RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 MZT2AQ6P582 158 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 WDR53Q7Z5U6 358 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-205ENST00000539661 GLRX5Q86SX6 157 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 OR8H1Q8NGG4 311 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 TM9SF4Q92544 642 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 NECTIN4Q96NY8 510 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 C2orf49Q9BVC5 232 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-205ENST00000539661 GPR62Q9BZJ7 368 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 B3GAT2Q9NPZ5 323 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 TRDV1A0A1B0GX56 115 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 PIPSLA2A3N6 862 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 A8MX80 341 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 SLC22A5O76082 557 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 IRF1P10914 325 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 IFI30P13284 250 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 FLT3LGP49771 235 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 COX10Q12887 443 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 SYT14P1Q58G82 188 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 TMIGD1Q6UXZ0 262 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 CD300LDQ6UXZ3 194 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 SLC24A5Q71RS6 500 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 TRILQ7L0X0 811 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 SCRN2Q96FV2 425 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 PDXPQ96GD0 296 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 KLF16Q9BXK1 252 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-205ENST00000539661 BRD9Q9H8M2 597 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 PTTG3PQ9NZH4 202 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 MOSPD1Q9UJG1 213 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 ING4Q9UNL4 249 aa16.72■□□□□ 0.27
RAB40C-205ENST00000539661 H7C4K7 107 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 CASKO14936 926 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 TLX2O43763 284 aaPredicted RBP16.71■□□□□ 0.27
RAB40C-205ENST00000539661 HPGDSO60760 199 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 LATS1O95835 1130 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 EVI2BP34910 448 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 PER3P56645 1201 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 RPS13P62277 151 aaKnown RBP16.71■□□□□ 0.27
RAB40C-205ENST00000539661 RAB40BQ12829 278 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 NDUFA9Q16795 377 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 AGTRAPQ6RW13 159 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 HDDC2Q7Z4H3 204 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 ATF6BQ99941 703 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 GALNT9Q9HCQ5 603 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 MYNNQ9NPC7 610 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 TVP23BQ9NYZ1 205 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 QSOX1O00391 747 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 TEX28O15482 410 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 PRKYO43930 277 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 IGSF6O95976 241 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 PDGFAP04085 211 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 TP53P04637 393 aaPredicted RBP16.71■□□□□ 0.27
RAB40C-205ENST00000539661 GKP32189 559 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 TAGLNQ01995 201 aaKnown RBP16.71■□□□□ 0.27
RAB40C-205ENST00000539661 PRKCZQ05513 592 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 NAE1Q13564 534 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 P2RY14Q15391 338 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 BCDIN3DQ7Z5W3 292 aaKnown RBP16.71■□□□□ 0.27
RAB40C-205ENST00000539661 DNAJB7Q7Z6W7 309 aaPredicted RBP16.71■□□□□ 0.27
RAB40C-205ENST00000539661 METTL3Q86U44 580 aaKnown RBP16.71■□□□□ 0.27
RAB40C-205ENST00000539661 SYT14Q8NB59 555 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 OR4M2Q8NGB6 313 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 OR5AK3PQ8NH89 298 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 ASZ1Q8WWH4 475 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 CIDECQ96AQ7 238 aaPredicted RBP16.71■□□□□ 0.27
RAB40C-205ENST00000539661 OMA1Q96E52 524 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 ZNF582Q96NG8 517 aaPredicted RBP16.71■□□□□ 0.27
RAB40C-205ENST00000539661 TAS2R7Q9NYW3 318 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 STOX2Q9P2F5 926 aaPredicted RBP16.71■□□□□ 0.27
RAB40C-205ENST00000539661 MBD1Q9UIS9 605 aaPredicted RBP16.71■□□□□ 0.27
RAB40C-205ENST00000539661 YARS2Q9Y2Z4 477 aaKnown RBP16.71■□□□□ 0.27
RAB40C-205ENST00000539661 PPIL1Q9Y3C6 166 aa16.71■□□□□ 0.27
RAB40C-205ENST00000539661 SNTNA6NMZ2 147 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 SMLR1H3BR10 107 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 SLC19A2O60779 497 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 SH3BGRLO75368 114 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 PSIP1O75475 530 aaKnown RBP16.7■□□□□ 0.26
RAB40C-205ENST00000539661 UQCRC2P22695 453 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 LHCGRP22888 699 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 GAS1P54826 345 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 FOXD4Q12950 439 aaPredicted RBP16.7■□□□□ 0.26
RAB40C-205ENST00000539661 MPEG1Q2M385 716 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 ADNP2Q6IQ32 1131 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 TCTN3Q6NUS6 607 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 MED27Q6P2C8 311 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 RTN4RL1Q86UN2 441 aaPredicted RBP16.7■□□□□ 0.26
RAB40C-205ENST00000539661 LRRC20Q8TCA0 184 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 WBP2Q969T9 261 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 OR4K3Q96R72 315 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 FUZQ9BT04 418 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 RANBP3Q9H6Z4 567 aaPredicted RBP16.7■□□□□ 0.26
RAB40C-205ENST00000539661 ACAD8Q9UKU7 415 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 EXOSC1Q9Y3B2 195 aaKnown RBP16.7■□□□□ 0.26
RAB40C-205ENST00000539661 A0A1W2PRB8 838 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 ARHGEF33A8MVX0 844 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 FOXE1O00358 373 aaPredicted RBP16.7■□□□□ 0.26
RAB40C-205ENST00000539661 SLCO2B1O94956 709 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 ACP2P11117 423 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 FABP5Q01469 135 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 PTSQ03393 145 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 C2orf80Q0P641 193 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms