RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 GSN-AS1Q9NRJ2 163 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 INTS10Q9NVR2 710 aaKnown RBP4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 SMARCAL1Q9NZC9 954 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 C1RLQ9NZP8 487 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 DENND4CQ5VZ89 1909 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 TRBV2A0A0J9YWF9 115 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 KRT87PA6NCN2 255 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 BECN2A8MW95 431 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 CPLX1O14810 134 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 PRPSAP2O60256 369 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 JAK2O60674 1132 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 ZG16O60844 167 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 SDC3O75056 442 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 RBMXL2O75526 392 aaKnown RBP4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 PDE9AO76083 593 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 ACSL3O95573 720 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 ARF4P18085 180 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 CYP11B2P19099 503 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 ITGA3P26006 1051 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 CD38P28907 300 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 CDC25AP30304 524 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 NMT1P30419 496 aaKnown RBP4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 TNFRSF4P43489 277 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 BRCC3P46736 316 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 ZNF81P51508 661 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 PDX1P52945 283 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 MTCP1P56278 107 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 PTENP60484 403 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 COG7P83436 770 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 IL1RL1Q01638 556 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 SULT2A1Q06520 285 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 KLC1Q07866 573 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 C17orf67Q0P5P2 114 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 DEFB109BQ30KR1 87 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 MCMDC2Q4G0Z9 681 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 IQCCQ4KMZ1 466 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 AARDQ4LEZ3 155 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 SYT14P1Q58G82 188 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 GRTP1Q5TC63 336 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 PACS1Q6VY07 963 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 COLCA1Q6ZS62 124 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 SLC9B2Q86UD5 537 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 ZFAND4Q86XD8 727 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 FAM219AQ8IW50 185 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 Q8N1X5 172 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 GBGT1Q8N5D6 347 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 ARL6IP6Q8N6S5 226 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 RASGEF1AQ8N9B8 481 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 L3MBTL4Q8NA19 623 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 OR5M8Q8NGP6 311 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 PIBF1Q8WXW3 757 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 PROX1Q92786 737 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 TANKQ92844 425 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 SEMA4DQ92854 862 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 DAZLQ92904 295 aaKnown RBP4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 PSMG2Q969U7 264 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 PGM2Q96G03 612 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 CPB2Q96IY4 423 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 ATG101Q9BSB4 218 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 NUP58Q9BVL2 599 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 MTMR12Q9C0I1 747 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 LINC00597Q9H2U6 94 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 C6orf106Q9H6K1 298 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 SLA2Q9H6Q3 261 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 SERINC1Q9NRX5 453 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 NRBP2Q9NSY0 501 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 PDRG1Q9NUG6 133 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 ZNF224Q9NZL3 707 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 PISDQ9UG56 409 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 SIX4Q9UIU6 781 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 ASB3Q9Y575 518 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 SPIN1Q9Y657 262 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 PLXNA2O75051 1894 aa4.35□□□□□ -1.71
HMGB1P23-201ENST00000518743 TNRC6AQ8NDV7 1962 aaKnown RBP4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 IGKV6D-21A0A0A0MT36 114 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 FEZF1A0PJY2 475 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 SOCS2O14508 198 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 NDC80O14777 642 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 TTI1O43156 1089 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 ST8SIA3O43173 380 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 ZNHIT1O43257 154 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 MOCS2O96007 188 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 CCNE2O96020 404 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 PLGP00747 810 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 PRSS2P07478 247 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 TCF4P15884 667 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 CORO1AP31146 461 aaKnown RBP4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 AHRP35869 848 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 NOVP48745 357 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 TPMTP51580 245 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 LUMP51884 338 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 SLC12A3P55017 1021 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 TPD52P55327 224 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 UBASH3AP57075 661 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 MAT1AQ00266 395 aaKnown RBP4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 TSTA3Q13630 321 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 PPA1Q15181 289 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 MAPK11Q15759 364 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 IFI44LQ53G44 452 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms