RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 CLCN2P51788 898 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 AP1S2P56377 157 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 KCNK10P57789 538 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 STXBP1P61764 594 aaKnown RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 RAB1AP62820 205 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 NKX6-1P78426 367 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CRADDP78560 199 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 PHEXP78562 749 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 STX4Q12846 297 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 SLC13A2Q13183 592 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 MYBPHQ13203 477 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CUL1Q13616 776 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 FAM53BQ14153 422 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 ABRAXAS2Q15018 415 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 RBBP5Q15291 538 aaKnown RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 SF3B4Q15427 424 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 OR1C1Q15619 314 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 TPSAB1Q15661 275 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 HKDC1Q2TB90 917 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 SFT2D3Q587I9 215 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 KHDC1LQ5JSQ8 128 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 ACER2Q5QJU3 275 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CES4AQ5XG92 561 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 HIST2H2BCQ6DN03 193 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 KIAA0930Q6ICG6 404 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 FRMPD2BQ6IN97 320 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 SLC25A25Q6KCM7 469 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 AADACL2Q6P093 401 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CES3Q6UWW8 571 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 RNF44Q7L0R7 432 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 GGNQ86UU5 652 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 TMEM200AQ86VY9 491 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 RPS19BP1Q86WX3 136 aaKnown RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CLYBLQ8N0X4 340 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 PDIK1LQ8N165 341 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 KRT78Q8N1N4 520 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 LIX1Q8N485 282 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 PRELID2Q8N945 189 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 Q8NA96 180 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 LINC01555Q8NAE3 123 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 POGLUT1Q8NBL1 392 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CPEB3Q8NE35 698 aaKnown RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CATSPER1Q8NEC5 780 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 TRPV3Q8NET8 790 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 TTLQ8NG68 377 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 OR10Q1Q8NGQ4 319 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 OR2A1Q8NGT9 310 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 OR9A4Q8NGU2 314 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 M1APQ8TC57 530 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 ADAMTS18Q8TE60 1221 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 ASB5Q8WWX0 329 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CDKL2Q92772 493 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 KCNJ9Q92806 393 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 TBC1D20Q96BZ9 403 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 DTNBP1Q96EV8 351 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 HES6Q96HZ4 224 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 PBKQ96KB5 322 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 RUNDC3BQ96NL0 473 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 OR1F2PQ96R84 312 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CYTH2Q99418 400 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 KRT12Q99456 494 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 PKP4Q99569 1192 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 AIF1LQ9BQI0 150 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CAPS2Q9BXY5 557 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZNF700Q9H0M5 742 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CNOT10Q9H9A5 744 aaKnown RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 PARVBQ9HBI1 364 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 FBXO6Q9NRD1 293 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 SYBUQ9NX95 663 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 ANKRD10Q9NXR5 420 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 NSMCE4AQ9NXX6 385 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 LRFN1Q9P244 771 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 B4GALT7Q9UBV7 327 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 COPS7AQ9UBW8 275 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 FBXW2Q9UKT8 454 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 NPIPA1Q9UND3 350 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 RUVBL2Q9Y230 463 aaKnown RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 R3HDM2Q9Y2K5 976 aaKnown RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 KLF13Q9Y2Y9 288 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 MTO1Q9Y2Z2 717 aaKnown RBP3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 ANGPTL3Q9Y5C1 460 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 NFS1Q9Y697 457 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 KCNE2Q9Y6J6 123 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CLCA3PQ9Y6N3 262 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 NOTCH2Q04721 2471 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 ESPL1Q14674 2120 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 NBASA2RRP1 2371 aa3.53□□□□□ -1.84
HMGN1P11-201ENST00000508668 CREBBPQ92793 2442 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 SPTBN1Q01082 2364 aaKnown RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 LOC105369274A0A096LPK9 316 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 LOC102723532A0A0G2JNH3 316 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 FAM237BA0A1B0GVD1 139 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 OR2A25A4D2G3 310 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 CLEC18AA5D8T8 446 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 UNC119BA6NIH7 251 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 VSTM2BA6NLU5 285 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 GABRR3A8MPY1 467 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 A8MVJ9 347 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 ARHGEF33A8MVX0 844 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 MAGEB17A8MXT2 336 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms