RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 CLDN22Q8N7P3 220 aa14.11□□□□□ -0.15
CCT3-201ENST00000295688 FAM181AQ8N9Y4 354 aa14.11□□□□□ -0.15
CCT3-201ENST00000295688 HCAR2Q8TDS4 363 aa14.11□□□□□ -0.15
CCT3-201ENST00000295688 AP2M1Q96CW1 435 aa14.11□□□□□ -0.15
CCT3-201ENST00000295688 ZNF607Q96SK3 696 aa14.11□□□□□ -0.15
CCT3-201ENST00000295688 SRRQ9GZT4 340 aa14.11□□□□□ -0.15
CCT3-201ENST00000295688 SLC22A4Q9H015 551 aa14.11□□□□□ -0.15
CCT3-201ENST00000295688 POLR2J3Q9H1A7 115 aaKnown RBP14.11□□□□□ -0.15
CCT3-201ENST00000295688 SNTG1Q9NSN8 517 aa14.11□□□□□ -0.15
CCT3-201ENST00000295688 SNX7Q9UNH6 387 aa14.11□□□□□ -0.15
CCT3-201ENST00000295688 HELZP42694 1942 aaKnown RBP14.11□□□□□ -0.15
CCT3-201ENST00000295688 IRGMA1A4Y4 181 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 SAP18O00422 153 aaKnown RBP14.1□□□□□ -0.15
CCT3-201ENST00000295688 FFAR1O14842 300 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 PI15O43692 258 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 LEFTY1O75610 366 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 KLHL18O94889 574 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 LRG1P02750 347 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 CKMT1AP12532 417 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 IL7P13232 177 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 ELAVL4P26378 380 aaKnown RBP14.1□□□□□ -0.15
CCT3-201ENST00000295688 SOX3P41225 446 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 ZNF91Q05481 1191 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 COX10Q12887 443 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 ASAH1Q13510 395 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 LARS2Q15031 903 aaKnown RBP14.1□□□□□ -0.15
CCT3-201ENST00000295688 NDUFA9Q16795 377 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 ARSIQ5FYB1 569 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 ASTLQ6HA08 431 aaPredicted RBP14.1□□□□□ -0.15
CCT3-201ENST00000295688 HSDL2Q6YN16 418 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 DDX53Q86TM3 631 aaKnown RBP14.1□□□□□ -0.15
CCT3-201ENST00000295688 KRT78Q8N1N4 520 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 LILRA3Q8N6C8 439 aaPredicted RBP14.1□□□□□ -0.15
CCT3-201ENST00000295688 GDPD1Q8N9F7 314 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 ZNF689Q96CS4 500 aaPredicted RBP14.1□□□□□ -0.15
CCT3-201ENST00000295688 PHOX2BQ99453 314 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 TSSK6Q9BXA6 273 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 ZCCHC2Q9C0B9 1178 aaKnown RBP14.1□□□□□ -0.15
CCT3-201ENST00000295688 CXorf36Q9H7Y0 433 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 HMX1Q9NP08 348 aaPredicted RBP14.1□□□□□ -0.15
CCT3-201ENST00000295688 DNAJC27Q9NZQ0 273 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 TAAR2Q9P1P5 351 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 DKK3Q9UBP4 350 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 MUTYHQ9UIF7 546 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 CCDC88CQ9P219 2028 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 SSX4O60224 188 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 GUCY1B2O75343 617 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 PBLDP30039 288 aaPredicted RBP14.1□□□□□ -0.15
CCT3-201ENST00000295688 CAP1Q01518 475 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 SLC25A30Q5SVS4 291 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 TMC8Q8IU68 726 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 FAM26EQ8N5C1 309 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 RAET1EQ8TD07 263 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 PXYLP1Q8TE99 480 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 SLC38A5Q8WUX1 472 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 LRIG1Q96JA1 1093 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 ZNF354BQ96LW1 612 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 NEUROD4Q9HD90 331 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 CLEC2DQ9UHP7 191 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 HCN2Q9UL51 889 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 DIMT1Q9UNQ2 313 aaKnown RBP14.1□□□□□ -0.15
CCT3-201ENST00000295688 SNX11Q9Y5W9 270 aa14.1□□□□□ -0.15
CCT3-201ENST00000295688 MEIOCA2RUB1 952 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 SH3BP5O60239 455 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 TPST2O60704 377 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 MMP20O60882 483 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 ALX3O95076 343 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 BCHEP06276 602 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 RFX2P48378 723 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 KLHL22Q53GT1 634 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 TCTN3Q6NUS6 607 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.09□□□□□ -0.151e-6■■■□□ 15
CCT3-201ENST00000295688 TMEM25Q86YD3 366 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 GPR65Q8IYL9 337 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 CFAP206Q8IYR0 622 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 VANGL1Q8TAA9 524 aaPredicted RBP14.09□□□□□ -0.15
CCT3-201ENST00000295688 SLC25A46Q96AG3 418 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 KIAA1143Q96AT1 154 aaPredicted RBP14.09□□□□□ -0.15
CCT3-201ENST00000295688 TMEM19Q96HH6 336 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 SCLYQ96I15 445 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 RNF170Q96K19 258 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 POLDIP3Q9BY77 421 aaKnown RBP14.09□□□□□ -0.15
CCT3-201ENST00000295688 KLHL20Q9Y2M5 609 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 SCN5AQ14524 2016 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 KIF26AQ9ULI4 1882 aaPredicted RBP14.09□□□□□ -0.15
CCT3-201ENST00000295688 CCDC182A6NF36 153 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 ANKDD1BA6NHY2 528 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 TNFRSF10AO00220 468 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 SEC14L5O43304 696 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 CYP7B1O75881 506 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 RAB36O95755 333 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 ELFN1P0C7U0 828 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 DDCP20711 480 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 KCNJ5P48544 419 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 MANFP55145 182 aaKnown RBP14.09□□□□□ -0.15
CCT3-201ENST00000295688 TAP2Q03519 686 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 ZNF79Q15937 498 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 PRSS53Q2L4Q9 553 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 LEXMQ3ZCV2 418 aa14.09□□□□□ -0.15
CCT3-201ENST00000295688 TRIM60Q495X7 471 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms