RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 ALKBH4Q9NXW9 302 aa19.12■□□□□ 0.65
CPNE1-219ENST00000440240 PYCARDQ9ULZ3 195 aa19.12■□□□□ 0.65
CPNE1-219ENST00000440240 PCDHGB3Q9Y5G1 929 aa19.12■□□□□ 0.65
CPNE1-219ENST00000440240 TNPO3Q9Y5L0 923 aaKnown RBP19.12■□□□□ 0.65
CPNE1-219ENST00000440240 NADKO95544 446 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-219ENST00000440240 C2P06681 752 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 HNRNPH2P55795 449 aaKnown RBP19.11■□□□□ 0.65
CPNE1-219ENST00000440240 HERVK_113P63132 956 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 ERVK-8P63133 956 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 MYBPHQ13203 477 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 ZNF267Q14586 743 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-219ENST00000440240 C1orf185Q5T7R7 199 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 MRM1Q6IN84 353 aaKnown RBP19.11■□□□□ 0.65
CPNE1-219ENST00000440240 METTL2BQ6P1Q9 378 aaKnown RBP19.11■□□□□ 0.65
CPNE1-219ENST00000440240 KLC3Q6P597 504 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 ADGRD1Q6QNK2 874 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 LYPD8Q6UX82 237 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 RNF111Q6ZNA4 994 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 CENPLQ8N0S6 344 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-219ENST00000440240 FBXW8Q8N3Y1 598 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 FAM13CQ8NE31 585 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 ERVK-6Q9BXR3 956 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 IPPKQ9H8X2 491 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 ACKR4Q9NPB9 350 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 QPCTLQ9NXS2 382 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 ERVK-19Q9WJR5 959 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 ASB4Q9Y574 426 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 EML6Q6ZMW3 1958 aa19.11■□□□□ 0.65
CPNE1-219ENST00000440240 A0A0G2JNJ9 132 aa19.1■□□□□ 0.65
CPNE1-219ENST00000440240 CAPN14A8MX76 684 aa19.1■□□□□ 0.65
CPNE1-219ENST00000440240 FOXE1O00358 373 aaPredicted RBP19.1■□□□□ 0.65
CPNE1-219ENST00000440240 FBXO45P0C2W1 286 aa19.1■□□□□ 0.65
CPNE1-219ENST00000440240 FAM58BPP0C7Q3 252 aa19.1■□□□□ 0.65
CPNE1-219ENST00000440240 SLC35E2P0CK97 266 aa19.1■□□□□ 0.65
CPNE1-219ENST00000440240 BSGP35613 385 aa19.1■□□□□ 0.65
CPNE1-219ENST00000440240 PIK3CGP48736 1102 aa19.1■□□□□ 0.65
CPNE1-219ENST00000440240 SLC37A1P57057 533 aa19.1■□□□□ 0.65
CPNE1-219ENST00000440240 GUCY2DQ02846 1103 aa19.1■□□□□ 0.65
CPNE1-219ENST00000440240 PCBP2Q15366 365 aaKnown RBP eCLIP19.1■□□□□ 0.652e-7■■□□□ 12.7
CPNE1-219ENST00000440240 CPSF6Q16630 551 aaKnown RBP eCLIP19.1■□□□□ 0.65
CPNE1-219ENST00000440240 MROH9Q5TGP6 573 aa19.1■□□□□ 0.65
CPNE1-219ENST00000440240 TAGAPQ8N103 731 aa19.1■□□□□ 0.65
CPNE1-219ENST00000440240 LRRC25Q8N386 305 aaPredicted RBP19.1■□□□□ 0.65
CPNE1-219ENST00000440240 GAL3ST4Q96RP7 486 aa19.1■□□□□ 0.65
CPNE1-219ENST00000440240 WWTR1Q9GZV5 400 aa19.1■□□□□ 0.65
CPNE1-219ENST00000440240 ZNF703Q9H7S9 590 aaPredicted RBP19.1■□□□□ 0.65
CPNE1-219ENST00000440240 B4GALT7Q9UBV7 327 aa19.1■□□□□ 0.65
CPNE1-219ENST00000440240 Q9UFV3 132 aa19.1■□□□□ 0.65
CPNE1-219ENST00000440240 A0A0A6YYD5 115 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 A0A1W2PR48 441 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 ANKRD33BA6NCL7 494 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 EEDO75530 441 aaKnown RBP19.09■□□□□ 0.65
CPNE1-219ENST00000440240 KLHL2O95198 593 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 RFPL3SP0C7P2 107 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 NR2F6P10588 404 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 CASQ1P31415 396 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 IRF9Q00978 393 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 GTF2H2Q13888 395 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 SLC25A35Q3KQZ1 300 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 TBCELQ5QJ74 424 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 PRAMEF20Q5VT98 475 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 GTF2H2CQ6P1K8 395 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 ZDHHC24Q6UX98 284 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 TMEM200AQ86VY9 491 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 L3MBTL4Q8NA19 623 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 OR10G3Q8NGC4 313 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 ZNF717Q9BY31 904 aaPredicted RBP19.09■□□□□ 0.65
CPNE1-219ENST00000440240 SNX15Q9NRS6 342 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 CHCHD2Q9Y6H1 151 aaPredicted RBP19.09■□□□□ 0.65
CPNE1-219ENST00000440240 MED13LQ71F56 2210 aa19.09■□□□□ 0.65
CPNE1-219ENST00000440240 A0A096LPK6 155 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 GLOD5A6NK44 160 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 WASHC1A8K0Z3 465 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 TMPRSS11DO60235 418 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 PRKRAO75569 313 aaKnown RBP19.08■□□□□ 0.64
CPNE1-219ENST00000440240 CD1EP15812 388 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 EBPQ15125 230 aaKnown RBP19.08■□□□□ 0.64
CPNE1-219ENST00000440240 TRADDQ15628 312 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 NTRK2Q16620 822 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 RIPPLY2Q5TAB7 128 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 NUDT13Q86X67 352 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 LIX1Q8N485 282 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 NEIL3Q8TAT5 605 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 DOK4Q8TEW6 326 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 TP53INP1Q96A56 240 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 JSRP1Q96MG2 331 aaPredicted RBP19.08■□□□□ 0.64
CPNE1-219ENST00000440240 DOHHQ9BU89 302 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 PROK2Q9HC23 129 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 SPRR3Q9UBC9 169 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 CNOT11Q9UKZ1 510 aaKnown RBP19.08■□□□□ 0.64
CPNE1-219ENST00000440240 RNF11Q9Y3C5 154 aa19.08■□□□□ 0.64
CPNE1-219ENST00000440240 C2orf92A0A1B0GVN3 265 aa19.07■□□□□ 0.64
CPNE1-219ENST00000440240 TP53I11O14683 189 aa19.07■□□□□ 0.64
CPNE1-219ENST00000440240 ZWINTO95229 277 aa19.07■□□□□ 0.64
CPNE1-219ENST00000440240 CLDN9O95484 217 aa19.07■□□□□ 0.64
CPNE1-219ENST00000440240 ENDOUP21128 410 aaKnown RBP19.07■□□□□ 0.64
CPNE1-219ENST00000440240 TYK2P29597 1187 aa19.07■□□□□ 0.64
CPNE1-219ENST00000440240 ADH7P40394 386 aa19.07■□□□□ 0.64
CPNE1-219ENST00000440240 NEK2P51955 445 aa19.07■□□□□ 0.64
CPNE1-219ENST00000440240 HLA-DQA1Q5Y7H0 255 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms