RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 MELKQ14680 651 aa11.62□□□□□ -0.55
PCF11-201ENST00000298281 VWA5B1Q5TIE3 1220 aa11.62□□□□□ -0.55
PCF11-201ENST00000298281 MMAAQ8IVH4 418 aaKnown RBP11.62□□□□□ -0.55
PCF11-201ENST00000298281 PROKR1Q8TCW9 393 aa11.62□□□□□ -0.55
PCF11-201ENST00000298281 UTS2RQ9UKP6 389 aa11.62□□□□□ -0.55
PCF11-201ENST00000298281 BCL9LQ86UU0 1499 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 CA12O43570 354 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 CDK2P24941 298 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 DSC3Q14574 896 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 COL28A1Q2UY09 1125 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 SMYD5Q6GMV2 418 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 LRRC57Q8N9N7 239 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 ACOT11Q8WXI4 607 aaPredicted RBP11.61□□□□□ -0.55
PCF11-201ENST00000298281 NSMAFQ92636 917 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 POLE4Q9NR33 117 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 SLC2A4RGQ9NR83 387 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 CDC123O75794 336 aaPredicted RBP11.61□□□□□ -0.55
PCF11-201ENST00000298281 KLK1P06870 262 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 S1PR1P21453 382 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 CYP1B1Q16678 543 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 MYLK3Q32MK0 819 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 BAIAP2L2Q6UXY1 529 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 MARCH9Q86YJ5 346 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 CCDC116Q8IYX3 515 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 OR4E2Q8NGC2 313 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 ASB9Q96DX5 294 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 ZNF559Q9BR84 538 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 ZFR2Q9UPR6 939 aaKnown RBP11.61□□□□□ -0.55
PCF11-201ENST00000298281 WDR45Q9Y484 360 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 OAS1P00973 400 aaKnown RBP11.61□□□□□ -0.55
PCF11-201ENST00000298281 DEFA4P12838 97 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 RPL26P61254 145 aaKnown RBP11.61□□□□□ -0.55
PCF11-201ENST00000298281 SEMG2Q02383 582 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 ZNF33AQ06730 810 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 FAM69BQ5VUD6 431 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 KCNH6Q9H252 994 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 EME2A4GXA9 379 aaPredicted RBP11.61□□□□□ -0.55
PCF11-201ENST00000298281 ALDOBP05062 364 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 CD36P16671 472 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 GJA5P36382 358 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 GABRA2P47869 451 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 GRB2P62993 217 aaKnown RBP11.61□□□□□ -0.55
PCF11-201ENST00000298281 ZNF460Q14592 562 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 DHCR24Q15392 516 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 ZNF767PQ75MW2 155 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 ZNF439Q8NDP4 499 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 PLEKHO2Q8TD55 490 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 GTF2H4Q92759 462 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 COG8Q96MW5 612 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 SPATA31D1Q6ZQQ2 1576 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 KNL1Q8NG31 2342 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 GLTPD2A6NH11 291 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 EXOSC6Q5RKV6 272 aaKnown RBP11.61□□□□□ -0.55
PCF11-201ENST00000298281 SPRYD7Q5W111 196 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 PGAP3Q96FM1 320 aaPredicted RBP11.61□□□□□ -0.55
PCF11-201ENST00000298281 DYNLRB1Q9NP97 96 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 GPATCH2Q9NW75 528 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 ARVCFO00192 962 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 F8A1P23610 371 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 PEX2P28328 305 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 VIPR1P32241 457 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 RFC2P35250 354 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 APLNRP35414 380 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 CD79BP40259 229 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 MTPNP58546 118 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 PMS2P3Q13401 168 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 ZNF267Q14586 743 aaPredicted RBP11.61□□□□□ -0.55
PCF11-201ENST00000298281 TRAM1L1Q8N609 369 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 SH3RF2Q8TEC5 729 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 DDX1Q92499 740 aaKnown RBP11.61□□□□□ -0.55
PCF11-201ENST00000298281 TLCD1Q96CP7 247 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 INSL6Q9Y581 213 aa11.61□□□□□ -0.55
PCF11-201ENST00000298281 HLA-DPB1P04440 258 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 KCNC1P48547 511 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 CAMLGP49069 296 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 DLX2Q07687 328 aaPredicted RBP11.6□□□□□ -0.55
PCF11-201ENST00000298281 GPM6BQ13491 265 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 OR2T5Q6IEZ7 315 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 BPHLQ86WA6 291 aaPredicted RBP11.6□□□□□ -0.55
PCF11-201ENST00000298281 LGI4Q8N135 537 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 CELF5Q8N6W0 485 aaKnown RBP11.6□□□□□ -0.55
PCF11-201ENST00000298281 MTMR14Q8NCE2 650 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 OR2T29Q8NH02 315 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 TSNAXQ99598 290 aaKnown RBP11.6□□□□□ -0.55
PCF11-201ENST00000298281 COQ10BQ9H8M1 238 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 CDH20Q9HBT6 801 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 PSAT1Q9Y617 370 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 SEC14L5O43304 696 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 GKN3PP0CG01 181 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 MATN1P21941 496 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 TM4SF1P30408 202 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 GCH1P30793 250 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 AAK1Q2M2I8 961 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 SLC10A6Q3KNW5 377 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 PRR22Q8IZ63 422 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 OR5AK3PQ8NH89 298 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 PXYLP1Q8TE99 480 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 ZNF75AQ96N20 296 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 TMEM175Q9BSA9 504 aa11.6□□□□□ -0.55
PCF11-201ENST00000298281 BCO2Q9BYV7 579 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms