RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 OBP2AQ9NY56 170 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 RDH8Q9NYR8 311 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 GRHPRQ9UBQ7 328 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 EI24O14681 340 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 ITM2AO43736 263 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 CDK14O94921 469 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 SCAF4O95104 1147 aaKnown RBP7.5□□□□□ -1.21
VPS13D-211ENST00000543710 MSR1P21757 451 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 OR3A3P47888 321 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 OR3A2P47893 321 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 GDF10P55107 478 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 SLC10A7Q0GE19 358 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 PCBP2Q15366 365 aaKnown RBP eCLIP7.5□□□□□ -1.21
VPS13D-211ENST00000543710 TLR1Q15399 786 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 SOWAHAQ2M3V2 549 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 CRB2Q5IJ48 1285 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 ANKRD33Q7Z3H0 272 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 ANKRD13BQ86YJ7 626 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 CBARPQ8N350 705 aaPredicted RBP7.5□□□□□ -1.21
VPS13D-211ENST00000543710 PROKR2Q8NFJ6 384 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 ZNF675Q8TD23 568 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 ECHDC3Q96DC8 303 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 LOXL4Q96JB6 756 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 TSSK3Q96PN8 268 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 FEM1AQ9BSK4 669 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 ACAD8Q9UKU7 415 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 SULT1C2O00338 296 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 CASC3O15234 703 aaKnown RBP7.5□□□□□ -1.21
VPS13D-211ENST00000543710 NDUFS4O43181 175 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 RFPL3O75679 317 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 S100PP25815 95 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 SLC6A8P48029 635 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 PGDP52209 483 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 S100A12P80511 92 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 CDKL1Q00532 357 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 GPR17Q13304 367 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 HMGN3Q15651 99 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 TSTQ16762 297 aaKnown RBP7.5□□□□□ -1.21
VPS13D-211ENST00000543710 KIAA0895LQ68EN5 471 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 SPERTQ8NA61 448 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 OR5T3Q8NGG3 340 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 ASB13Q8WXK3 278 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 SIAEQ9HAT2 523 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 TVP23BQ9NYZ1 205 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 ANKMY1Q9P2S6 941 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 NWD2Q9ULI1 1742 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 CHD4Q14839 1912 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 TMEM150BA6NC51 233 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 B8ZZF3 427 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 MEN1O00255 615 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 PSMA6P60900 246 aaKnown RBP7.5□□□□□ -1.21
VPS13D-211ENST00000543710 MAXP61244 160 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 CXADRP78310 365 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 CRYZQ08257 329 aaKnown RBP7.5□□□□□ -1.21
VPS13D-211ENST00000543710 SLBPQ14493 270 aaKnown RBP eCLIP7.5□□□□□ -1.21
VPS13D-211ENST00000543710 MFSD13AQ14CX5 517 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 FHL5Q5TD97 284 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 C1orf189Q5VU69 101 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 HFE2Q6ZVN8 426 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 CCDC28AQ8IWP9 274 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 MS4A15Q8N5U1 240 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 MFSD2AQ8NA29 543 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 DENND6BQ8NEG7 585 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 OR2L3Q8NG85 312 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 OR2AP1Q8NGE2 309 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 TFAP2BQ92481 460 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 TCEAL7Q9BRU2 100 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 HERPUD2Q9BSE4 406 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 ZNF471Q9BX82 626 aaPredicted RBP7.5□□□□□ -1.21
VPS13D-211ENST00000543710 HES7Q9BYE0 225 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 ANKRD60Q9BZ19 345 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 DPEP3Q9H4B8 488 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 BRD7Q9NPI1 651 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 FAM86C1Q9NVL1 165 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 CNOT2Q9NZN8 540 aaKnown RBP7.5□□□□□ -1.21
VPS13D-211ENST00000543710 EPHA6Q9UF33 1036 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 SPEF1Q9Y4P9 236 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 C2orf74A8MZ97 194 aa7.49□□□□□ -1.21
VPS13D-211ENST00000543710 HSPA12AO43301 675 aa7.49□□□□□ -1.21
VPS13D-211ENST00000543710 PEX10O60683 326 aa7.49□□□□□ -1.21
VPS13D-211ENST00000543710 JRKO75564 520 aa7.49□□□□□ -1.21
VPS13D-211ENST00000543710 PGLSO95336 258 aa7.49□□□□□ -1.21
VPS13D-211ENST00000543710 DBIP07108 87 aaKnown RBP7.49□□□□□ -1.21
VPS13D-211ENST00000543710 ITGB8P26012 769 aa7.49□□□□□ -1.21
VPS13D-211ENST00000543710 SRP14P37108 136 aaKnown RBP7.49□□□□□ -1.21
VPS13D-211ENST00000543710 MPLP40238 635 aa7.49□□□□□ -1.21
VPS13D-211ENST00000543710 YAP1P46937 504 aaKnown RBP7.49□□□□□ -1.21
VPS13D-211ENST00000543710 ZNF41P51814 821 aaPredicted RBP7.49□□□□□ -1.21
VPS13D-211ENST00000543710 WDR4P57081 412 aaKnown RBP7.49□□□□□ -1.21
VPS13D-211ENST00000543710 TMPRSS3P57727 454 aa7.49□□□□□ -1.21
VPS13D-211ENST00000543710 IRF9Q00978 393 aa7.49□□□□□ -1.21
VPS13D-211ENST00000543710 ANKRD26P1Q6NSI1 321 aa7.49□□□□□ -1.21
VPS13D-211ENST00000543710 KCTD18Q6PI47 426 aaPredicted RBP7.49□□□□□ -1.21
VPS13D-211ENST00000543710 PGAP1Q75T13 922 aa7.49□□□□□ -1.21
VPS13D-211ENST00000543710 GPR149Q86SP6 731 aa7.49□□□□□ -1.21
VPS13D-211ENST00000543710 YIPF7Q8N8F6 280 aa7.49□□□□□ -1.21
VPS13D-211ENST00000543710 DRAXINQ8NBI3 349 aaPredicted RBP7.49□□□□□ -1.21
VPS13D-211ENST00000543710 OR4K17Q8NGC6 315 aa7.49□□□□□ -1.21
VPS13D-211ENST00000543710 CHPT1Q8WUD6 406 aa7.49□□□□□ -1.21
VPS13D-211ENST00000543710 TANKQ92844 425 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms