RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ALOXE3Q9BYJ1 711 aa15.61■□□□□ 0.09
USB1-211ENST00000565662 RPF2Q9H7B2 306 aaKnown RBP15.61■□□□□ 0.09
USB1-211ENST00000565662 KCMF1Q9P0J7 381 aa15.61■□□□□ 0.09
USB1-211ENST00000565662 ADAM29Q9UKF5 820 aa15.61■□□□□ 0.09
USB1-211ENST00000565662 SVILO95425 2214 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 CCDC151A5D8V7 595 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 A8MVJ9 347 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 TRIM49D1C9J1S8 452 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 LRRTM2O43300 516 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 ITGA10O75578 1167 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 UNC5CO95185 931 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 F10P00742 488 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 GSTA1P08263 222 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 TNNI3P19429 210 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 IGLV3-21P80748 117 aaPredicted RBP15.6■□□□□ 0.09
USB1-211ENST00000565662 DDX39BQ13838 428 aaKnown RBP15.6■□□□□ 0.09
USB1-211ENST00000565662 MAPKAPK3Q16644 382 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 TTC19Q6DKK2 380 aaPredicted RBP15.6■□□□□ 0.09
USB1-211ENST00000565662 RGS9BPQ6ZS82 235 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 GALNTL5Q7Z4T8 443 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 SLC22A9Q8IVM8 553 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 DCAKDQ8WVC6 231 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 RBM18Q96H35 190 aaKnown RBP15.6■□□□□ 0.09
USB1-211ENST00000565662 SGCZQ96LD1 299 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 FRMD6Q96NE9 622 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 SIGLEC12Q96PQ1 595 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 NPAS2Q99743 824 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 C1QTNF3Q9BXJ4 246 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 RUBCNLQ9H714 662 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 HPF1Q9NWY4 346 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 PSMC3IPQ9P2W1 217 aaPredicted RBP15.6■□□□□ 0.09
USB1-211ENST00000565662 NFU1Q9UMS0 254 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 SNX6Q9UNH7 406 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 ASB1Q9Y576 335 aa15.6■□□□□ 0.09
USB1-211ENST00000565662 ARHGAP10A1A4S6 786 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 H3BQF6 201 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 ACOT7O00154 380 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 PLPP1O14494 284 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 DNAJB6O75190 326 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 NR2F6P10588 404 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 STT3AP46977 705 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 GPR143P51810 404 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 SLAMF1Q13291 335 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 CPSF6Q16630 551 aaKnown RBP eCLIP15.59■□□□□ 0.09
USB1-211ENST00000565662 C6orf163Q5TEZ5 329 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 FRG2Q64ET8 278 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 SPINK14Q6IE38 97 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 PAOXQ6QHF9 649 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 ADGRD1Q6QNK2 874 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 OPN5Q6U736 354 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 ZNF793Q6ZN11 406 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 ST13P4Q8IZP2 240 aaPredicted RBP15.59■□□□□ 0.09
USB1-211ENST00000565662 KIF2BQ8N4N8 673 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 GOLM1Q8NBJ4 401 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 NUBPLQ8TB37 319 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 WDR20Q8TBZ3 569 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 ASB15Q8WXK1 588 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 CCDC126Q96EE4 140 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 FRG2BQ96QU4 278 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 CSF3RQ99062 836 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 MTERF1Q99551 399 aaKnown RBP15.59■□□□□ 0.09
USB1-211ENST00000565662 MAPKAP1Q9BPZ7 522 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 ELOVL6Q9H5J4 265 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 DDX31Q9H8H2 851 aaKnown RBP15.59■□□□□ 0.09
USB1-211ENST00000565662 BRF2Q9HAW0 419 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 KLHL1Q9NR64 748 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 MYOTQ9UBF9 498 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 PCTPQ9UKL6 214 aa15.59■□□□□ 0.09
USB1-211ENST00000565662 ICE1Q9Y2F5 2266 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 OR6C76A6NM76 312 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 A8MUA0 341 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 C17orf105B2RV13 164 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 RIPK2O43353 540 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 RPS17P08708 135 aaKnown RBP15.58■□□□□ 0.08
USB1-211ENST00000565662 HSD3B1P14060 373 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 AGAP20933 346 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 HSD3B2P26439 372 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 CA7P43166 264 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 RPS13P62277 151 aaKnown RBP15.58■□□□□ 0.08
USB1-211ENST00000565662 ZRSR2Q15696 482 aaKnown RBP15.58■□□□□ 0.08
USB1-211ENST00000565662 MPEG1Q2M385 716 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 SPRED3Q2MJR0 410 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 OR52E8Q6IFG1 317 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 UBE3DQ7Z6J8 389 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 SLC15A4Q8N697 577 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 SLC22A8Q8TCC7 542 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 SLC2A12Q8TD20 617 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 PHF21BQ96EK2 531 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 SHCBP1LQ9BZQ2 653 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 OR51B5Q9H339 312 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 NOL11Q9H8H0 719 aaKnown RBP15.58■□□□□ 0.08
USB1-211ENST00000565662 ERVK-11Q9UQG0 969 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 CLDN16Q9Y5I7 305 aa15.58■□□□□ 0.08
USB1-211ENST00000565662 SLC19A2O60779 497 aa15.57■□□□□ 0.08
USB1-211ENST00000565662 ALOX15P16050 662 aaPredicted RBP15.57■□□□□ 0.08
USB1-211ENST00000565662 HNRNPFP52597 415 aaKnown RBP15.57■□□□□ 0.08
USB1-211ENST00000565662 SMSP52788 366 aa15.57■□□□□ 0.08
USB1-211ENST00000565662 RASA2Q15283 850 aa15.57■□□□□ 0.08
USB1-211ENST00000565662 ADNP2Q6IQ32 1131 aa15.57■□□□□ 0.08
USB1-211ENST00000565662 Q6ZPB1 254 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms