RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 ATF6P18850 670 aa16.67■□□□□ 0.26
PTPRU-202ENST00000373779 ILF3Q12906 894 aaKnown RBP eCLIP16.67■□□□□ 0.26
PTPRU-202ENST00000373779 TMEM207Q6UWW9 146 aa16.67■□□□□ 0.26
PTPRU-202ENST00000373779 FATE1Q969F0 183 aa16.67■□□□□ 0.26
PTPRU-202ENST00000373779 TMEM19Q96HH6 336 aa16.67■□□□□ 0.26
PTPRU-202ENST00000373779 CPPED1Q9BRF8 314 aaPredicted RBP16.67■□□□□ 0.26
PTPRU-202ENST00000373779 OR7A17O14581 309 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 IFNA6P05013 189 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 HK1P19367 917 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 ERVK-21P61565 698 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 OLFML2AQ68BL7 652 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 Q6ZSR9 355 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 CBLL1Q75N03 491 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 LHFPL3Q86UP9 236 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 GID4Q8IVV7 300 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 BPIFB1Q8TDL5 484 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 ZNF689Q96CS4 500 aaPredicted RBP16.66■□□□□ 0.26
PTPRU-202ENST00000373779 TUBB1Q9H4B7 451 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 SLCO3A1Q9UIG8 710 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 RWDD3Q9Y3V2 267 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 HSF5Q4G112 596 aaPredicted RBP16.66■□□□□ 0.26
PTPRU-202ENST00000373779 ZNF613Q6PF04 617 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 MED31Q9Y3C7 131 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 TSPAN4O14817 238 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 SEC14L2O76054 403 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 SLC16A8O95907 504 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 MAZP56270 477 aaKnown RBP16.66■□□□□ 0.26
PTPRU-202ENST00000373779 CCDC157Q569K6 752 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 ABHD13Q7L211 337 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 FAM217AQ8IXS0 508 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 GPR26Q8NDV2 337 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 MCCC1Q96RQ3 725 aaPredicted RBP16.66■□□□□ 0.26
PTPRU-202ENST00000373779 WDR45Q9Y484 360 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 ANKRD12Q6UB98 2062 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 TRAV6A0A075B6T7 132 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 TMEM189-UBE2V1I3L0A0 370 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 RNASET2O00584 256 aaKnown RBP16.66■□□□□ 0.26
PTPRU-202ENST00000373779 GMFGO60234 142 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 SAMD12Q8N8I0 201 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 F2RL3Q96RI0 385 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 C14orf105Q9NVL8 296 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 ANKMY1Q9P2S6 941 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 PGAP2Q9UHJ9 254 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 STRCQ7RTU9 1775 aa16.66■□□□□ 0.26
PTPRU-202ENST00000373779 GPR37L1O60883 481 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 ZNF8P17098 575 aaPredicted RBP16.65■□□□□ 0.26
PTPRU-202ENST00000373779 NRIP1P48552 1158 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 SLC9A3P48764 834 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 SLC35F1Q5T1Q4 408 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 FANK1Q8TC84 345 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 SLCO4A1Q96BD0 722 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 MED11Q9P086 117 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 CLDN24A6NM45 220 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 DNASE1L1P49184 302 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 SEC13P55735 322 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 SMN1Q16637 294 aaKnown RBP16.65■□□□□ 0.26
PTPRU-202ENST00000373779 OR10H5Q8NGA6 315 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 SETD7Q8WTS6 366 aaKnown RBP16.65■□□□□ 0.26
PTPRU-202ENST00000373779 ZNF486Q96H40 463 aaPredicted RBP16.65■□□□□ 0.26
PTPRU-202ENST00000373779 IL17FQ96PD4 163 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 IFT52Q9Y366 437 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 I3L521 148 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 PROM1O43490 865 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 ADARB1P78563 741 aaKnown RBP16.65■□□□□ 0.26
PTPRU-202ENST00000373779 IER5LQ5T953 404 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 NADSYN1Q6IA69 706 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 KRT77Q7Z794 578 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 CCDC116Q8IYX3 515 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 B3GNT7Q8NFL0 401 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 SUN3Q8TAQ9 357 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 SECISBP2Q96T21 854 aaKnown RBP16.65■□□□□ 0.26
PTPRU-202ENST00000373779 CARS2Q9HA77 564 aaKnown RBP16.65■□□□□ 0.26
PTPRU-202ENST00000373779 ALPPL2P10696 532 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 ACADLP28330 430 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 HOXD12P35452 270 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 TBCEQ15813 527 aaPredicted RBP16.65■□□□□ 0.26
PTPRU-202ENST00000373779 HMGN2P46Q86SG4 172 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 OR7G3Q8NG95 312 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 FIBINQ8TAL6 211 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 DUS3LQ96G46 650 aaKnown RBP16.65■□□□□ 0.26
PTPRU-202ENST00000373779 CDADC1Q9BWV3 514 aa16.65■□□□□ 0.26
PTPRU-202ENST00000373779 ZFR2Q9UPR6 939 aaKnown RBP16.65■□□□□ 0.26
PTPRU-202ENST00000373779 TACSTD2P09758 323 aa16.64■□□□□ 0.26
PTPRU-202ENST00000373779 HLA-EP13747 358 aa16.64■□□□□ 0.26
PTPRU-202ENST00000373779 PTNP21246 168 aa16.64■□□□□ 0.26
PTPRU-202ENST00000373779 PLAG1Q6DJT9 500 aa16.64■□□□□ 0.26
PTPRU-202ENST00000373779 OR2T33Q8NG76 320 aa16.64■□□□□ 0.26
PTPRU-202ENST00000373779 RHOXF1Q8NHV9 184 aa16.64■□□□□ 0.26
PTPRU-202ENST00000373779 LRIG1Q96JA1 1093 aa16.64■□□□□ 0.26
PTPRU-202ENST00000373779 TEX37Q96LM6 180 aa16.64■□□□□ 0.26
PTPRU-202ENST00000373779 SLC35C2Q9NQQ7 365 aa16.64■□□□□ 0.26
PTPRU-202ENST00000373779 ZNF69Q9UC07 566 aa16.64■□□□□ 0.26
PTPRU-202ENST00000373779 KCNK6Q9Y257 313 aa16.64■□□□□ 0.26
PTPRU-202ENST00000373779 COL16A1Q07092 1604 aaPredicted RBP16.64■□□□□ 0.25
PTPRU-202ENST00000373779 SRCP12931 536 aa16.64■□□□□ 0.25
PTPRU-202ENST00000373779 ATF4P18848 351 aaPredicted RBP16.64■□□□□ 0.25
PTPRU-202ENST00000373779 HNRNPFP52597 415 aaKnown RBP16.64■□□□□ 0.25
PTPRU-202ENST00000373779 TLE2Q04725 743 aa16.64■□□□□ 0.25
PTPRU-202ENST00000373779 REM2Q8IYK8 340 aaPredicted RBP16.64■□□□□ 0.25
PTPRU-202ENST00000373779 CELF5Q8N6W0 485 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms