RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 RBM18Q96H35 190 aaKnown RBP12.65□□□□□ -0.38
FDPS-219ENST00000495308 FCRL1Q96LA6 429 aa12.65□□□□□ -0.38
FDPS-219ENST00000495308 LMF1Q96S06 567 aa12.65□□□□□ -0.38
FDPS-219ENST00000495308 PELOQ9BRX2 385 aaKnown RBP12.65□□□□□ -0.38
FDPS-219ENST00000495308 C1orf50Q9BV19 199 aa12.65□□□□□ -0.38
FDPS-219ENST00000495308 CNPPD1Q9BV87 410 aa12.65□□□□□ -0.38
FDPS-219ENST00000495308 CDCP1Q9H5V8 836 aa12.65□□□□□ -0.38
FDPS-219ENST00000495308 LIN28AQ9H9Z2 209 aaKnown RBP12.65□□□□□ -0.38
FDPS-219ENST00000495308 MYNNQ9NPC7 610 aa12.65□□□□□ -0.38
FDPS-219ENST00000495308 STMN3Q9NZ72 180 aa12.65□□□□□ -0.38
FDPS-219ENST00000495308 TEKT2Q9UIF3 430 aa12.65□□□□□ -0.38
FDPS-219ENST00000495308 HAO1Q9UJM8 370 aa12.65□□□□□ -0.38
FDPS-219ENST00000495308 UTS2RQ9UKP6 389 aa12.65□□□□□ -0.38
FDPS-219ENST00000495308 ERVK-19Q9WJR5 959 aa12.65□□□□□ -0.38
FDPS-219ENST00000495308 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.65□□□□□ -0.38
FDPS-219ENST00000495308 EXPH5Q8NEV8 1989 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 SNUPNO95149 360 aaKnown RBP12.64□□□□□ -0.39
FDPS-219ENST00000495308 WDPCPO95876 746 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 CT62P0C5K7 136 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 CPMP14384 443 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 DRD2P14416 443 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 PORP16435 677 aaPredicted RBP12.64□□□□□ -0.39
FDPS-219ENST00000495308 NT5EP21589 574 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 HK2P52789 917 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 ARG2P78540 354 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 C19orf57Q0VDD7 668 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 HEPACAMQ14CZ8 416 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 MEP1AQ16819 746 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 PRSS53Q2L4Q9 553 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 SPRED3Q2MJR0 410 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 ATG16L1Q676U5 607 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 FAM71E1Q6IPT2 247 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 RPS19BP1Q86WX3 136 aaKnown RBP12.64□□□□□ -0.39
FDPS-219ENST00000495308 HPS6Q86YV9 775 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 HOMEZQ8IX15 550 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 CATSPER1Q8NEC5 780 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.64□□□□□ -0.39
FDPS-219ENST00000495308 RAB3IL1Q8TBN0 382 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 ZNF721Q8TF20 911 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 ZNF75CPQ92670 426 aaPredicted RBP12.64□□□□□ -0.39
FDPS-219ENST00000495308 RIT1Q92963 219 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 GFM2Q969S9 779 aaKnown RBP12.64□□□□□ -0.39
FDPS-219ENST00000495308 TUBGCP3Q96CW5 907 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 SENP5Q96HI0 755 aaPredicted RBP12.64□□□□□ -0.39
FDPS-219ENST00000495308 FBXL20Q96IG2 436 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 METTL2AQ96IZ6 378 aaKnown RBP12.64□□□□□ -0.39
FDPS-219ENST00000495308 ZNF354BQ96LW1 612 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 PPP3R2Q96LZ3 170 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 TSSK3Q96PN8 268 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 ACBD3Q9H3P7 528 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 MANSC1Q9H8J5 431 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 PFDN4Q9NQP4 134 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 THAP1Q9NVV9 213 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 ANKRD10Q9NXR5 420 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 COPS7AQ9UBW8 275 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 MARCOQ9UEW3 520 aaPredicted RBP12.64□□□□□ -0.39
FDPS-219ENST00000495308 BAIAP2L1Q9UHR4 511 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 PSME2Q9UL46 239 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 EXO1Q9UQ84 846 aaKnown RBP12.64□□□□□ -0.39
FDPS-219ENST00000495308 ZNF780BQ9Y6R6 833 aa12.64□□□□□ -0.39
FDPS-219ENST00000495308 EML6Q6ZMW3 1958 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 DYTNA2CJ06 578 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 GABRR3A8MPY1 467 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 SUV39H1O43463 412 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 DYRK3O43781 588 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 LRATO95237 230 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 CLPSP04118 112 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 IGKV3-11P04433 115 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 KITP10721 976 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 CSNK2A2P19784 350 aaPredicted RBP12.63□□□□□ -0.39
FDPS-219ENST00000495308 DDCP20711 480 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 GSTM5P46439 218 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 OCRLQ01968 901 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 LTB4RQ15722 352 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 PLEKHN1Q494U1 663 aaPredicted RBP12.63□□□□□ -0.39
FDPS-219ENST00000495308 ATP6AP1LQ52LC2 224 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 C6orf136Q5SQH8 315 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 HSDL2Q6YN16 418 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 Q6ZS92 163 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 TICAM1Q8IUC6 712 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 TRIM42Q8IWZ5 723 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 GALNT12Q8IXK2 581 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 LRRC25Q8N386 305 aaPredicted RBP12.63□□□□□ -0.39
FDPS-219ENST00000495308 LIX1Q8N485 282 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 Q8NA96 180 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 FNDC5Q8NAU1 212 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 C7orf57Q8NEG2 295 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 ADCY4Q8NFM4 1077 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 PNPLA2Q96AD5 504 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 ZNF681Q96N22 645 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 CCT7Q99832 543 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 NUF2Q9BZD4 464 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 EPN3Q9H201 632 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 CXorf21Q9HAI6 301 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 MIEF1Q9NQG6 463 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 ANAPC2Q9UJX6 822 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 B3GNT3Q9Y2A9 372 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 TMED5Q9Y3A6 229 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 RELNP78509 3460 aa12.63□□□□□ -0.39
FDPS-219ENST00000495308 UBR5O95071 2799 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms