RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 EHD3Q9NZN3 535 aa13.27□□□□□ -0.28
HERPUD1-203ENST00000379792 IFT80Q9P2H3 777 aaPredicted RBP13.27□□□□□ -0.28
HERPUD1-203ENST00000379792 MAPRE3Q9UPY8 281 aa13.27□□□□□ -0.28
HERPUD1-203ENST00000379792 SCN2AQ99250 2005 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 CEP295Q9C0D2 2601 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 MRASO14807 208 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 FGF17O60258 216 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 SCN2BO60939 215 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 BMP10O95393 424 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 CPSF4O95639 269 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 FOLH1Q04609 750 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 SLC13A2Q13183 592 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 STX5Q13190 355 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 MAPKAPK3Q16644 382 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 DPY19L1Q2PZI1 675 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 OR52E8Q6IFG1 317 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 RINLQ6ZS11 566 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 CAMKMTQ7Z624 323 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 LAPTM4BQ86VI4 370 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 GALNT15Q8N3T1 639 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 OR4K14Q8NGD5 310 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 CNRIP1Q96F85 164 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 BHLHE41Q9C0J9 482 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 CHST8Q9H2A9 424 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 POLR1BQ9H9Y6 1135 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 LANCL2Q9NS86 450 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 ATAD3AQ9NVI7 634 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 SLAMF8Q9P0V8 285 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 MAP10Q9P2G4 905 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 ERVK-11Q9UQG0 969 aa13.27□□□□□ -0.29
HERPUD1-203ENST00000379792 B2RBV5 119 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 TGFBR3LH3BV60 316 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 PDPK1O15530 556 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 TBX19O60806 448 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 C6orf47O95873 294 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 GSNP06396 782 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 KLK3P07288 261 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 ABCB1P08183 1280 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 MAOAP21397 527 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 CALB2P22676 271 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 XKP51811 444 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 MINDY4Q4G0A6 757 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 C6orf10Q5SRN2 563 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 TMEM164Q5U3C3 297 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 FAM69BQ5VUD6 431 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 DNAJC14Q6Y2X3 702 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 ZNF551Q7Z340 670 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 TIPARPQ7Z3E1 657 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 CCDC116Q8IYX3 515 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 DOK4Q8TEW6 326 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 TSPEARQ8WU66 669 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 GTF2H4Q92759 462 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 TANKQ92844 425 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 ANKRD9Q96BM1 317 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 BBS4Q96RK4 519 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 ZPBPQ9BS86 351 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 MKKSQ9NPJ1 570 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 SERHLQ9NQF3 203 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 PRTFDC1Q9NRG1 225 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 TAS2R7Q9NYW3 318 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 LEF1Q9UJU2 399 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 PSME2Q9UL46 239 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 MSRB2Q9Y3D2 182 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 PCDHGA3Q9Y5H0 932 aa13.26□□□□□ -0.29
HERPUD1-203ENST00000379792 FER1L5A0AVI2 2057 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 PRSS51A0A1B0GVH4 220 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 A0A1W2PRB8 838 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 CLDN4O14493 209 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 CNOT3O75175 753 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 GPR75O95800 540 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 AGXTP21549 392 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 CDKN2CP42773 168 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 NUDT2P50583 147 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 EFNA3P52797 238 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 MXRA7P84157 204 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 ANXA8L1Q5VT79 327 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 C6orf15Q6UXA7 325 aaPredicted RBP13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 OVCH1Q7RTY7 1134 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 ZNF595Q8IYB9 648 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 STT3BQ8TCJ2 826 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 ZNF681Q96N22 645 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 SLC39A3Q9BRY0 314 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 TUBB6Q9BUF5 446 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 SPRY4Q9C004 299 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 SOX17Q9H6I2 414 aaPredicted RBP13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 EFCAB1Q9HAE3 211 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 SLC6A13Q9NSD5 602 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 FAM120CQ9NX05 1096 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 ZNF282Q9UDV7 671 aaPredicted RBP13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 MRPS33Q9Y291 106 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 ZNF780BQ9Y6R6 833 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 ACACBO00763 2458 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 DYTNA2CJ06 578 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 CTNSO60931 367 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 SLC5A2P31639 672 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 NCBP2P52298 156 aaKnown RBP eCLIP13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 MANFP55145 182 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 PCBP4P57723 403 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 SLC25A3Q00325 362 aa13.25□□□□□ -0.29
HERPUD1-203ENST00000379792 OCA2Q04671 838 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms