RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 EIF5A2Q9GZV4 153 aaKnown RBP9.56□□□□□ -0.88
COL4A6-208ENST00000538570 SMOC2Q9H3U7 446 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF696Q9H7X3 374 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 TDP1Q9NUW8 608 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 IFNA1P01562 189 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 MT-ND2P03891 347 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 ZBTB48P10074 688 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-208ENST00000538570 FECHP22830 423 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 GKN2Q86XP6 184 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 THAP4Q8WY91 577 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 ST8SIA2Q92186 375 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 SLC6A7Q99884 636 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 IFT22Q9H7X7 185 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 NLE1Q9NVX2 485 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-208ENST00000538570 SRRDQ9UH36 339 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 NUFIP1Q9UHK0 495 aaKnown RBP9.56□□□□□ -0.88
COL4A6-208ENST00000538570 FAAHO00519 579 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 MMP20O60882 483 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 OR1E2P47887 323 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 ACTC1P68032 377 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 ACTA1P68133 377 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 COL28A1Q2UY09 1125 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 OR8J3Q8NGG0 315 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 RPLP0P6Q8NHW5 317 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 C7orf34Q96L11 122 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 TSGA13Q96PP4 275 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 KRBA1A5PL33 1030 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 BHMG1C9JSJ3 638 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-208ENST00000538570 F8W036 122 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 SBK2P0C263 348 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 FAM163BP0C2L3 166 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 GDI1P31150 447 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 BLOC1S1P78537 153 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 ANKRD54Q6NXT1 300 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 ACTR6Q9GZN1 396 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF701Q9NV72 531 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-208ENST00000538570 TMEM88BA6NKF7 163 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 DNAJB5O75953 348 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 HPRP00739 348 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 PIGRP01833 764 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 H2BFMP0C1H6 154 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 H2AFB2P0C5Z0 115 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 DPP6P42658 865 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 FRKP42685 505 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-208ENST00000538570 MAGEA11P43364 429 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 PMS2P3Q13401 168 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 FLYWCH1Q4VC44 716 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 LIPKQ5VXJ0 399 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF776Q68DI1 518 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-208ENST00000538570 RPL13AP3Q6NVV1 102 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 KCTD18Q6PI47 426 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-208ENST00000538570 SLC16A9Q7RTY1 509 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 OR5B12Q96R08 314 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 SYT4Q9H2B2 425 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 MGAT4CQ9UBM8 478 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 DHDHQ9UQ10 334 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 K7EPK0 472 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 EIF3FO00303 357 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-208ENST00000538570 SLC26A5P58743 744 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 PLP2Q04941 152 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 ITPRIPL2Q3MIP1 535 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 DCST2Q5T1A1 773 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 ATG9BQ674R7 924 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 GTF2IRD2BQ6EKJ0 949 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 TXNRD3NBQ6F5E7 133 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 GTF2IRD2Q86UP8 949 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 CARM1Q86X55 608 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 FAM71E2Q8N5Q1 922 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 CELF5Q8N6W0 485 aaKnown RBP9.55□□□□□ -0.88
COL4A6-208ENST00000538570 DBF4BQ8NFT6 615 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 OR10T2Q8NGX3 314 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 RAD9AQ99638 391 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 CCDC106Q9BWC9 280 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 KCNH6Q9H252 994 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 ERVK13-1Q9NX77 482 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 ZFR2Q9UPR6 939 aaKnown RBP9.55□□□□□ -0.88
COL4A6-208ENST00000538570 A6NHS1 94 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 UNC119BA6NIH7 251 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF821O75541 412 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-208ENST00000538570 RASAL1O95294 804 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 HRGP04196 525 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 CD3GP09693 182 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 CELP19835 753 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 ETV3P41162 512 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 MAP2K4P45985 399 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 GALNT2Q10471 571 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 DYRK1AQ13627 763 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 SLC27A4Q6P1M0 643 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 RPS27LQ71UM5 84 aaKnown RBP9.55□□□□□ -0.88
COL4A6-208ENST00000538570 OR2T33Q8NG76 320 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 TMEM125Q96AQ2 219 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 TMEM175Q9BSA9 504 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 NSUN3Q9H649 340 aaKnown RBP9.55□□□□□ -0.88
COL4A6-208ENST00000538570 FBXL12Q9NXK8 326 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 SERTAD3Q9UJW9 196 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 SLC7A11Q9UPY5 501 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 MRC1P22897 1456 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 KCNJ13O60928 360 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 GRIA2P42262 883 aa9.55□□□□□ -0.88
COL4A6-208ENST00000538570 DHPSP49366 369 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms