RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 M1APQ8TC57 530 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 C16orf78Q8WTQ4 265 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 PTPMT1Q8WUK0 201 aaPredicted RBP11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 PSMF1Q92530 271 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 ZNF75CPQ92670 426 aaPredicted RBP11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 THOC3Q96J01 351 aaKnown RBP11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 CCT7Q99832 543 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 SLC25A23Q9BV35 468 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 NUDT9Q9BW91 350 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 EBPLQ9BY08 206 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 SEMA4CQ9C0C4 833 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 LHPPQ9H008 270 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 ACBD3Q9H3P7 528 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 ZNF552Q9H707 407 aaPredicted RBP11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 WDR41Q9HAD4 459 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 LRTM1Q9HBL6 345 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 PNPOQ9NVS9 261 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 C1orf109Q9NX04 203 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 CES1P1Q9UKY3 287 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 DLGAP4Q9Y2H0 992 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 PCDHGA9Q9Y5G4 932 aaKnown RBP11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 PCDHA9Q9Y5H5 950 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 DOCK10Q96BY6 2186 aa11.18□□□□□ -0.62
RABGGTA-218ENST00000560777 ATP6AP2A0A1C7CYW4 349 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 GNG14A0A1W2PPG7 69 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 C1orf226A1L170 272 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 KLF11O14901 512 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 SKAP2O75563 359 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 ATP6AP2O75787 350 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 MYO1DO94832 1006 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 PDGFAP04085 211 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 IFNA16P05015 189 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 JUNP05412 331 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 ITGAMP11215 1152 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 SFTPCP11686 197 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 GPR143P51810 404 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 SLC26A5P58743 744 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 OCRLQ01968 901 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 BIKQ13323 160 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 NR6A1Q15406 480 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 EXT1Q16394 746 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 BTBD16Q32M84 506 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 SOWAHCQ53LP3 525 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 OR52E8Q6IFG1 317 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 TCTN3Q6NUS6 607 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 SLC48A1Q6P1K1 146 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 C7orf57Q8NEG2 295 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 PPWD1Q96BP3 646 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 FCRL1Q96LA6 429 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 SMAD5Q99717 465 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 MMP25Q9NPA2 562 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 ADAP2Q9NPF8 381 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 ZNF71Q9NQZ8 489 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 GPR83Q9NYM4 423 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 HEY2Q9UBP5 337 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 GIMAP2Q9UG22 337 aa11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 POLR3HQ9Y535 204 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-218ENST00000560777 A0A1W2PS29 197 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 SYNDIG1LA6NDD5 238 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 SAGE2PA6NJ88 616 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 ATP8B1O43520 1251 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 PEX11AO75192 247 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 IL3P08700 152 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 DRD2P14416 443 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 TNNI3P19429 210 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 NR1D1P20393 614 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 TACR1P25103 407 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 GSTM5P46439 218 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 STT3AP46977 705 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 XKP51811 444 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 TERF2Q15554 542 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 ELAVL1Q15717 326 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 PDCD2Q16342 344 aaPredicted RBP11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 ZNF750Q32MQ0 723 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 GALNTL6Q49A17 601 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 C6orf136Q5SQH8 315 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 DGAT2L6Q6ZPD8 337 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 OR4K14Q8NGD5 310 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 C9orf43Q8TAL5 461 aaPredicted RBP11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 BRIX1Q8TDN6 353 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 ELP5Q8TE02 316 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 SLC39A7Q92504 469 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 C19orf60Q96EN9 201 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 RBM18Q96H35 190 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 EGLN2Q96KS0 407 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 PPP3R2Q96LZ3 170 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 FAIM2Q9BWQ8 316 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 SLC25A18Q9H1K4 315 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 ZBTB20Q9HC78 741 aaPredicted RBP11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 INTS9Q9NV88 658 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 C5AR2Q9P296 337 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 PPIEQ9UNP9 301 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 EXO1Q9UQ84 846 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 TP53TG5Q9Y2B4 290 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 CLCA3PQ9Y6N3 262 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 ATRXP46100 2492 aa11.16□□□□□ -0.62
RABGGTA-218ENST00000560777 BOD1L1Q8NFC6 3051 aa11.15□□□□□ -0.62
RABGGTA-218ENST00000560777 C17orf105B2RV13 164 aa11.15□□□□□ -0.62
RABGGTA-218ENST00000560777 DDAH2O95865 285 aa11.15□□□□□ -0.62
RABGGTA-218ENST00000560777 SLC35E2P0CK97 266 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms