RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 GFPT1Q06210 699 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 ELAVL3Q14576 367 aaKnown RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 RBBP5Q15291 538 aaKnown RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 SYCP1Q15431 976 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 CCDC6Q16204 474 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 ASTE1Q2TB18 679 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 TTC31Q49AM3 519 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 C9orf64Q5T6V5 341 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZNF776Q68DI1 518 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 KIAA0930Q6ICG6 404 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 TCEAL6Q6IPX3 200 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 PPP1R2P3Q6NXS1 205 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 TMEM154Q6P9G4 183 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 CFAP77Q6ZQR2 320 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 KCTD8Q6ZWB6 473 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 STRADAQ7RTN6 431 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 GLRX5Q86SX6 157 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 SETD3Q86TU7 594 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 CCDC190Q86UF4 302 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 PHF13Q86YI8 300 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 CTAGE4Q8IX94 777 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 APCDD1Q8J025 514 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 LGI2Q8N0V4 545 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 CIARTQ8N365 385 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 CARNMT1Q8N4J0 409 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 LMNTD1Q8N9Z9 388 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 DMBX1Q8NFW5 382 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 TCEAL3Q969E4 200 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 NTAN1Q96AB6 310 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 PGAM5Q96HS1 289 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 SPAG5Q96R06 1193 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 NUDCD1Q96RS6 583 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 CHCHD6Q9BRQ6 235 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 FEM1AQ9BSK4 669 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 SYT11Q9BT88 431 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 FUCA2Q9BTY2 467 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 GPR174Q9BXC1 333 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 EDEM3Q9BZQ6 932 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 NAT10Q9H0A0 1025 aaKnown RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 PLK3Q9H4B4 646 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 SYNCQ9H7C4 482 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 SDF2L1Q9HCN8 221 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZFP57Q9NU63 452 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 TAB2Q9NYJ8 693 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 BAHCC1Q9P281 2608 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 FBXL17Q9UF56 701 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 XPO7Q9UIA9 1087 aaKnown RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 HS3ST2Q9Y278 367 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 AKAP13Q12802 2813 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 LRP4O75096 1905 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 RP1P56715 2156 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 ASXL3Q9C0F0 2248 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 CHD6Q8TD26 2715 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 FAM208BQ5VWN6 2430 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 ILVBLA1L0T0 632 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 OR5K3A6NET4 321 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 LRRC72A6NJI9 287 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 SIGLEC16A6NMB1 481 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 E9PAM4 449 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 PTGES3LE9PB15 166 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 PES1O00541 588 aaKnown RBP3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 MCF2LO15068 1137 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 VILLO15195 856 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 EPHB6O15197 1021 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 LATO43561 262 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 PLPP2O43688 288 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 DFNA5O60443 496 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 DOK2O60496 412 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 GRAP2O75791 330 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZMPSTE24O75844 475 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 GFPT2O94808 682 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 ADCY5O95622 1261 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 SEMA4FO95754 770 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 IGKV3-20P01619 116 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 CALB1P05937 261 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 IGHV4-34P06331 123 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 GZMAP12544 262 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 CD59P13987 128 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 FERP16591 822 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 GOT1P17174 413 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 GM2AP17900 193 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 GABRB1P18505 474 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 HRH2P25021 359 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 CD27P26842 260 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 ACSL1P33121 698 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 RDXP35241 583 aaKnown RBP3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 DRD3P35462 400 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 HADHAP40939 763 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 PRKCIP41743 596 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 KLK7P49862 253 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 SULT1E1P49888 294 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 GPR143P51810 404 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 ATXN3P54252 364 aaPredicted RBP3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 AIF1P55008 147 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 KRT83P78385 493 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 UBXN1Q04323 297 aa3.39□□□□□ -1.87
CKS1BP3-201ENST00000600888 OVGP1Q12889 678 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms