RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 INSL4Q14641 139 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 CPSF6Q16630 551 aaKnown RBP eCLIP12.17□□□□□ -0.46
HERC3-203ENST00000407637 IFI44LQ53G44 452 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 ARTNQ5T4W7 220 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 MZT2AQ6P582 158 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 LYPD4Q6UWN0 246 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 TRMT11Q7Z4G4 463 aaKnown RBP12.17□□□□□ -0.46
HERC3-203ENST00000407637 HSD17B13Q7Z5P4 300 aaPredicted RBP12.17□□□□□ -0.46
HERC3-203ENST00000407637 RTL3Q8N8U3 475 aaKnown RBP12.17□□□□□ -0.46
HERC3-203ENST00000407637 ZNF454Q8N9F8 522 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 OR52I1Q8NGK6 324 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 GATAD2BQ8WXI9 593 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 CNOT9Q92600 299 aaKnown RBP12.17□□□□□ -0.46
HERC3-203ENST00000407637 EBPLQ9BY08 206 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 RNF32Q9H0A6 362 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 IMP3Q9NV31 184 aaKnown RBP12.17□□□□□ -0.46
HERC3-203ENST00000407637 BABAM2Q9NXR7 383 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 KLK14Q9P0G3 267 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 CLCA2Q9UQC9 943 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 DERAQ9Y315 318 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 EP400Q96L91 3159 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 PQLC2LA1A4F0 135 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 SGCEO43556 437 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 SOD1P00441 154 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 AKAP5P24588 427 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 ATP5A1P25705 553 aaKnown RBP12.17□□□□□ -0.46
HERC3-203ENST00000407637 HLA-FP30511 346 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 TAF6P49848 677 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 SNRPGP62308 76 aaKnown RBP12.17□□□□□ -0.46
HERC3-203ENST00000407637 HFEQ30201 348 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 TCEANCQ8N8B7 351 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 OR4K2Q8NGD2 314 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 KCNJ9Q92806 393 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 OTULINQ96BN8 352 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 C12orf66Q96MD2 445 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 APOL5Q9BWW9 433 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 NKX6-2Q9C056 277 aaPredicted RBP12.17□□□□□ -0.46
HERC3-203ENST00000407637 TPT1P8Q9HAU6 139 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 CRTAC1Q9NQ79 661 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 ACER3Q9NUN7 267 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 NDRG3Q9UGV2 375 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 ZFR2Q9UPR6 939 aaKnown RBP12.17□□□□□ -0.46
HERC3-203ENST00000407637 STK25O00506 426 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 PDYNP01213 254 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 HPXP02790 462 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 HMBSP08397 361 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 DRD2P14416 443 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 VIPR1P32241 457 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 IRS1P35568 1242 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 GSTM5P46439 218 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 SERTAD2Q14140 314 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 SMAD2Q15796 467 aaKnown RBP12.16□□□□□ -0.46
HERC3-203ENST00000407637 PLPPR4Q7Z2D5 763 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 OR1S1Q8NH92 325 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 PSMG2Q969U7 264 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 SMIM14Q96QK8 99 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 EGFL8Q99944 293 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 SEMA3CQ99985 751 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 LATS2Q9NRM7 1088 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 TRPM7Q96QT4 1865 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 SLC19A2O60779 497 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 GADD45GO95257 159 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 RAB36O95755 333 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 FGF1P05230 155 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 HIST1H2AGP0C0S8 130 aaPredicted RBP12.16□□□□□ -0.46
HERC3-203ENST00000407637 HIST1H2ADP20671 130 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 AHCYP23526 432 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 IGFBP6P24592 240 aaPredicted RBP12.16□□□□□ -0.46
HERC3-203ENST00000407637 HNF1BP35680 557 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 SOX18P35713 384 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 CD79BP40259 229 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 ZNF140P52738 457 aaPredicted RBP12.16□□□□□ -0.46
HERC3-203ENST00000407637 OAZ1P54368 228 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 WNT4P56705 351 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 BCL2L1Q07817 233 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 PUM1Q14671 1186 aaKnown RBP eCLIP12.16□□□□□ -0.46
HERC3-203ENST00000407637 TMEM201Q5SNT2 666 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 PRAMEF19Q5SWL8 479 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 WSCD1Q658N2 575 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 HIST2H2AA3Q6FI13 130 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 AFTPHQ6ULP2 937 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 MARCH9Q86YJ5 346 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 GPR135Q8IZ08 494 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 CELF5Q8N6W0 485 aaKnown RBP12.16□□□□□ -0.46
HERC3-203ENST00000407637 HIST1H2AHQ96KK5 128 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 HIST1H2AJQ99878 128 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 TREX2Q9BQ50 279 aaPredicted RBP12.16□□□□□ -0.46
HERC3-203ENST00000407637 TMED9Q9BVK6 235 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 CHST8Q9H2A9 424 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 WWOXQ9NZC7 414 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 TMEM5Q9Y2B1 443 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 KCNK7Q9Y2U2 307 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 PCDHB7Q9Y5E2 793 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 NPTNQ9Y639 398 aa12.16□□□□□ -0.46
HERC3-203ENST00000407637 DOCK4Q8N1I0 1966 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 A8MVJ9 347 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 HEPACAM2A8MVW5 462 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 CHURC1-FNTBB4DL54 471 aa12.15□□□□□ -0.46
HERC3-203ENST00000407637 ZNF593O00488 134 aaPredicted RBP12.15□□□□□ -0.46
HERC3-203ENST00000407637 YY2O15391 372 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms