RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ZNF717Q9BY31 904 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 DMRT3Q9NQL9 472 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 TAS2R9Q9NYW1 312 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 SH3BP4Q9P0V3 963 aa16.28■□□□□ 0.2
SHKBP1-205ENST00000594973 TEX51A0A1B0GUA7 166 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 CLIC1O00299 241 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 HS6ST1O60243 411 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 SCELO95171 688 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 ITGA2P17301 1181 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 TIA1P31483 386 aaKnown RBP eCLIP16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 GPLD1P80108 840 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 RPA4Q13156 261 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 SGCGQ13326 291 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 ADAM15Q13444 863 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 PON2Q15165 354 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 EID3Q8N140 333 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 FCGR1BQ92637 280 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 TMCO6Q96DC7 493 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 WDR34Q96EX3 536 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 TEX101Q9BY14 249 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 MIR1-1HGQ9H1L0 117 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 FZD3Q9NPG1 666 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 TAC3Q9UHF0 121 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 AP3M1Q9Y2T2 418 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 BOLA1Q9Y3E2 137 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 DENND4AQ7Z401 1863 aa16.27■□□□□ 0.2
SHKBP1-205ENST00000594973 SCAMP1O15126 338 aa16.27■□□□□ 0.19
SHKBP1-205ENST00000594973 EPN2O95208 641 aa16.27■□□□□ 0.19
SHKBP1-205ENST00000594973 PCSK2P16519 638 aa16.27■□□□□ 0.19
SHKBP1-205ENST00000594973 ASMTP46597 345 aa16.27■□□□□ 0.19
SHKBP1-205ENST00000594973 RPS5P46782 204 aaKnown RBP16.27■□□□□ 0.19
SHKBP1-205ENST00000594973 LAPTM5Q13571 262 aa16.27■□□□□ 0.19
SHKBP1-205ENST00000594973 MSANTD1Q6ZTZ1 278 aa16.27■□□□□ 0.19
SHKBP1-205ENST00000594973 ADHFE1Q8IWW8 467 aa16.27■□□□□ 0.19
SHKBP1-205ENST00000594973 LAS2Q8IYD9 372 aa16.27■□□□□ 0.19
SHKBP1-205ENST00000594973 OR5K2Q8NHB8 316 aa16.27■□□□□ 0.19
SHKBP1-205ENST00000594973 ITPAQ9BY32 194 aa16.27■□□□□ 0.19
SHKBP1-205ENST00000594973 PLSCR3Q9NRY6 295 aa16.27■□□□□ 0.19
SHKBP1-205ENST00000594973 FAM120CQ9NX05 1096 aaKnown RBP16.27■□□□□ 0.19
SHKBP1-205ENST00000594973 PCM1Q15154 2024 aa16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 BRWD1Q9NSI6 2320 aa16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 A0A1W2PQU0 124 aa16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 AIREO43918 545 aa16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 SLC35G4P0C7Q5 338 aa16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 HOXB6P17509 224 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 ABHD18Q0P651 414 aa16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 RAPSNQ13702 412 aa16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 TBRG1Q3YBR2 411 aa16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 TMEM196Q5HYL7 178 aa16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 ZNF517Q6ZMY9 492 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 RAB43Q86YS6 212 aa16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 WDR48Q8TAF3 677 aa16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 IPCEF1Q8WWN9 437 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 METTL2AQ96IZ6 378 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 DPH2Q9BQC3 489 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 CDADC1Q9BWV3 514 aa16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 DCAF13Q9NV06 445 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 CLDND1Q9NY35 253 aa16.26■□□□□ 0.19
SHKBP1-205ENST00000594973 FOXE1O00358 373 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 GNGT2O14610 69 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 MTRF1O75570 445 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 CTRB1P17538 263 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 PSMB5P28074 263 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 HTR2BP41595 481 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TNFRSF4P43489 277 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 RPS21P63220 83 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 KEAP1Q14145 624 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 CTRB2Q6GPI1 263 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 SPESP1Q6UW49 350 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TMIGD1Q6UXZ0 262 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 OXR1Q8N573 874 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TP53I13Q8NBR0 393 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 KBTBD8Q8NFY9 601 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 MAP6Q96JE9 813 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 PHOX2BQ99453 314 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TTYH2Q9BSA4 534 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 ZBTB20Q9HC78 741 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 RABL2AQ9UBK7 228 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TMEFF2Q9UIK5 374 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 KCNK6Q9Y257 313 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TRAPPC4Q9Y296 219 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TBC1D3DA0A087WVF3 549 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TBC1D3IA0A087WXS9 549 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TBC1D3EA0A087X179 549 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TBC1D3KA0A087X1G2 549 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TBC1D3FA6NER0 549 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TBC1D3LB9A6J9 549 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 UGT2B17O75795 530 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 FADS2O95864 444 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 DNTTP04053 509 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TBC1D3HP0C7X1 549 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 IL7P13232 177 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 IDSP22304 550 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TRIM23P36406 574 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 TGFBR1P36897 503 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 SLC15A1P46059 708 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 UGT2B15P54855 530 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 CYP4F2P78329 520 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 MC1RQ01726 317 aa16.25■□□□□ 0.19
SHKBP1-205ENST00000594973 PPP1R8Q12972 351 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms