RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 A0A1W2PR48 441 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 FAM166BA8MTA8 275 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 HRKO00198 91 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 PPP6CO00743 305 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 PRRG2O14669 202 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 ZNF500O60304 480 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 PDE9AO76083 593 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 GPR75O95800 540 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 AIFM1O95831 613 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 OTCP00480 354 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 KLK1P06870 262 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 RPS17P08708 135 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 TAC1P20366 129 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 HERVK_113P63132 956 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 ERVK-8P63133 956 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 ASPHQ12797 758 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 ZNF267Q14586 743 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 MRM1Q6IN84 353 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 OPN5Q6U736 354 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 C3P1Q6ZMU1 363 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 RTL4Q6ZR62 310 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 ST13P4Q8IZP2 240 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 ZNF808Q8N4W9 903 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 TRPC4APQ8TEL6 797 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 ZNF483Q8TF39 744 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 MZB1Q8WU39 189 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 RIT1Q92963 219 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 UCN3Q969E3 161 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 GAL3ST4Q96RP7 486 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 PELOQ9BRX2 385 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 ERVK-6Q9BXR3 956 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 MRPL1Q9BYD6 325 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 DEPPQ9NTK1 212 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 PSD3Q9NYI0 1048 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 AHSPQ9NZD4 102 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 FETUBQ9UGM5 382 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 SLC12A4Q9UP95 1085 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 ERVK-19Q9WJR5 959 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 ZNF835Q9Y2P0 537 aa11.77□□□□□ -0.53
NPLOC4-213ENST00000573519 A0A1B0GTH9 108 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 A0A1B0GTL3 188 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 PINLYPA6NC86 204 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 ACOT7O00154 380 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 DLX3O60479 287 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 SUPT7LO94864 414 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 SEMA3DO95025 777 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 SLU7O95391 586 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 PDYNP01213 254 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 TPOP07202 933 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 PIK3R1P27986 724 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 PTGS2P35354 604 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 HSD17B3P37058 310 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 SMSP52788 366 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 GGTA1PQ4G0N0 100 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 CCNYL2Q5T2Q4 361 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 SP5Q6BEB4 398 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 OR52E8Q6IFG1 317 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 LETMD1Q6P1Q0 360 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 RPTNQ6XPR3 784 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 RNF111Q6ZNA4 994 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 Q6ZPB1 254 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 FAM47EQ6ZV65 393 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 NCCRP1Q6ZVX7 275 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 SLC29A4Q7RTT9 530 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 PAGE2Q7Z2X7 111 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 C9orf40Q8IXQ3 194 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 ZFP62Q8NB50 900 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 OR2M7Q8NG81 312 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 OR52N2Q8NGI0 321 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 OR2W6PQ8NHA6 318 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 C16orf52Q8NHV5 167 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 SLC22A8Q8TCC7 542 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 EPS8L3Q8TE67 593 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 AGAP11Q8TF27 550 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 SELENOMQ8WWX9 145 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 FBXL20Q96IG2 436 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 DEFB127Q9H1M4 99 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 FARSBQ9NSD9 589 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 TEX10Q9NXF1 929 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 SNX6Q9UNH7 406 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 MEMO1Q9Y316 297 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 HIVEP3Q5T1R4 2406 aa11.76□□□□□ -0.53
NPLOC4-213ENST00000573519 A0A0G2JMM0 328 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 A0A1W2PPB8 328 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 A0A1W2PRS3 328 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 KIR3DP1A8MWS1 328 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 ESPNB1AK53 854 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 PGRMC2O15173 223 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 ZNF354AO60765 605 aaPredicted RBP11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 OR4F21O95013 312 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 IGKV3-11P04433 115 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 P04436 131 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 CNR1P21554 472 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 MAPK12P53778 367 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 PPIAP62937 165 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 ADORA2A-AS1P86434 159 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 CLCQ05315 142 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 MPEG1Q2M385 716 aa11.75□□□□□ -0.53
NPLOC4-213ENST00000573519 SPRED3Q2MJR0 410 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms