RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 HIST1H2AGP0C0S8 130 aaPredicted RBP4.49□□□□□ -1.69
LINC00397-202ENST00000606785 ZCCHC18P0CG32 403 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 T-ENOLP0DO92 83 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 RPL35AP18077 110 aaKnown RBP4.49□□□□□ -1.69
LINC00397-202ENST00000606785 GPX3P22352 226 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 SLC6A8P48029 635 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 IFNAR2P48551 515 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 THBS3P49746 956 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 ARFIP1P53367 373 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 DRP2Q13474 957 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 RAPSNQ13702 412 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 TMEM132DQ14C87 1099 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 EXOSC7Q15024 291 aaKnown RBP4.49□□□□□ -1.69
LINC00397-202ENST00000606785 KIAA1644Q3SXP7 199 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 C9orf50Q5SZB4 431 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 ATP1A1-AS1Q5TC04 95 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 CAPN13Q6MZZ7 669 aaPredicted RBP4.49□□□□□ -1.69
LINC00397-202ENST00000606785 ARMCX2Q7L311 632 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 ZNF573Q86YE8 665 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.49□□□□□ -1.69
LINC00397-202ENST00000606785 CERS5Q8N5B7 392 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 COLGALT1Q8NBJ5 622 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 OR2T11Q8NH01 316 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 LMO3Q8TAP4 145 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 THRSPQ92748 146 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 N4BP2L2Q92802 583 aaPredicted RBP4.49□□□□□ -1.69
LINC00397-202ENST00000606785 HIST1H2ACQ93077 130 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 GIMAP5Q96F15 307 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 ZNF274Q96GC6 653 aaPredicted RBP4.49□□□□□ -1.69
LINC00397-202ENST00000606785 ERGIC2Q96RQ1 377 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 TXN2Q99757 166 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 ATP13A3Q9H7F0 1226 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 ACTR8Q9H981 624 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 VAT1LQ9HCJ6 419 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 S100A14Q9HCY8 104 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.49□□□□□ -1.69
LINC00397-202ENST00000606785 SELENOKQ9Y6D0 94 aa4.49□□□□□ -1.69
LINC00397-202ENST00000606785 EIF4G1Q04637 1599 aaKnown RBP4.48□□□□□ -1.69
LINC00397-202ENST00000606785 FAM230AA0A1W2PPH8 454 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 KRTAP29-1A8MX34 341 aaPredicted RBP4.48□□□□□ -1.69
LINC00397-202ENST00000606785 SLC1A7O00341 560 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 LANCL1O43813 399 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 NADKO95544 446 aaPredicted RBP4.48□□□□□ -1.69
LINC00397-202ENST00000606785 CLPTM1O96005 669 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 CRYAAP02489 173 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 KRT8P05787 483 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 FAM157CP0CG43 387 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 KRT13P13646 458 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 CAPN2P17655 700 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 CYP2F1P24903 491 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 PRDX2P32119 198 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 KRTAP10-9P60411 292 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 HSF2Q03933 536 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 FUT7Q11130 342 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 OVGP1Q12889 678 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 CCDC6Q16204 474 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 FAM106AQ4KMX7 169 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 AGKQ53H12 422 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 ARHGEF16Q5VV41 709 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 LIPJQ5W064 366 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 RTL6Q6ICC9 239 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 CDC42EP5Q6NZY7 148 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 ZNF790Q6PG37 636 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 KDELC1Q6UW63 502 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 GDPD4Q6W3E5 623 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 ZNF771Q7L3S4 317 aaPredicted RBP4.48□□□□□ -1.69
LINC00397-202ENST00000606785 SLC22A16Q86VW1 577 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 C17orf64Q86WR6 236 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 MISPQ8IVT2 679 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 MYOCDQ8IZQ8 938 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 RFLNBQ8N5W9 214 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 GPR148Q8TDV2 347 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 GATAD1Q8WUU5 269 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 ZNRF4Q8WWF5 429 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 ZNF606Q8WXB4 792 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 SUSD6Q92537 303 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 PHYHIPQ92561 330 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 NCLNQ969V3 563 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 OMA1Q96E52 524 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 THOC3Q96J01 351 aaKnown RBP4.48□□□□□ -1.69
LINC00397-202ENST00000606785 MARK4Q96L34 752 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 JPH2Q9BR39 696 aaPredicted RBP4.48□□□□□ -1.69
LINC00397-202ENST00000606785 FICDQ9BVA6 458 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 TPPP3Q9BW30 176 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 WWP1Q9H0M0 922 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 NT5C3AQ9H0P0 336 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 RPAP3Q9H6T3 665 aaPredicted RBP4.48□□□□□ -1.69
LINC00397-202ENST00000606785 SLC52A3Q9NQ40 469 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 MAN2C1Q9NTJ4 1040 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 TECRQ9NZ01 308 aaKnown RBP4.48□□□□□ -1.69
LINC00397-202ENST00000606785 C6orf203Q9P0P8 240 aaPredicted RBP4.48□□□□□ -1.69
LINC00397-202ENST00000606785 ERVK-18Q9QC07 812 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 ATXN10Q9UBB4 475 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 PCSK1NQ9UHG2 260 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 LAMP5Q9UJQ1 280 aa4.48□□□□□ -1.69
LINC00397-202ENST00000606785 DIMT1Q9UNQ2 313 aaKnown RBP4.48□□□□□ -1.69
LINC00397-202ENST00000606785 ZMYM6O95789 1325 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 MSGN1A6NI15 193 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 YJEFN3A6XGL0 299 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 LMO7DNF2Z398 122 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms