RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 FOXO1Q12778 655 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 HYAL4Q2M3T9 481 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 CATSPEREQ5SY80 951 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 WLSQ5T9L3 541 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 SYT10Q6XYQ8 523 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 C3orf62Q6ZUJ4 267 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 SEM1Q6ZVN7 128 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 CHSY3Q70JA7 882 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 SLC5A11Q8WWX8 675 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 OR4K3Q96R72 315 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 RASL10BQ96S79 203 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 FAM173AQ9BQD7 235 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 CCDC77Q9BR77 488 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 CAPS2Q9BXY5 557 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 DERL2Q9GZP9 239 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 PELI2Q9HAT8 420 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 ALKBH4Q9NXW9 302 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 GRHL1Q9NZI5 618 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 MYOTQ9UBF9 498 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 CTNNAL1Q9UBT7 734 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 ATP6AP2A0A1C7CYW4 349 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 FAM47E-STBD1D6RA91 191 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 ATP6AP2O75787 350 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 SSTR1P30872 391 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 GP5P40197 560 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 CKAP4Q07065 602 aaKnown RBP16.02■□□□□ 0.16
RETREG3-210ENST00000590541 C2orf54Q08AI8 447 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 CDKL4Q5MAI5 379 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 FRA10AC1Q70Z53 315 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 THOC6Q86W42 341 aaKnown RBP16.02■□□□□ 0.16
RETREG3-210ENST00000590541 TCAIMQ8N3R3 496 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 ANKRD53Q8N9V6 530 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 TRPV3Q8NET8 790 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 NUDT8Q8WV74 236 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 NEIL2Q969S2 332 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 SARAFQ96BY9 339 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 SCYL1Q96KG9 808 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 EGFL8Q99944 293 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 AIF1LQ9BQI0 150 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 AICDAQ9GZX7 198 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 KLHL31Q9H511 634 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 PLEKHF2Q9H8W4 249 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 SPRR3Q9UBC9 169 aa16.02■□□□□ 0.16
RETREG3-210ENST00000590541 EML6Q6ZMW3 1958 aa16.02■□□□□ 0.15
RETREG3-210ENST00000590541 TCRBV9S1A1TA0A576 114 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 FAM159BA6NKW6 160 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 WWP2O00308 870 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 CDC7O00311 574 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 GABRA1P14867 456 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 STMN1P16949 149 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 TACR1P25103 407 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 SPRP35270 261 aaPredicted RBP16.01■□□□□ 0.15
RETREG3-210ENST00000590541 DNASE1L1P49184 302 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 ASCL1P50553 236 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 PGGT1BP53609 377 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 PLTPP55058 493 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 NAB1Q13506 487 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 SLC10A1Q14973 349 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 KLHDC8AQ8IYD2 350 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 NAXEQ8NCW5 288 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 SREK1Q8WXA9 508 aaKnown RBP16.01■□□□□ 0.15
RETREG3-210ENST00000590541 RNASE6Q93091 150 aaKnown RBP16.01■□□□□ 0.15
RETREG3-210ENST00000590541 GPR22Q99680 433 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 RBBP8Q99708 897 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 PITHD1Q9GZP4 211 aaPredicted RBP16.01■□□□□ 0.15
RETREG3-210ENST00000590541 LDAHQ9H6V9 325 aa16.01■□□□□ 0.15
RETREG3-210ENST00000590541 SEMA4BQ9NPR2 832 aaPredicted RBP16.01■□□□□ 0.15
RETREG3-210ENST00000590541 TUBA8Q9NY65 449 aaPredicted RBP16.01■□□□□ 0.15
RETREG3-210ENST00000590541 ARHGAP21Q5T5U3 1957 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 NPEPPSL1A6NEC2 478 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 HSPB2A8KAH6 182 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 HCN1O60741 890 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 ZNF354AO60765 605 aaPredicted RBP16■□□□□ 0.15
RETREG3-210ENST00000590541 LY6G6DO95868 133 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 GNAZP19086 355 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 BMP5P22003 454 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 GSTM2P28161 218 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 STX2P32856 288 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 HNRNPFP52597 415 aaKnown RBP16■□□□□ 0.15
RETREG3-210ENST00000590541 ATP6V0D1P61421 351 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 MRPS25P82663 173 aaKnown RBP16■□□□□ 0.15
RETREG3-210ENST00000590541 TSNQ15631 228 aaKnown RBP16■□□□□ 0.15
RETREG3-210ENST00000590541 HSPB2Q16082 182 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 FBXL19-AS1Q494R0 122 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 GRTP1Q5TC63 336 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 NXPE4Q6UWF7 544 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 RTL4Q6ZR62 310 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 CAPN12Q6ZSI9 719 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 FAM47EQ6ZV65 393 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 TMEM52Q8NDY8 209 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 TTLQ8NG68 377 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 ANKRD49Q8WVL7 239 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 REPIN1Q9BWE0 567 aaKnown RBP16■□□□□ 0.15
RETREG3-210ENST00000590541 CNOT10Q9H9A5 744 aaKnown RBP16■□□□□ 0.15
RETREG3-210ENST00000590541 NEUROD4Q9HD90 331 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 PRTFDC1Q9NRG1 225 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 SMYD2Q9NRG4 433 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 IKZF3Q9UKT9 509 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 SLC22A14Q9Y267 594 aa16■□□□□ 0.15
RETREG3-210ENST00000590541 MTO1Q9Y2Z2 717 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms