RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 B4E171 279 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 FAM227AF5H4B4 570 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 TMX2-CTNND1H3BSU7 103 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 NME4O00746 187 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 TIAF1O95411 115 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 ONECUT2O95948 504 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 GSNP06396 782 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 CDK4P11802 303 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 TSPAN7P41732 249 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 SLC7A2P52569 658 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 HBA1P69905 142 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 SIM1P81133 766 aaPredicted RBP13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 MAT1AQ00266 395 aaKnown RBP13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 DUSP2Q05923 314 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 SELPLGQ14242 412 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 IL11RAQ14626 422 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 SYT16Q17RD7 645 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 ISXQ2M1V0 245 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 SPATS1Q496A3 300 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 RABL3Q5HYI8 236 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 PWWP2BQ6NUJ5 590 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 CYB5D1Q6P9G0 228 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 DNAJC14Q6Y2X3 702 aaPredicted RBP13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 GPR155Q7Z3F1 870 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 SCUBE1Q8IWY4 988 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 METTL27Q8N6F8 245 aaPredicted RBP13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 OR4A15Q8NGL6 344 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 SUN3Q8TAQ9 357 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 TANKQ92844 425 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 MMABQ96EY8 250 aaPredicted RBP13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 AMDHD1Q96NU7 426 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 GBP5Q96PP8 586 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 PANX1Q96RD7 426 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 GLIPR2Q9H4G4 154 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 APMAPQ9HDC9 416 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 TAS2R9Q9NYW1 312 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 DHCR7Q9UBM7 475 aaKnown RBP13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 PSME2Q9UL46 239 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 AHCTF1Q8WYP5 2266 aa13.88□□□□□ -0.19
SHKBP1-211ENST00000595945 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 A0A1W2PS29 197 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 TM4SF5O14894 197 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 ERAL1O75616 437 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 MT-CO3P00414 261 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 CCL4P13236 92 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 CSNK2A2P19784 350 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 CSRP1P21291 193 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 NTSP30990 170 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 OR1D4P47884 311 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 EEFSECP57772 596 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 IGLV3-21P80748 117 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 NHLH1Q02575 133 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 GAB1Q13480 694 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 DSG2Q14126 1118 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 ZNF750Q32MQ0 723 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 SAMD4BQ5PRF9 694 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 ZNF385CQ66K41 422 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 FAM180BQ6P0A1 224 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 ZNF551Q7Z340 670 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 SLCO6A1Q86UG4 719 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 PPP1R3BQ86XI6 285 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 ZNF595Q8IYB9 648 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 FBXW8Q8N3Y1 598 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 DEFB124Q8NES8 71 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 OR4K14Q8NGD5 310 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 OR51Q1Q8NH59 317 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 ZFP90Q8TF47 636 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 ANKRD9Q96BM1 317 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 ZBED6CLQ96FA7 236 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 LIN37Q96GY3 246 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 PEX11GQ96HA9 241 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 IKZF5Q9H5V7 419 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 EPS8L2Q9H6S3 715 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 LANCL2Q9NS86 450 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 SIRT3Q9NTG7 399 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 GIMAP4Q9NUV9 329 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 SLC7A8Q9UHI5 535 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 VPS4AQ9UN37 437 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 ENTPD4Q9Y227 616 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 MAP4K5Q9Y4K4 846 aa13.87□□□□□ -0.19
SHKBP1-211ENST00000595945 FGF17O60258 216 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 SCRG1O75711 98 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 PDE5AO76074 875 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 GPR75O95800 540 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 HBQ1P09105 142 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 HSD17B1P14061 328 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 CPMP14384 443 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 ALAS2P22557 587 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 CDK9P50750 372 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 XKP51811 444 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 MANFP55145 182 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 CCDC157Q569K6 752 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 CPZQ66K79 652 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 ZNF621Q6ZSS3 439 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 COX15Q7KZN9 410 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 HPS6Q86YV9 775 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 TMEM126BQ8IUX1 230 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 SAMD14Q8IZD0 417 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms