RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 PCDHB10Q9UN67 800 aa14.25□□□□□ -0.13
LRRK1-201ENST00000388948 MYH9P35579 1960 aaKnown RBP14.24□□□□□ -0.13
LRRK1-201ENST00000388948 RFXAPO00287 272 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 SCGB2A1O75556 95 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 PDYNP01213 254 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 HOXA11P31270 313 aaPredicted RBP14.24□□□□□ -0.13
LRRK1-201ENST00000388948 EMX2Q04743 252 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 PPP1R8Q12972 351 aaKnown RBP14.24□□□□□ -0.13
LRRK1-201ENST00000388948 LIN52Q52LA3 116 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 CYBRD1Q53TN4 286 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 OGFOD2Q6N063 350 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 KCTD18Q6PI47 426 aaPredicted RBP14.24□□□□□ -0.13
LRRK1-201ENST00000388948 ZFYVE21Q9BQ24 234 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 FARSAQ9Y285 508 aaKnown RBP14.24□□□□□ -0.13
LRRK1-201ENST00000388948 J3QRK9 145 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 SRCP12931 536 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 GRIN2CQ14957 1233 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 GNPDA2Q8TDQ7 276 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 EDAQ92838 391 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 OR10A4Q9H209 315 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 OR51I1Q9H343 314 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 MTG2Q9H4K7 406 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 GRHL1Q9NZI5 618 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 H6PDO95479 791 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 MLLT10P55197 1068 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 PITX1P78337 314 aaPredicted RBP14.24□□□□□ -0.13
LRRK1-201ENST00000388948 SIM1P81133 766 aaPredicted RBP14.24□□□□□ -0.13
LRRK1-201ENST00000388948 TDGQ13569 410 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 PLGLAQ15195 96 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 SHKBP1Q8TBC3 707 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 SLC2A13Q96QE2 648 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 LOC102723532A0A0G2JNH3 316 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 ARL6IP5O75915 188 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 ACTL6BO94805 426 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 DCP2Q8IU60 420 aaKnown RBP14.24□□□□□ -0.13
LRRK1-201ENST00000388948 KLHDC8AQ8IYD2 350 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 SNIP1Q8TAD8 396 aaKnown RBP14.24□□□□□ -0.13
LRRK1-201ENST00000388948 FCGR1BQ92637 280 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 LRCH3Q96II8 777 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 ARL5BQ96KC2 179 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 MRPL3P09001 348 aaKnown RBP14.24□□□□□ -0.13
LRRK1-201ENST00000388948 MAPK3P27361 379 aaPredicted RBP14.24□□□□□ -0.13
LRRK1-201ENST00000388948 OR1E2P47887 323 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 RAB11FIP2Q7L804 512 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 BBS10Q8TAM1 723 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 MROQ9BYG7 248 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 COQ10BQ9H8M1 238 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 DNAJC27Q9NZQ0 273 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 ISPDA4D126 451 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 CD63P08962 238 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 ETS2P15036 469 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 NUDT1P36639 197 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 PQLC3Q8N755 202 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 MRGPRX2Q96LB1 330 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 PCDH10Q9P2E7 1040 aa14.24□□□□□ -0.13
LRRK1-201ENST00000388948 PROM1O43490 865 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 CREG1O75629 220 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 VAMP1P23763 118 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 LRFN4Q6PJG9 635 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 TOX2Q96NM4 488 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 ULBP3Q9BZM4 244 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 TRPV4Q9HBA0 871 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 LRIT1Q9P2V4 623 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 PTGESO14684 152 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 SLC36A3Q495N2 470 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.23□□□□□ -0.13
LRRK1-201ENST00000388948 OR51A7Q8NH64 312 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 ABCD2Q9UBJ2 740 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 SPEF1Q9Y4P9 236 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 NUMBLQ9Y6R0 609 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 ARPC2O15144 300 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 PPM1BO75688 479 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 PABPC4LP0CB38 370 aaKnown RBP14.23□□□□□ -0.13
LRRK1-201ENST00000388948 PEPDP12955 493 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 TIA1P31483 386 aaKnown RBP eCLIP14.23□□□□□ -0.13
LRRK1-201ENST00000388948 ALG10BQ5I7T1 473 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 ACVR1CQ8NER5 493 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 VRTNQ9H8Y1 702 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 DLG5Q8TDM6 1919 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 RTCAO00442 366 aaKnown RBP14.23□□□□□ -0.13
LRRK1-201ENST00000388948 EI24O14681 340 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 GJA5P36382 358 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 AP2S1P53680 142 aaPredicted RBP14.23□□□□□ -0.13
LRRK1-201ENST00000388948 SLC18A2Q05940 514 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 C10orf82Q8WW14 230 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 XYLT2Q9H1B5 865 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 GPN2Q9H9Y4 310 aaPredicted RBP14.23□□□□□ -0.13
LRRK1-201ENST00000388948 FAM208AQ9UK61 1670 aaKnown RBP14.23□□□□□ -0.13
LRRK1-201ENST00000388948 SOCS2O14508 198 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 ENTPD6O75354 484 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 CD79AP11912 226 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 BPIP17213 487 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 HSD11B2P80365 405 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 ABHD18Q0P651 414 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 SLC44A3Q8N4M1 653 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 SPERTQ8NA61 448 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 TCEAL4Q96EI5 215 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 TMEM74Q96NL1 305 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 POPDC3Q9HBV1 291 aa14.23□□□□□ -0.13
LRRK1-201ENST00000388948 PFDN2Q9UHV9 154 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms