RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ACSL6Q9UKU0 697 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 NAALAD2Q9Y3Q0 740 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 V9GYQ6 96 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 TNRC6BQ9UPQ9 1833 aaKnown RBP13.01□□□□□ -0.33
TPM1-215ENST00000558868 TMEM131Q92545 1883 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 EPG5Q9HCE0 2579 aa13.01□□□□□ -0.33
TPM1-215ENST00000558868 C5orf58C9J3I9 102 aa13□□□□□ -0.33
TPM1-215ENST00000558868 EMC8O43402 210 aa13□□□□□ -0.33
TPM1-215ENST00000558868 SLITRK5O94991 958 aa13□□□□□ -0.33
TPM1-215ENST00000558868 BMP10O95393 424 aa13□□□□□ -0.33
TPM1-215ENST00000558868 ZNF682O95780 498 aa13□□□□□ -0.33
TPM1-215ENST00000558868 CER1O95813 267 aa13□□□□□ -0.33
TPM1-215ENST00000558868 C9P02748 559 aa13□□□□□ -0.33
TPM1-215ENST00000558868 CFIP05156 583 aa13□□□□□ -0.33
TPM1-215ENST00000558868 FHP07954 510 aa13□□□□□ -0.33
TPM1-215ENST00000558868 GIMD1P0DJR0 217 aa13□□□□□ -0.33
TPM1-215ENST00000558868 PPP2R1BP30154 601 aa13□□□□□ -0.33
TPM1-215ENST00000558868 KHKP50053 298 aa13□□□□□ -0.33
TPM1-215ENST00000558868 GFERP55789 205 aa13□□□□□ -0.33
TPM1-215ENST00000558868 RAB38P57729 211 aa13□□□□□ -0.33
TPM1-215ENST00000558868 CDK6Q00534 326 aa13□□□□□ -0.33
TPM1-215ENST00000558868 FAM53BQ14153 422 aa13□□□□□ -0.33
TPM1-215ENST00000558868 GNA13Q14344 377 aa13□□□□□ -0.33
TPM1-215ENST00000558868 HLA-BQ31612 363 aa13□□□□□ -0.33
TPM1-215ENST00000558868 SFT2D3Q587I9 215 aa13□□□□□ -0.33
TPM1-215ENST00000558868 COX20Q5RI15 118 aa13□□□□□ -0.33
TPM1-215ENST00000558868 WDR74Q6RFH5 385 aaPredicted RBP13□□□□□ -0.33
TPM1-215ENST00000558868 ENPP6Q6UWR7 440 aa13□□□□□ -0.33
TPM1-215ENST00000558868 CEACAM20Q6UY09 585 aa13□□□□□ -0.33
TPM1-215ENST00000558868 ZBTB49Q6ZSB9 765 aa13□□□□□ -0.33
TPM1-215ENST00000558868 USP53Q70EK8 1073 aa13□□□□□ -0.33
TPM1-215ENST00000558868 CBLL1Q75N03 491 aa13□□□□□ -0.33
TPM1-215ENST00000558868 CCDC80Q76M96 950 aa13□□□□□ -0.33
TPM1-215ENST00000558868 KANSL1Q7Z3B3 1105 aa13□□□□□ -0.33
TPM1-215ENST00000558868 PATL1Q86TB9 770 aaKnown RBP13□□□□□ -0.33
TPM1-215ENST00000558868 KBTBD2Q8IY47 623 aa13□□□□□ -0.33
TPM1-215ENST00000558868 CCDC116Q8IYX3 515 aa13□□□□□ -0.33
TPM1-215ENST00000558868 LRRC25Q8N386 305 aaPredicted RBP13□□□□□ -0.33
TPM1-215ENST00000558868 TTC29Q8NA56 475 aaPredicted RBP13□□□□□ -0.33
TPM1-215ENST00000558868 OR4C6Q8NH72 309 aa13□□□□□ -0.33
TPM1-215ENST00000558868 SAP25Q8TEE9 199 aa13□□□□□ -0.33
TPM1-215ENST00000558868 KLHL6Q8WZ60 621 aa13□□□□□ -0.33
TPM1-215ENST00000558868 LZICQ8WZA0 190 aa13□□□□□ -0.33
TPM1-215ENST00000558868 UCN3Q969E3 161 aa13□□□□□ -0.33
TPM1-215ENST00000558868 CNRIP1Q96F85 164 aaPredicted RBP13□□□□□ -0.33
TPM1-215ENST00000558868 SLC35G5Q96KT7 338 aa13□□□□□ -0.33
TPM1-215ENST00000558868 ZNF681Q96N22 645 aa13□□□□□ -0.33
TPM1-215ENST00000558868 ZCCHC3Q9NUD5 404 aaKnown RBP13□□□□□ -0.33
TPM1-215ENST00000558868 GPATCH2Q9NW75 528 aa13□□□□□ -0.33
TPM1-215ENST00000558868 IRAK4Q9NWZ3 460 aa13□□□□□ -0.33
TPM1-215ENST00000558868 DNAJB9Q9UBS3 223 aa13□□□□□ -0.33
TPM1-215ENST00000558868 BAG5Q9UL15 447 aa13□□□□□ -0.33
TPM1-215ENST00000558868 SLC6A14Q9UN76 642 aa13□□□□□ -0.33
TPM1-215ENST00000558868 CLCA2Q9UQC9 943 aa13□□□□□ -0.33
TPM1-215ENST00000558868 CFAP47Q6ZTR5 3102 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 MN1Q10571 1320 aaPredicted RBP12.99□□□□□ -0.33
TPM1-215ENST00000558868 TOX3O15405 576 aaPredicted RBP12.99□□□□□ -0.33
TPM1-215ENST00000558868 SUV39H1O43463 412 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 KIF1CO43896 1103 aaKnown RBP12.99□□□□□ -0.33
TPM1-215ENST00000558868 PRKRAO75569 313 aaKnown RBP12.99□□□□□ -0.33
TPM1-215ENST00000558868 PDE9AO76083 593 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 SYPP08247 313 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 IFI6P09912 130 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 NUDT7P0C024 238 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 FEN1P39748 380 aaKnown RBP12.99□□□□□ -0.33
TPM1-215ENST00000558868 AVPR1BP47901 424 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 GABRA4P48169 554 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 XKP51811 444 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 HSD11B2P80365 405 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 SQSTM1Q13501 440 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 TP53BP2Q13625 1128 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 GRM7Q14831 915 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 DEFB110Q30KQ9 67 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 INAVAQ3KP66 663 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.99□□□□□ -0.33
TPM1-215ENST00000558868 NKAIN2Q5VXU1 208 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 REEP3Q6NUK4 255 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 PPP4R4Q6NUP7 873 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 FAM180BQ6P0A1 224 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 DGLUCYQ7Z3D6 616 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 PRSS42Q7Z5A4 293 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 ZC3H7AQ8IWR0 971 aaKnown RBP12.99□□□□□ -0.33
TPM1-215ENST00000558868 CA13Q8N1Q1 262 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 FAM181AQ8N9Y4 354 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 C10orf90Q96M02 699 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 DPYSL5Q9BPU6 564 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 ENAMQ9NRM1 1142 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 SEMA5BQ9P283 1151 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 RAB26Q9ULW5 256 aa12.99□□□□□ -0.33
TPM1-215ENST00000558868 MRPS33Q9Y291 106 aaKnown RBP12.99□□□□□ -0.33
TPM1-215ENST00000558868 MRPS2Q9Y399 296 aaKnown RBP12.99□□□□□ -0.33
TPM1-215ENST00000558868 NUP214P35658 2090 aaPredicted RBP12.98□□□□□ -0.33
TPM1-215ENST00000558868 IGHV5-51A0A0C4DH38 117 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 HYKKA2RU49 373 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 FITM1A5D6W6 292 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 GNGT2O14610 69 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 B4GAT1O43505 415 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 PRSS23O95084 383 aa12.98□□□□□ -0.33
TPM1-215ENST00000558868 NSA2O95478 260 aaKnown RBP12.98□□□□□ -0.33
TPM1-215ENST00000558868 CST1P01037 141 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms