RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 PHF21BQ96EK2 531 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 VMP1Q96GC9 406 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 SEC16BQ96JE7 1060 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 LURAP1Q96LR2 239 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 SH3GL2Q99962 352 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 VKORC1Q9BQB6 163 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 CAPS2Q9BXY5 557 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 PITHD1Q9GZP4 211 aaPredicted RBP13.03□□□□□ -0.32
CCND1-204ENST00000539241 ACBD3Q9H3P7 528 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 GPRC5BQ9NZH0 403 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 ZNF223Q9UK11 482 aaPredicted RBP13.03□□□□□ -0.32
CCND1-204ENST00000539241 PPIEQ9UNP9 301 aaKnown RBP13.03□□□□□ -0.32
CCND1-204ENST00000539241 CLDN16Q9Y5I7 305 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 DCHS2Q6V1P9 2916 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 ANKDD1BA6NHY2 528 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 TGFBR3LH3BV60 316 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 ADAM10O14672 748 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 PEX1O43933 1283 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 DLX3O60479 287 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 CCNT2O60583 730 aaKnown RBP13.02□□□□□ -0.33
CCND1-204ENST00000539241 CLEC3AO75596 197 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 SASH3O75995 380 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 MYL2P10916 166 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 HPDP32754 393 aaPredicted RBP13.02□□□□□ -0.33
CCND1-204ENST00000539241 KIR3DL1P43629 444 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 PLA2G16P53816 162 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 HSD17B7P56937 341 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 SLC13A2Q13183 592 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 ZNF595Q8IYB9 648 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 ZNF295-AS1Q8N0V1 137 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 GOLGA6L1Q8N7Z2 621 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 SNX31Q8N9S9 440 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 CCDC63Q8NA47 563 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 TMEM52Q8NDY8 209 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 QRFPRQ96P65 431 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 FAM111AQ96PZ2 611 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 DMRTA2Q96SC8 542 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 C1QTNF3Q9BXJ4 246 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 REXO4Q9GZR2 422 aaKnown RBP13.02□□□□□ -0.33
CCND1-204ENST00000539241 NT5DC2Q9H857 520 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 ADAP2Q9NPF8 381 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 ZNF446Q9NWS9 450 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 PPT2Q9UMR5 302 aa13.02□□□□□ -0.33
CCND1-204ENST00000539241 MRPS33Q9Y291 106 aaKnown RBP13.02□□□□□ -0.33
CCND1-204ENST00000539241 A0A1B0GTH9 108 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 G3V2L1 256 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 CLGNO14967 610 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 TM9SF1O15321 606 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 HS6ST1O60243 411 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 PRKNO60260 465 aaPredicted RBP13.01□□□□□ -0.33
CCND1-204ENST00000539241 CDC40O60508 579 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCND1-204ENST00000539241 ZFAND5O76080 213 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 SIX3O95343 332 aaPredicted RBP13.01□□□□□ -0.33
CCND1-204ENST00000539241 TBX6O95947 436 aaPredicted RBP13.01□□□□□ -0.33
CCND1-204ENST00000539241 TPOP07202 933 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 RPS17P08708 135 aaKnown RBP13.01□□□□□ -0.33
CCND1-204ENST00000539241 CPA3P15088 417 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 EPB42P16452 691 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 CERS1P27544 350 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 PTGS2P35354 604 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 SSR4P51571 173 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 GPR143P51810 404 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 PRKAA2P54646 552 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 GPR85P60893 370 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 MAGOHP61326 146 aaKnown RBP13.01□□□□□ -0.33
CCND1-204ENST00000539241 HERVK_113P63132 956 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 ADPRMQ3LIE5 342 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 TRIM40Q6P9F5 258 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 ABHD17CQ6PCB6 329 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 MDGA2Q7Z553 956 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 VN1R5Q7Z5H4 357 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 CLNKQ7Z7G1 428 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 CD163Q86VB7 1156 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 ZFP62Q8NB50 900 aaPredicted RBP13.01□□□□□ -0.33
CCND1-204ENST00000539241 OR2L5Q8NG80 312 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 C16orf52Q8NHV5 167 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 FAM57AQ8TBR7 257 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 ARL8AQ96BM9 186 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 SDCCAG3Q96C92 435 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 ATP6V1G3Q96LB4 118 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 SERINC2Q96SA4 455 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 CSF3RQ99062 836 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 ERVK-6Q9BXR3 956 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 C12orf65Q9H3J6 166 aaKnown RBP13.01□□□□□ -0.33
CCND1-204ENST00000539241 EHD1Q9H4M9 534 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 COPS7BQ9H9Q2 264 aaPredicted RBP13.01□□□□□ -0.33
CCND1-204ENST00000539241 TIMMDC1Q9NPL8 285 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 SLC17A7Q9P2U7 560 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 YARS2Q9Y2Z4 477 aaKnown RBP13.01□□□□□ -0.33
CCND1-204ENST00000539241 ANGPTL3Q9Y5C1 460 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 NCOA6Q14686 2063 aaPredicted RBP13.01□□□□□ -0.33
CCND1-204ENST00000539241 PDZD2O15018 2839 aa13.01□□□□□ -0.33
CCND1-204ENST00000539241 SYNDIG1LA6NDD5 238 aa13□□□□□ -0.33
CCND1-204ENST00000539241 LRRC14BA6NHZ5 514 aa13□□□□□ -0.33
CCND1-204ENST00000539241 A8MVJ9 347 aa13□□□□□ -0.33
CCND1-204ENST00000539241 CYR61O00622 381 aa13□□□□□ -0.33
CCND1-204ENST00000539241 PRAMEF4O60810 478 aa13□□□□□ -0.33
CCND1-204ENST00000539241 ZWINTO95229 277 aa13□□□□□ -0.33
CCND1-204ENST00000539241 IFNA16P05015 189 aa13□□□□□ -0.33
CCND1-204ENST00000539241 EPORP19235 508 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms