RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 RGS16O15492 202 aaPredicted RBP12.03□□□□□ -0.48
COL5A1-206ENST00000465877 ULK1O75385 1050 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 ERLIN1O75477 346 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 CRCPO75575 148 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 CREB1P16220 341 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 STT3AP46977 705 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 CLCN2P51788 898 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 MAPK12P53778 367 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 ASPHQ12797 758 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 CEP85LQ5SZL2 805 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 CCNYL2Q5T2Q4 361 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 OR4N5Q8IXE1 308 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 C1orf52Q8N6N3 182 aaKnown RBP12.03□□□□□ -0.48
COL5A1-206ENST00000465877 GBP7Q8N8V2 638 aaPredicted RBP12.03□□□□□ -0.48
COL5A1-206ENST00000465877 CATSPER1Q8NEC5 780 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 SLC2A12Q8TD20 617 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 TCP10LQ8TDR4 215 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 HAS2Q92819 552 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 TANKQ92844 425 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 DGAT2Q96PD7 388 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 MECRQ9BV79 373 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 DEFB126Q9BYW3 111 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.03□□□□□ -0.48
COL5A1-206ENST00000465877 NMRK1Q9NWW6 199 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 VPS29Q9UBQ0 182 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 NTNG1Q9Y2I2 539 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 TRAV17A0A0B4J275 112 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 GLOD5A6NK44 160 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 TYROBPO43914 113 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 TRIM13O60858 407 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 COX7A2P14406 83 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 CHN1P15882 459 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 ALOX15P16050 662 aaPredicted RBP12.02□□□□□ -0.49
COL5A1-206ENST00000465877 ALDH3A1P30838 453 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 GPR143P51810 404 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 HMGCS1Q01581 520 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 TUBA3CQ13748 450 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 INAQ16352 499 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 SPIN4Q56A73 249 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 NDUFAF5Q5TEU4 345 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 TUBA3EQ6PEY2 450 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 ATCAYQ86WG3 371 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 RPS19BP1Q86WX3 136 aaKnown RBP12.02□□□□□ -0.49
COL5A1-206ENST00000465877 ST13P4Q8IZP2 240 aaPredicted RBP12.02□□□□□ -0.49
COL5A1-206ENST00000465877 MORN4Q8NDC4 146 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 C7orf57Q8NEG2 295 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 OR1N1Q8NGS0 311 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 THAP3Q8WTV1 239 aaPredicted RBP12.02□□□□□ -0.49
COL5A1-206ENST00000465877 PTPMT1Q8WUK0 201 aaPredicted RBP12.02□□□□□ -0.49
COL5A1-206ENST00000465877 SNRNP40Q96DI7 357 aaKnown RBP12.02□□□□□ -0.49
COL5A1-206ENST00000465877 PELOQ9BRX2 385 aaKnown RBP12.02□□□□□ -0.49
COL5A1-206ENST00000465877 TRMOQ9BU70 441 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 GATA5Q9BWX5 397 aaPredicted RBP12.02□□□□□ -0.49
COL5A1-206ENST00000465877 SHCBP1LQ9BZQ2 653 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 OR8D2Q9GZM6 311 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 CDCP1Q9H5V8 836 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 TNFRSF12AQ9NP84 129 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 ASF1BQ9NVP2 202 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 ANKRD10Q9NXR5 420 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 STMN3Q9NZ72 180 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 COPS7AQ9UBW8 275 aa12.02□□□□□ -0.49
COL5A1-206ENST00000465877 COL12A1Q99715 3063 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 C1orf226A1L170 272 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 FCHO1O14526 889 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 PCDH7O60245 1069 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 PRKNO60260 465 aaPredicted RBP12.01□□□□□ -0.49
COL5A1-206ENST00000465877 OR10H2O60403 315 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 DDAH2O95865 285 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 TNNI3P19429 210 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 TIA1P31483 386 aaKnown RBP eCLIP12.01□□□□□ -0.49
COL5A1-206ENST00000465877 ST13P50502 369 aaKnown RBP12.01□□□□□ -0.49
COL5A1-206ENST00000465877 MLF1P58340 268 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 ACSM2AQ08AH3 577 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 BIKQ13323 160 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 IMPG1Q17R60 797 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 SPRED3Q2MJR0 410 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 ACSM2BQ68CK6 577 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 CLEC6AQ6EIG7 209 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 SCIMPQ6UWF3 145 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 DGAT2L6Q6ZPD8 337 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 ZCCHC23Q6ZST2 131 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 CROCCP2Q86T23 111 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 MMP21Q8N119 569 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 ARMC10Q8N2F6 343 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 CISD2Q8N5K1 135 aaKnown RBP12.01□□□□□ -0.49
COL5A1-206ENST00000465877 ZNF321PQ8N8H1 164 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 SUN3Q8TAQ9 357 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 UCN3Q969E3 161 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 C19orf60Q96EN9 201 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 ART5Q96L15 291 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 SIGLEC12Q96PQ1 595 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 UTP23Q9BRU9 249 aaKnown RBP12.01□□□□□ -0.49
COL5A1-206ENST00000465877 CENPHQ9H3R5 247 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 MCM8Q9UJA3 840 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 RP1L1Q8IWN7 2480 aaPredicted RBP12.01□□□□□ -0.49
COL5A1-206ENST00000465877 EML6Q6ZMW3 1958 aa12.01□□□□□ -0.49
COL5A1-206ENST00000465877 A0A1W2PS29 197 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 SERTM1A2A2V5 107 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 DYRK3O43781 588 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 NPHS1O60500 1241 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms