RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 NRG3P56975 720 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 ADGRF1Q5T601 910 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 EIF5AL1Q6IS14 154 aaKnown RBP11.56□□□□□ -0.56
UBR4-205ENST00000417040 BLOC1S3Q6QNY0 202 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 ZNF611Q8N823 705 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 TMIEQ8NEW7 156 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 MSRAQ9UJ68 235 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 HMX3A6NHT5 357 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 SNNO75324 88 aaPredicted RBP11.56□□□□□ -0.56
UBR4-205ENST00000417040 JAG1P78504 1218 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 ZNF791Q3KP31 576 aaPredicted RBP11.56□□□□□ -0.56
UBR4-205ENST00000417040 GPRC6AQ5T6X5 926 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 TAS1R3Q7RTX0 852 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 OR9Q2Q8NGE9 314 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 MYRFLQ96LU7 910 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 MAGED1Q9Y5V3 778 aaPredicted RBP11.56□□□□□ -0.56
UBR4-205ENST00000417040 MEIS3P1A6NDR6 274 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 BHMG1C9JSJ3 638 aaPredicted RBP11.56□□□□□ -0.56
UBR4-205ENST00000417040 BCKDHAP12694 445 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 GNRHRP30968 328 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 TAS2R43P59537 309 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 ZNF616Q08AN1 781 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 IRF5Q13568 498 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 SGCBQ16585 318 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 GTDC1Q4AE62 458 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 ZNF584Q8IVC4 421 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 CMTM8Q8IZV2 173 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 TTLQ8NG68 377 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 OR13C3Q8NGS6 347 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 BORCS6Q96GS4 357 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 POLDIP3Q9BY77 421 aaKnown RBP11.56□□□□□ -0.56
UBR4-205ENST00000417040 OR51E2Q9H255 320 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 SMOC2Q9H3U7 446 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 SRA1Q9HD15 236 aaKnown RBP11.56□□□□□ -0.56
UBR4-205ENST00000417040 FZD3Q9NPG1 666 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 TRBV2A0A0J9YWF9 115 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 SMCO3A2RU48 225 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 ATE1O95260 518 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 PIGRP01833 764 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 HLA-EP13747 358 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 HOXC12P31275 282 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 SLC26A5P58743 744 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 BATFQ16520 125 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 TBC1D25Q3MII6 688 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 KIF18BQ86Y91 864 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 OR4K3Q96R72 315 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 ZNF382Q96SR6 550 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 POU2F3Q9UKI9 436 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 RABL2BQ9UNT1 228 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 ETFAP13804 333 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 SSTR2P30874 369 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 PIK3CBP42338 1070 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 PUS10Q3MIT2 529 aaKnown RBP11.55□□□□□ -0.56
UBR4-205ENST00000417040 CHRFAM7AQ494W8 412 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 C10orf62Q5T681 223 aaPredicted RBP11.55□□□□□ -0.56
UBR4-205ENST00000417040 PSAPL1Q6NUJ1 521 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 SLC27A4Q6P1M0 643 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 GPRIN1Q7Z2K8 1008 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 SYNPO2LQ9H987 977 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 TMEM248Q9NWD8 314 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 SNED1Q8TER0 1413 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 BCAS1O75363 584 aaPredicted RBP11.55□□□□□ -0.56
UBR4-205ENST00000417040 GATMP50440 423 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 GABARAPL2P60520 117 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 FADDQ13158 208 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 SNTB2Q13425 540 aaKnown RBP11.55□□□□□ -0.56
UBR4-205ENST00000417040 SPATS1Q496A3 300 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 ZFAND4Q86XD8 727 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 OR56A1Q8NGH5 318 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 FKBP10Q96AY3 582 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 FEVQ99581 238 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 KLRF1Q9NZS2 232 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 CXXC1Q9P0U4 656 aaPredicted RBP11.55□□□□□ -0.56
UBR4-205ENST00000417040 WDR45Q9Y484 360 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 OARD1Q9Y530 152 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 A0A1B0GVI7 797 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 HTR3EA5X5Y0 456 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 SOX1O00570 391 aaPredicted RBP11.55□□□□□ -0.56
UBR4-205ENST00000417040 CDK4P11802 303 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 MLLT6P55198 1093 aaPredicted RBP11.55□□□□□ -0.56
UBR4-205ENST00000417040 GPAT4Q86UL3 456 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 THAP4Q8WY91 577 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 TFGQ92734 400 aaPredicted RBP11.55□□□□□ -0.56
UBR4-205ENST00000417040 TEX13CA0A0J9YWL9 993 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 TMEM150CB9EJG8 249 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 PRMT3O60678 531 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 SOX30O94993 753 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 S1PR4O95977 384 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 PYCR1P32322 319 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 HNF1BP35680 557 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 ARL3P36405 182 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 AQP2P41181 271 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 PTH2RP49190 550 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 HERV-K104P61576 105 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 APOFQ13790 326 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 RGMBQ6NW40 437 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 LRRTM4Q86VH4 590 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 LINC00471Q8N535 108 aa11.55□□□□□ -0.56
UBR4-205ENST00000417040 MINDY1Q8N5J2 469 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms