicted RBP11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 FGD2Q7Z6J4 655 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 DOLPP1Q86YN1 238 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 SLC34A3Q8N130 599 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 NUBPLQ8TB37 319 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 ACMSDQ8TDX5 336 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 HBEGFQ99075 208 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 FAM173AQ9BQD7 235 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 TTTY12Q9BZ98 90 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 SACM1LQ9NTJ5 587 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 TRPS1Q9UHF7 1281 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 PPT2Q9UMR5 302 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 MAST4O15021 2626 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 ICE1Q9Y2F5 2266 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 SPTAN1Q13813 2472 aaKnown RBP11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 DOPEY1Q5JWR5 2465 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 A0A1W2PS29 197 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 TLDC2A0PJX2 215 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 SLC35E2P0CK97 266 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 CCL3P10147 92 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 KRT15P19012 456 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 ATP5F1P24539 256 aaPredicted RBP11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 HTR1EP28566 365 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 GRNP28799 593 aaKnown RBP11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 DNASE1L1P49184 302 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 ART3Q13508 389 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 PIGGQ5H8A4 983 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 ZNF678Q5SXM1 525 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 NDUFAF5Q5TEU4 345 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 XKRXQ6PP77 449 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 PAOXQ6QHF9 649 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 GK5Q6ZS86 529 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 SH2D5Q6ZV89 423 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 COMMD6Q7Z4G1 85 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 CD163Q86VB7 1156 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 SLC22A16Q86VW1 577 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 CHERPQ8IWX8 916 aaKnown RBP11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 EID3Q8N140 333 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 METTL4Q8N3J2 472 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 CDYL2Q8N8U2 506 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 GOLM1Q8NBJ4 401 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 FAM13CQ8NE31 585 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 OR4K14Q8NGD5 310 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 FAM57AQ8TBR7 257 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 MARVELD3Q96A59 401 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 SGCZQ96LD1 299 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 TMEM237Q96Q45 408 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 PHF12Q96QT6 1004 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 C1QTNF3Q9BXJ4 246 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 WWTR1Q9GZV5 400 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 C12orf65Q9H3J6 166 aaKnown RBP11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 NMRK1Q9NWW6 199 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 ADAM29Q9UKF5 820 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 EMCNQ9ULC0 261 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 ENTPD4Q9Y227 616 aa11.74□□□□□ -0.53
NPLOC4-213ENST00000573519 HNRNPRO43390 633 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 GUCY1B2O75343 617 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 KRT6AP02538 564 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 KRT6BP04259 564 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 GSTA1P08263 222 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 SNRPB2P08579 225 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 NT5EP21589 574 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 HMOX2P30519 316 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 SSTR4P31391 388 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 DEKP35659 375 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 PIGAP37287 484 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 KRT6CP48668 564 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 ALDH9A1P49189 494 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 XKP51811 444 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 NR0B1P51843 470 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 SLC37A1P57057 533 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 KCNJ2P63252 427 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 RASA2Q15283 850 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 TCHHL1Q5QJ38 904 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 PRAMEF20Q5VT98 475 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 HLA-DQA1Q5Y7H0 255 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 SLC22A10Q63ZE4 541 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 ARHGAP11AQ6P4F7 1023 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 GPRIN3Q6ZVF9 776 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 LCA5Q86VQ0 697 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 TDRPQ86YL5 185 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 SLC22A9Q8IVM8 553 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 GALNT12Q8IXK2 581 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 MYRIPQ8NFW9 859 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 OR5M3Q8NGP4 307 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 BRF2Q9HAW0 419 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 DCDC2Q9UHG0 476 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 ZNF225Q9UK10 706 aa11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 KLF2Q9Y5W3 355 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-213ENST00000573519 C2orf92A0A1B0GVN3 265 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 ATP6AP2A0A1C7CYW4 349 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 C1orf226A1L170 272 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 OR6C76A6NM76 312 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 E9PLN8 166 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 MANBAO00462 879 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms