RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 GSCP56915 257 aaPredicted RBP4.56□□□□□ -1.68
GABPB1-204ENST00000396464 SP3Q02447 781 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 FOXM1Q08050 763 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 SPDYE7PQ495Y7 208 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 LINC01620Q4KN68 170 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 AWAT1Q58HT5 328 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 LIPJQ5W064 366 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 FRG2Q64ET8 278 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 DUS1LQ6P1R4 473 aaKnown RBP4.56□□□□□ -1.68
GABPB1-204ENST00000396464 TRIM65Q6PJ69 517 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 CCDC137Q6PK04 289 aaKnown RBP4.56□□□□□ -1.68
GABPB1-204ENST00000396464 ZNF841Q6ZN19 808 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 NDUFAF7Q7L592 441 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 G2E3Q7L622 706 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 DPY19L4Q7Z388 723 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 GPR142Q7Z601 462 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 MICU2Q8IYU8 434 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 ARL14EPQ8N8R7 260 aaPredicted RBP4.56□□□□□ -1.68
GABPB1-204ENST00000396464 SYT14Q8NB59 555 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 OR10Q1Q8NGQ4 319 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 OR1L4Q8NGR5 311 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 OR6S1Q8NH40 331 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 ARRDC2Q8TBH0 407 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 NRGNQ92686 78 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 THOC1Q96FV9 657 aaKnown RBP4.56□□□□□ -1.68
GABPB1-204ENST00000396464 ZNF419Q96HQ0 510 aaPredicted RBP4.56□□□□□ -1.68
GABPB1-204ENST00000396464 ELMO2Q96JJ3 720 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 CXorf58Q96LI9 332 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 FUNDC2Q9BWH2 189 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 FAM234AQ9H0X4 552 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 GANQ9H2C0 597 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 R3HDMLQ9H3Y0 253 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 ACTL8Q9H568 366 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 MCCC2Q9HCC0 563 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 ZNF275Q9NSD4 429 aaPredicted RBP4.56□□□□□ -1.68
GABPB1-204ENST00000396464 SYBUQ9NX95 663 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 SPHK1Q9NYA1 384 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 SMARCAL1Q9NZC9 954 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 EMC3Q9P0I2 261 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 HMGXB4Q9UGU5 601 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 BAZ1BQ9UIG0 1483 aaKnown RBP4.56□□□□□ -1.68
GABPB1-204ENST00000396464 GGA2Q9UJY4 613 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 PADI3Q9ULW8 664 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 NCKAP1Q9Y2A7 1128 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 PCDH11YQ9BZA8 1340 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 SALL1Q9NSC2 1324 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 TRAV18A0A075B6X5 111 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 A0A1W2PPC1 479 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 CCDC162PA2VCL2 907 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 OR2M5A3KFT3 312 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 TUBAL3A6NHL2 446 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 CLDN5O00501 218 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 CHEK1O14757 476 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 SPINT2O43291 252 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 H6PDO95479 791 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 WDPCPO95876 746 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 CST1P01037 141 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 ANXA4P09525 319 aaPredicted RBP4.55□□□□□ -1.68
GABPB1-204ENST00000396464 CCL2P13500 99 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 ENO3P13929 434 aaPredicted RBP4.55□□□□□ -1.68
GABPB1-204ENST00000396464 GJB2P29033 226 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 HOXA6P31267 233 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 HNRNPH3P31942 346 aaKnown RBP4.55□□□□□ -1.68
GABPB1-204ENST00000396464 PLA2G5P39877 138 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 CCNG1P51959 295 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 NDST2P52849 883 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 RAD23BP54727 409 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 TMPRSS3P57727 454 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 EEF1A2Q05639 463 aaKnown RBP4.55□□□□□ -1.68
GABPB1-204ENST00000396464 RCAN2Q14206 197 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 TMEM132DQ14C87 1099 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 EXOSC7Q15024 291 aaKnown RBP4.55□□□□□ -1.68
GABPB1-204ENST00000396464 STK38Q15208 465 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 CA9Q16790 459 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 ZSWIM7Q19AV6 140 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 ITPRIPL2Q3MIP1 535 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 SBK1Q52WX2 424 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 ARMCX4Q5H9R4 360 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 C6orf226Q5I0X4 101 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 EFHC1Q5JVL4 640 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 EPHA10Q5JZY3 1008 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 HIST2H2AA3Q6FI13 130 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 NCAPH2Q6IBW4 605 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 FAM109BQ6ICB4 259 aaPredicted RBP4.55□□□□□ -1.68
GABPB1-204ENST00000396464 OR2A2Q6IF42 318 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 VWA1Q6PCB0 445 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 TMEM107Q6UX40 140 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 STXBP4Q6ZWJ1 553 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 CPEB2Q7Z5Q1 589 aaKnown RBP4.55□□□□□ -1.68
GABPB1-204ENST00000396464 WDR53Q7Z5U6 358 aaPredicted RBP4.55□□□□□ -1.68
GABPB1-204ENST00000396464 FJX1Q86VR8 437 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 UEVLDQ8IX04 471 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 MB21D2Q8IYB1 491 aaPredicted RBP4.55□□□□□ -1.68
GABPB1-204ENST00000396464 SLC44A3Q8N4M1 653 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 SLC5A8Q8N695 610 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 COLGALT1Q8NBJ5 622 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 CDC26Q8NHZ8 85 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 HMGCLL1Q8TB92 370 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 LINC00476Q8WZB0 136 aa4.55□□□□□ -1.68
GABPB1-204ENST00000396464 LHX4Q969G2 390 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms