RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 DIABLOQ9NR28 239 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 GPR34Q9UPC5 381 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 ZNF860A6NHJ4 632 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 ARSAP15289 507 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 CTSCP53634 463 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 ELOCQ15369 112 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 SLC36A3Q495N2 470 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 OR52E8Q6IFG1 317 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 ARL9Q6T311 187 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 UGT2A3Q6UWM9 527 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 ATCAYQ86WG3 371 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 KLHDC8AQ8IYD2 350 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 TRNT1Q96Q11 434 aaKnown RBP15.99■□□□□ 0.15
PHRF1-201ENST00000264555 MED28Q9H204 178 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 PHOSPHO2Q8TCD6 241 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 TESCQ96BS2 214 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 TMEM19Q96HH6 336 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 TMED9Q9BVK6 235 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 LGR4Q9BXB1 951 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 DNMT3AQ9Y6K1 912 aaPredicted RBP15.99■□□□□ 0.15
PHRF1-201ENST00000264555 ANHXE9PGG2 379 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 PRLP01236 227 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 GHDCQ8N2G8 530 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 OR8K5Q8NH50 307 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 JPH3Q8WXH2 748 aaPredicted RBP15.98■□□□□ 0.15
PHRF1-201ENST00000264555 TFAP2CQ92754 450 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 SP140LQ9H930 580 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 PCDHGA12O60330 932 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 CA3P07451 260 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 C1SP09871 688 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 SLC15A1P46059 708 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 MLLT1Q03111 559 aaPredicted RBP15.98■□□□□ 0.15
PHRF1-201ENST00000264555 LSAMPQ13449 338 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 SLC25A36Q96CQ1 311 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 SLC35C2Q9NQQ7 365 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 SHANK3Q9BYB0 1731 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 SLC2A2P11168 524 aaPredicted RBP15.98■□□□□ 0.15
PHRF1-201ENST00000264555 PRLHRP49683 370 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 PROKR2Q8NFJ6 384 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 FOXJ1Q92949 421 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 CDCA3Q99618 268 aaPredicted RBP15.98■□□□□ 0.15
PHRF1-201ENST00000264555 TLX3O43711 291 aaPredicted RBP15.98■□□□□ 0.15
PHRF1-201ENST00000264555 SOX30O94993 753 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 ARNTP27540 789 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 PPP3R1P63098 170 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 CSTF1Q05048 431 aaKnown RBP15.98■□□□□ 0.15
PHRF1-201ENST00000264555 NDUFA5Q16718 116 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 UGT3A2Q3SY77 523 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 FLYWCH1Q4VC44 716 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 ZNF551Q7Z340 670 aaPredicted RBP15.98■□□□□ 0.15
PHRF1-201ENST00000264555 TMEM173Q86WV6 379 aaPredicted RBP15.98■□□□□ 0.15
PHRF1-201ENST00000264555 UBE2J2Q8N2K1 259 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 TMEM30AQ9NV96 361 aa15.98■□□□□ 0.15
PHRF1-201ENST00000264555 SELENOWP63302 87 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 ZNF267Q14586 743 aaPredicted RBP15.97■□□□□ 0.15
PHRF1-201ENST00000264555 ZFP3Q96NJ6 502 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 CYP8B1Q9UNU6 501 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 ENPP4Q9Y6X5 453 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 PCGF2P35227 344 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 GMFBP60983 142 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 ZNF550Q7Z398 422 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 MFSD2AQ8NA29 543 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 OR52P1PQ8NH57 321 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 FRS2Q8WU20 508 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 SLC22A12Q96S37 553 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 GPER1Q99527 375 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 SLC30A2Q9BRI3 323 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 FZD3Q9NPG1 666 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 DKK3Q9UBP4 350 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 ITGA10O75578 1167 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 HK1P19367 917 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 TPTEP56180 551 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 ZXDBP98169 803 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 ARHGAP19Q14CB8 494 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 NDUFAF5Q5TEU4 345 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 GID4Q8IVV7 300 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 OLIG1Q8TAK6 271 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 SCML1Q9UN30 329 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 ARL6IP5O75915 188 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 OR2B6P58173 313 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 CLCA4Q14CN2 919 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 OR2L2Q8NH16 312 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 PHOSPHO1Q8TCT1 267 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 GTF2H4Q92759 462 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 MAELQ96JY0 434 aaKnown RBP15.97■□□□□ 0.15
PHRF1-201ENST00000264555 PCDHGB5Q9Y5G0 923 aa15.97■□□□□ 0.15
PHRF1-201ENST00000264555 MITFO75030 526 aaPredicted RBP15.96■□□□□ 0.15
PHRF1-201ENST00000264555 ADAP00813 363 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 GABRA3P34903 492 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 BCAP31P51572 246 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 TAS2R43P59537 309 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 FANK1Q8TC84 345 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 ZSWIM3Q96MP5 696 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 PRTFDC1Q9NRG1 225 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 SCN9AQ15858 1988 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 IFNA6P05013 189 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 CYP17A1P05093 508 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 ARRB1P49407 418 aaPredicted RBP15.96■□□□□ 0.15
PHRF1-201ENST00000264555 HYAL2Q12891 473 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 CES4AQ5XG92 561 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms