RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 MIEF1Q9NQG6 463 aa17.06■□□□□ 0.32
TRIM50-201ENST00000333149 CCDC177Q9NQR7 707 aaPredicted RBP17.06■□□□□ 0.32
TRIM50-201ENST00000333149 AHSPQ9NZD4 102 aa17.06■□□□□ 0.32
TRIM50-201ENST00000333149 ACAD8Q9UKU7 415 aa17.06■□□□□ 0.32
TRIM50-201ENST00000333149 GRIP1Q9Y3R0 1128 aa17.06■□□□□ 0.32
TRIM50-201ENST00000333149 RPL36Q9Y3U8 105 aaKnown RBP17.06■□□□□ 0.32
TRIM50-201ENST00000333149 CCDC88CQ9P219 2028 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 H3BQ06 376 aaPredicted RBP17.05■□□□□ 0.32
TRIM50-201ENST00000333149 PDE9AO76083 593 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 DDCP20711 480 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 ELAVL4P26378 380 aaKnown RBP17.05■□□□□ 0.32
TRIM50-201ENST00000333149 CRYBB2P43320 205 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 DGKGP49619 791 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 MEF2AQ02078 507 aaPredicted RBP17.05■□□□□ 0.32
TRIM50-201ENST00000333149 SEC23BQ15437 767 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 LCTLQ6UWM7 567 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 TMC5Q6UXY8 1006 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 HORMAD2Q8N7B1 307 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 NANOGP1Q8N7R0 232 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 ZNF740Q8NDX6 193 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 PROKR2Q8NFJ6 384 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 VN1R2Q8NFZ6 395 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 OR8J1Q8NGP2 316 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 CYB5D2Q8WUJ1 264 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 KCNS3Q9BQ31 491 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 BARHL1Q9BZE3 327 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 ZCCHC2Q9C0B9 1178 aaKnown RBP17.05■□□□□ 0.32
TRIM50-201ENST00000333149 LINC00597Q9H2U6 94 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 DPEP2Q9H4A9 486 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 TBC1D24Q9ULP9 559 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 PCDHGB2Q9Y5G2 931 aa17.05■□□□□ 0.32
TRIM50-201ENST00000333149 RGS13O14921 159 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 CSO75390 466 aaKnown RBP17.04■□□□□ 0.32
TRIM50-201ENST00000333149 SEMA3DO95025 777 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 S100A1P23297 94 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 DDX6P26196 483 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRIM50-201ENST00000333149 POU1F1P28069 291 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 BMPR1AP36894 532 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 FRKP42685 505 aaPredicted RBP17.04■□□□□ 0.32
TRIM50-201ENST00000333149 GRIN2CQ14957 1233 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 LY6G5CQ5SRR4 150 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 SLC25A30Q5SVS4 291 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 DCST1Q5T197 706 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 PRR23CQ6ZRP0 262 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 TMCO2Q7Z6W1 182 aaPredicted RBP17.04■□□□□ 0.32
TRIM50-201ENST00000333149 UBQLNLQ8IYU4 475 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 CELF2-AS1Q8N7Q2 184 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 SORCS1Q8WY21 1168 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 TEFMQ96QE5 360 aaKnown RBP17.04■□□□□ 0.32
TRIM50-201ENST00000333149 IL4I1Q96RQ9 567 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 ZNF717Q9BY31 904 aaPredicted RBP17.04■□□□□ 0.32
TRIM50-201ENST00000333149 RHBGQ9H310 441 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 MARK1Q9P0L2 795 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 SNX8Q9Y5X2 465 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 C5orf58C9J3I9 102 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 ZNF670-ZNF695F2Z2N8 137 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 FAM227AF5H4B4 570 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 CAPN5O15484 640 aaPredicted RBP17.04■□□□□ 0.32
TRIM50-201ENST00000333149 PSMA1P25786 263 aaKnown RBP17.04■□□□□ 0.32
TRIM50-201ENST00000333149 PPM1AP35813 382 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 KCNJ5P48544 419 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 RORCP51449 518 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 WDR5P61964 334 aaKnown RBP17.04■□□□□ 0.32
TRIM50-201ENST00000333149 ALDH6A1Q02252 535 aaKnown RBP17.04■□□□□ 0.32
TRIM50-201ENST00000333149 TP53BP2Q13625 1128 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 TSTA3Q13630 321 aaPredicted RBP17.04■□□□□ 0.32
TRIM50-201ENST00000333149 SF3B4Q15427 424 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRIM50-201ENST00000333149 LEXMQ3ZCV2 418 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 MFSD4BQ5TF39 518 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 ZNF765Q7L2R6 523 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 PARS2Q7L3T8 475 aaKnown RBP17.04■□□□□ 0.32
TRIM50-201ENST00000333149 MMP21Q8N119 569 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 CLIP4Q8N3C7 705 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 LMNTD1Q8N9Z9 388 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 KREMEN2Q8NCW0 462 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 ZNF764Q96H86 408 aaPredicted RBP17.04■□□□□ 0.32
TRIM50-201ENST00000333149 TMEM19Q96HH6 336 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 SLC6A18Q96N87 628 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 CNPPD1Q9BV87 410 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 MND1Q9BWT6 205 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 MTG2Q9H4K7 406 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 SLAMF7Q9NQ25 335 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 NDUFB11Q9NX14 153 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 TBC1D14Q9P2M4 693 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 STUB1Q9UNE7 303 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 V9GYH0 126 aa17.04■□□□□ 0.32
TRIM50-201ENST00000333149 MMP20O60882 483 aa17.03■□□□□ 0.32
TRIM50-201ENST00000333149 PAPLNO95428 1278 aa17.03■□□□□ 0.32
TRIM50-201ENST00000333149 TBX6O95947 436 aaPredicted RBP17.03■□□□□ 0.32
TRIM50-201ENST00000333149 H1F0P07305 194 aaKnown RBP17.03■□□□□ 0.32
TRIM50-201ENST00000333149 ACRP10323 421 aa17.03■□□□□ 0.32
TRIM50-201ENST00000333149 HTR3AP46098 478 aa17.03■□□□□ 0.32
TRIM50-201ENST00000333149 EPHA5P54756 1037 aa17.03■□□□□ 0.32
TRIM50-201ENST00000333149 SMIM11AP58511 58 aa17.03■□□□□ 0.32
TRIM50-201ENST00000333149 MLLT11Q13015 90 aaPredicted RBP17.03■□□□□ 0.32
TRIM50-201ENST00000333149 ZNF544Q6NX49 715 aa17.03■□□□□ 0.32
TRIM50-201ENST00000333149 CD300LDQ6UXZ3 194 aa17.03■□□□□ 0.32
TRIM50-201ENST00000333149 KRT78Q8N1N4 520 aa17.03■□□□□ 0.32
TRIM50-201ENST00000333149 ASB15Q8WXK1 588 aa17.03■□□□□ 0.32
TRIM50-201ENST00000333149 TM4SF18Q96CE8 201 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms