RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 LYARQ9NX58 379 aaKnown RBP17.11■□□□□ 0.33
CD40-201ENST00000372276 MKLN1Q9UL63 735 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.11■□□□□ 0.33
CD40-201ENST00000372276 ENTPD4Q9Y227 616 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 RPL36Q9Y3U8 105 aaKnown RBP17.11■□□□□ 0.33
CD40-201ENST00000372276 CFAP20Q9Y6A4 193 aaKnown RBP17.11■□□□□ 0.33
CD40-201ENST00000372276 C2orf16Q68DN1 1984 aa17.11■□□□□ 0.33
CD40-201ENST00000372276 ANHXE9PGG2 379 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 TLR4O00206 839 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 MAN2B1O00754 1011 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 UGT2B17O75795 530 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 RECKO95980 971 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 STSP08842 583 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 ADORA3P0DMS8 318 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 GSTM3P21266 225 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 ELAVL4P26378 380 aaKnown RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 IFNA8P32881 189 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 IFNGR2P38484 337 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 LIPAP38571 399 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 BCAP31P51572 246 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 STXBP1P61764 594 aaKnown RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 NCS1P62166 190 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 PRR5P85299 388 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 RHAGQ02094 409 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 OXA1LQ15070 435 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 SLC25A30Q5SVS4 291 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 SDE2Q6IQ49 451 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 CASP12Q6UXS9 341 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 Q6ZPB1 254 aaPredicted RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 SFTPA1Q8IWL2 248 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 SAMD14Q8IZD0 417 aaPredicted RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 B3GNT7Q8NFL0 401 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 OR2L5Q8NG80 312 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 GPR32P1Q8NGA4 272 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 OR8J1Q8NGP2 316 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 SUN3Q8TAQ9 357 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 ITPKCQ96DU7 683 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 TREX2Q9BQ50 279 aaPredicted RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 RHNO1Q9BSD3 238 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 SLC17A9Q9BYT1 436 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 ROGDIQ9GZN7 287 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 OR51I1Q9H343 314 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 GLIPR2Q9H4G4 154 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 KIR3DX1Q9H7L2 352 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 IMP3Q9NV31 184 aaKnown RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 GPR83Q9NYM4 423 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 LIPT1Q9Y234 373 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 IRGMA1A4Y4 181 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 FFAR1O14842 300 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 MAGEB3O15480 346 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 PLRG1O43660 514 aaKnown RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 ASNA1O43681 348 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 LCMT2O60294 686 aaKnown RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 OR10H3O60404 316 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 PAK4O96013 591 aaPredicted RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 CEACAM5P06731 702 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 CA3P07451 260 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 FHP07954 510 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 HIST1H1TP22492 207 aaPredicted RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 PSMB5P28074 263 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 CNR2P34972 360 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 SLC15A1P46059 708 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 RGS6P49758 472 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 NCBP2P52298 156 aaKnown RBP eCLIP17.1■□□□□ 0.33
CD40-201ENST00000372276 LIM2P55344 173 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 LSM3P62310 102 aaKnown RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 MLF2Q15773 248 aaPredicted RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 OCLNQ16625 522 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 ARMCX4Q5H9R4 360 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 MRM1Q6IN84 353 aaKnown RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 MFSD4AQ8N468 514 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 MFSD9Q8NBP5 474 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 KLHL6Q8WZ60 621 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 NXF2Q9GZY0 626 aaKnown RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 DSN1Q9H410 356 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 C3orf14Q9HBI5 128 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 PRDM9Q9NQV7 894 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 ZCCHC3Q9NUD5 404 aaKnown RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 DNAAF2Q9NVR5 837 aaKnown RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 TEX10Q9NXF1 929 aaPredicted RBP17.1■□□□□ 0.33
CD40-201ENST00000372276 REV1Q9UBZ9 1251 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 WDR37Q9Y2I8 494 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 UGT2A1Q9Y4X1 527 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 OR1A2Q9Y585 309 aa17.1■□□□□ 0.33
CD40-201ENST00000372276 CCDC88CQ9P219 2028 aa17.09■□□□□ 0.33
CD40-201ENST00000372276 PNMA8CA0A1B0GUJ8 204 aa17.09■□□□□ 0.33
CD40-201ENST00000372276 A0A1W2PP55 124 aa17.09■□□□□ 0.33
CD40-201ENST00000372276 FUOMA2VDF0 154 aa17.09■□□□□ 0.33
CD40-201ENST00000372276 SYT5O00445 386 aa17.09■□□□□ 0.33
CD40-201ENST00000372276 PRICKLE3O43900 615 aaPredicted RBP17.09■□□□□ 0.33
CD40-201ENST00000372276 SERPIND1P05546 499 aa17.09■□□□□ 0.33
CD40-201ENST00000372276 CSNK2A2P19784 350 aaPredicted RBP17.09■□□□□ 0.33
CD40-201ENST00000372276 S100A5P33763 92 aa17.09■□□□□ 0.33
CD40-201ENST00000372276 MPIP34949 423 aa17.09■□□□□ 0.33
CD40-201ENST00000372276 SOX6P35712 828 aa17.09■□□□□ 0.33
CD40-201ENST00000372276 XKP51811 444 aa17.09■□□□□ 0.33
CD40-201ENST00000372276 ZNF45Q02386 682 aa17.09■□□□□ 0.33
CD40-201ENST00000372276 KRR1Q13601 381 aaKnown RBP17.09■□□□□ 0.33
CD40-201ENST00000372276 RPS26P11Q5JNZ5 115 aaPredicted RBP17.09■□□□□ 0.33
CD40-201ENST00000372276 C12orf73Q69YU5 71 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms