RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, human

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-208	ENST00000431611	LDAH	Q9H6V9	325 aa		13.99	□□□□□ -0.17
CSNK1E-208	ENST00000431611	SLC24A3	Q9HC58	644 aa		13.99	□□□□□ -0.17
CSNK1E-208	ENST00000431611	TUBA8	Q9NY65	449 aa	Predicted RBP	13.99	□□□□□ -0.17
CSNK1E-208	ENST00000431611	ATG4B	Q9Y4P1	393 aa		13.99	□□□□□ -0.17
CSNK1E-208	ENST00000431611	AKAP9	Q99996	3911 aa		13.99	□□□□□ -0.17
CSNK1E-208	ENST00000431611	FAM159B	A6NKW6	160 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	EIF3H	O15372	352 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	FGF17	O60258	216 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	KLK8	O60259	260 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	SUSD5	O60279	629 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	WDR1	O75083	606 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	CELA3A	P09093	270 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	SERPINB1	P30740	379 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	SPR	P35270	261 aa	Predicted RBP	13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	GMPR	P36959	345 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	PIGA	P37287	484 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	ZFP36L2	P47974	494 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	IGLV3-21	P80748	117 aa	Predicted RBP	13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	MYBPH	Q13203	477 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	SLAMF1	Q13291	335 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	WLS	Q5T9L3	541 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	DEPDC1	Q5TB30	811 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	SLC22A10	Q63ZE4	541 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	RTL6	Q6ICC9	239 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	OR4C11	Q6IEV9	310 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	C3orf62	Q6ZUJ4	267 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	RAPH1	Q70E73	1250 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	TMEM200A	Q86VY9	491 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	CTAGE3P	Q8IX95	158 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	OR7G3	Q8NG95	312 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	NUBPL	Q8TB37	319 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	SLC22A8	Q8TCC7	542 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	PPWD1	Q96BP3	646 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	SARAF	Q96BY9	339 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	CMTM7	Q96FZ5	175 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	RBM18	Q96H35	190 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	SORBS1	Q9BX66	1292 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	DPH5	Q9H2P9	285 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	OR51B5	Q9H339	312 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	EXO5	Q9H790	373 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	RPF2	Q9H7B2	306 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	SEMA4B	Q9NPR2	832 aa	Predicted RBP	13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	MS4A12	Q9NXJ0	267 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	NUDT4	Q9NZJ9	180 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	OPTC	Q9UBM4	332 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	RNF14	Q9UBS8	474 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	FAM215A	Q9Y5M1	114 aa		13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-208	ENST00000431611	TRGV5	A0A0B4J1U4	118 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611		A0A0G2JNJ9	132 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	SUPT3H	B4E1H0	165 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611		K7EPI3	171 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	HCN1	O60741	890 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	SUPT3H	O75486	399 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	IGKV3-11	P04433	115 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	BIK	Q13323	160 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	DDX39B	Q13838	428 aa	Known RBP	13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	ZNF791	Q3KP31	576 aa	Predicted RBP	13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	C1orf185	Q5T7R7	199 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	GRTP1	Q5TC63	336 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	ISCA2	Q86U28	154 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	GPR180	Q86V85	440 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	C9orf40	Q8IXQ3	194 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	MYRIP	Q8NFW9	859 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	RGMA	Q96B86	450 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	ART5	Q96L15	291 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	CENPK	Q9BS16	269 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	ERP44	Q9BS26	406 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	NMRAL1	Q9HBL8	299 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	ALKBH4	Q9NXW9	302 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	WHRN	Q9P202	907 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611		Q9UFV3	132 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	ADGRE2	Q9UHX3	823 aa		13.97	□□□□□ -0.17
CSNK1E-208	ENST00000431611	HIVEP1	P15822	2718 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	FAM187A	A6NFU0	413 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	FAM47E-STBD1	D6RA91	191 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	UBXN8	O00124	270 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	HRK	O00198	91 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	ZWINT	O95229	277 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	C1QA	P02745	245 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	GSTA2	P09210	222 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	CD1E	P15812	388 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	EPB42	P16452	691 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	TLX1	P31314	330 aa	Predicted RBP	13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	RAP1GDS1	P52306	607 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	ART1	P52961	327 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	KCNJ2	P63252	427 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	PLIN5	Q00G26	463 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	FOLH1	Q04609	750 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	PCDH1	Q08174	1060 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	TBL3	Q12788	808 aa	Known RBP	13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	GRHL2	Q6ISB3	625 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	DGAT2L6	Q6ZPD8	337 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	CMC1	Q7Z7K0	106 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	TBC1D1	Q86TI0	1168 aa	Predicted RBP	13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	LIX1L	Q8IVB5	337 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	RNF175	Q8N4F7	328 aa		13.96	□□□□□ -0.17
CSNK1E-208	ENST00000431611	SLC15A4	Q8N697	577 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms