RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PCDHGA5Q9Y5G8 931 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 ABCA8O94911 1581 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 RGS9O75916 674 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-201ENST00000331920 SOX30O94993 753 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 TGM1P22735 817 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 CHATP28329 748 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 ZNF648Q5T619 568 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-201ENST00000331920 PAQR5Q9NXK6 330 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-201ENST00000331920 ARVCFO00192 962 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 SLC31A2O15432 143 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 HTR3BO95264 441 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 MEF2AQ02078 507 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-201ENST00000331920 DPY19L1Q2PZI1 675 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 XKR5Q6UX68 686 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 OR51D1Q8NGF3 324 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 NAA11Q9BSU3 229 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-201ENST00000331920 FN3KRPQ9HA64 309 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 ENSAO43768 121 aaKnown RBP15.76■□□□□ 0.11
PTCH1-201ENST00000331920 NKX2-5P52952 324 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-201ENST00000331920 IL10RBQ08334 325 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 TMEM205Q6UW68 189 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 GID4Q8IVV7 300 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 SMG8Q8ND04 991 aaKnown RBP15.76■□□□□ 0.11
PTCH1-201ENST00000331920 SH3RF2Q8TEC5 729 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 TMEM234Q8WY98 164 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 KLHL42Q9P2K6 505 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 ACAD8Q9UKU7 415 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 CRTAPO75718 401 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-201ENST00000331920 PNMTP11086 282 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 GDF5P43026 501 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 LTC4SQ16873 150 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 LHX5Q9H2C1 402 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 OR6C65A6NJZ3 312 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 BHLHE40O14503 412 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 PAX6P26367 422 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 CSNK2A1P68400 391 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-201ENST00000331920 CYBRD1Q53TN4 286 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 PM20D2Q8IYS1 436 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 CSNK2A3Q8NEV1 391 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 OR51A7Q8NH64 312 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 GATA5Q9BWX5 397 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-201ENST00000331920 ACSL5Q9ULC5 683 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 SPATA31A1Q5TZJ5 1347 aa15.76■□□□□ 0.11
PTCH1-201ENST00000331920 GRM2Q14416 872 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 GPRC6AQ5T6X5 926 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 KIAA1614Q5VZ46 1190 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 SFRP4Q6FHJ7 346 aaPredicted RBP15.75■□□□□ 0.11
PTCH1-201ENST00000331920 RSC1A1Q92681 617 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 PTERQ96BW5 349 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 FZD10Q9ULW2 581 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 GXYLT2A0PJZ3 443 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 CREG1O75629 220 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 SOX3P41225 446 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 CDKN2BP42772 138 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 TGFBIQ15582 683 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 ZFP41Q8N8Y5 198 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 MOAP1Q96BY2 351 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 CD320Q9NPF0 282 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 TESQ9UGI8 421 aaKnown RBP15.75■□□□□ 0.11
PTCH1-201ENST00000331920 EXOSC1Q9Y3B2 195 aaKnown RBP15.75■□□□□ 0.11
PTCH1-201ENST00000331920 PIGFQ07326 219 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 FXNQ16595 210 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 TXNDC8Q6A555 127 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 TIGD3Q6B0B8 471 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 IL1F10Q8WWZ1 152 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 OR4K3Q96R72 315 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 FAM234AQ9H0X4 552 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 SUV39H2Q9H5I1 410 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 ZDHHC3Q9NYG2 299 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 DNAJB11Q9UBS4 358 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 SCAF4O95104 1147 aaKnown RBP15.75■□□□□ 0.11
PTCH1-201ENST00000331920 CSTAP01040 98 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 AMY2AP04746 511 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 POU6F2P78424 691 aaPredicted RBP15.75■□□□□ 0.11
PTCH1-201ENST00000331920 TAC4Q86UU9 113 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 SYNPO2LQ9H987 977 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 ZNF358Q9NW07 568 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 KLHL13Q9P2N7 655 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 A6NL46 340 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 UBFD1O14562 309 aaKnown RBP15.75■□□□□ 0.11
PTCH1-201ENST00000331920 TREML2Q5T2D2 321 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 SKA3Q8IX90 412 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 CD99L2Q8TCZ2 262 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 MEIS3P1A6NDR6 274 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 CILPO75339 1184 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 F2RP25116 425 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 TAS2R20P59543 309 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 SUMF2Q8NBJ7 301 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 KREMEN2Q8NCW0 462 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 SLC2A12Q8TD20 617 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 NTAN1Q96AB6 310 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 TWNKQ96RR1 684 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 SRRDQ9UH36 339 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 PCDH17O14917 1159 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 RHCEP18577 417 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 FBLP22087 321 aaKnown RBP15.75■□□□□ 0.11
PTCH1-201ENST00000331920 PBX2P40425 430 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 ZNF718Q3SXZ3 478 aa15.75■□□□□ 0.11
PTCH1-201ENST00000331920 KCTD18Q6PI47 426 aaPredicted RBP15.75■□□□□ 0.11
PTCH1-201ENST00000331920 KLBQ86Z14 1044 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms