RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 SPANXN2Q5MJ10 180 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 NXNL2Q5VZ03 156 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TBC1D3GQ6DHY5 549 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TBC1D3CQ6IPX1 549 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 LYPD8Q6UX82 237 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 GALNT10Q86SR1 603 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 FAM124AQ86V42 546 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 HIPK1Q86Z02 1210 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 LIX1LQ8IVB5 337 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TBC1D3Q8IZP1 549 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 OR4K1Q8NGD4 311 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 OR52E4Q8NGH9 312 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 OR5H6Q8NGV6 325 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 SETD7Q8WTS6 366 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 DMRTB1Q96MA1 342 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 PHPT1Q9NRX4 125 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 EXD2Q9NVH0 621 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TOR4AQ9NXH8 423 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 PLEKHM1Q9Y4G2 1056 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 PCDHGB2Q9Y5G2 931 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 A0A0G2JMP0 313 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 KLK1P06870 262 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 RETP07949 1114 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 NTSR1P30989 418 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 FMO3P31513 532 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 DCTP40126 519 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 TAGLNQ01995 201 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 ZNF763Q0D2J5 394 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 Q5BKY6 102 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 SDE2Q6IQ49 451 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 LCTLQ6UWM7 567 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 UTS2BQ765I0 119 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 GLRX5Q86SX6 157 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 VPS37AQ8NEZ2 397 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 C12orf66Q96MD2 445 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 SORBS1Q9BX66 1292 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 SLC17A9Q9BYT1 436 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 AASDHPPTQ9NRN7 309 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 CUEDC1Q9NWM3 386 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 EXO1Q9UQ84 846 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 LYVE1Q9Y5Y7 322 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 CKAP5Q14008 2032 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 DSCR3O14972 297 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 SLC31A1O15431 190 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 ZNF682O95780 498 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 EGFP01133 1207 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 RPN2P04844 631 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 NAGAP17050 411 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 C21orf58P58505 322 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 TCEA2Q15560 299 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 SERPINA11Q86U17 422 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 C17orf64Q86WR6 236 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 HS3ST5Q8IZT8 346 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 CACTIN-AS1Q8N1I8 211 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 IL17RCQ8NAC3 791 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 ZNF540Q8NDQ6 660 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 FERD3LQ96RJ6 166 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 SIGLEC11Q96RL6 698 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 AIFM2Q9BRQ8 373 aa16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 IMP3Q9NV31 184 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-205ENST00000594973 A0A1W2PQ72 361 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 RNGTTO60942 597 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 HOXB2P14652 356 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 COL9A1P20849 921 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 CTSKP43235 329 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 AGERQ15109 404 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 ZNF385BQ569K4 471 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 POP5Q969H6 163 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 CITED4Q96RK1 184 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 C1QTNF2Q9BXJ5 285 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 TPT1P8Q9HAU6 139 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 SPASTQ9UBP0 616 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 FBXO9Q9UK97 447 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 NUP50Q9UKX7 468 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 FEZF1A0PJY2 475 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 OR5K3A6NET4 321 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 C12orf71A8MTZ7 269 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 H7BY64 318 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 hCG_2039718K7EN88 272 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 KCNK5O95279 499 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 KLF8O95600 359 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 DBTP11182 482 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 ADPRHP54922 357 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 CASP9P55211 416 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 TAS2R50P59544 299 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 GAB1Q13480 694 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 ESCO2Q56NI9 601 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 XKRXQ6PP77 449 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 ANGPTL8Q6UXH0 198 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 CCDC190Q86UF4 302 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 FAM129CQ86XR2 697 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 KRT78Q8N1N4 520 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 TOR1AIP2Q8NFQ8 470 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 OR4A15Q8NGL6 344 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 UBE2E3Q969T4 207 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 PRAP1Q96NZ9 151 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 INSM2Q96T92 566 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 XKR8Q9H6D3 395 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 RNF6Q9Y252 685 aa16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 PCDHB11Q9Y5F2 797 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms