RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 PLIN3O60664 434 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 H2AFYO75367 372 aaKnown RBP13.05□□□□□ -0.32
CCND1-204ENST00000539241 STK16O75716 305 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 MYO1DO94832 1006 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 CLDN14O95500 239 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 PROCP04070 461 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 SBK3P0C264 359 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 C1GALT1C1LP0DN25 315 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 GNAZP19086 355 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 TAC1P20366 129 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 GDF5P43026 501 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 HSPA7P48741 367 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 CLCN2P51788 898 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 SLBPQ14493 270 aaKnown RBP eCLIP13.05□□□□□ -0.32
CCND1-204ENST00000539241 CDSNQ15517 529 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 PFKFB4Q16877 469 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 C18orf21Q32NC0 220 aaPredicted RBP13.05□□□□□ -0.32
CCND1-204ENST00000539241 CCDC153Q494R4 210 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 SLCO4C1Q6ZQN7 724 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 NCCRP1Q6ZVX7 275 aaPredicted RBP13.05□□□□□ -0.32
CCND1-204ENST00000539241 EXOC3L1Q86VI1 746 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 SCUBE1Q8IWY4 988 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 ARMC10Q8N2F6 343 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 PTGR2Q8N8N7 351 aaPredicted RBP13.05□□□□□ -0.32
CCND1-204ENST00000539241 POGLUT1Q8NBL1 392 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 B3GNT7Q8NFL0 401 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 AGAP11Q8TF27 550 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 CCT6BQ92526 530 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 ZBTB9Q96C00 473 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 MTFMTQ96DP5 389 aaKnown RBP13.05□□□□□ -0.32
CCND1-204ENST00000539241 FAR2Q96K12 515 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 PHF12Q96QT6 1004 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 CD244Q9BZW8 370 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 SSU72Q9NP77 194 aaKnown RBP13.05□□□□□ -0.32
CCND1-204ENST00000539241 PNO1Q9NRX1 252 aaKnown RBP13.05□□□□□ -0.32
CCND1-204ENST00000539241 MID2Q9UJV3 735 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 FBXW2Q9UKT8 454 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 KLF13Q9Y2Y9 288 aaPredicted RBP13.05□□□□□ -0.32
CCND1-204ENST00000539241 PLLPQ9Y342 182 aa13.05□□□□□ -0.32
CCND1-204ENST00000539241 TNPO3Q9Y5L0 923 aaKnown RBP13.05□□□□□ -0.32
CCND1-204ENST00000539241 A8MT66 165 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 PRRG2O14669 202 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 SPAG7O75391 227 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 ATP5F1P24539 256 aaPredicted RBP13.04□□□□□ -0.32
CCND1-204ENST00000539241 GSTM2P28161 218 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 HNRNPH1P31943 449 aaKnown RBP13.04□□□□□ -0.32
CCND1-204ENST00000539241 PTGER1P34995 402 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 MEOX1P50221 254 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 RUNX2Q13950 521 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 PCBP2Q15366 365 aaKnown RBP eCLIP13.04□□□□□ -0.325e-9■■■□□ 14.9
CCND1-204ENST00000539241 TERF2Q15554 542 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 FBXO48Q5FWF7 155 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 AGBL2Q5U5Z8 902 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 METTL2BQ6P1Q9 378 aaKnown RBP13.04□□□□□ -0.32
CCND1-204ENST00000539241 TMIGD1Q6UXZ0 262 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 FGD2Q7Z6J4 655 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 DOLPP1Q86YN1 238 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 EID3Q8N140 333 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 CYP4Z2PQ8N1L4 340 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 KRT78Q8N1N4 520 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 TMEM156Q8N614 296 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 RDH11Q8TC12 318 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 MS4A6EQ96DS6 147 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 NPLQ9BXD5 320 aaPredicted RBP13.04□□□□□ -0.32
CCND1-204ENST00000539241 TRIM8Q9BZR9 551 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 PRTFDC1Q9NRG1 225 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 DNAJC11Q9NVH1 559 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 OPTCQ9UBM4 332 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 ASB1Q9Y576 335 aa13.04□□□□□ -0.32
CCND1-204ENST00000539241 CSMD2Q7Z408 3487 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 A0A088AWK7 358 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 LRIT2A6NDA9 550 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 E9PLN8 166 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 KLRC4-KLRK1H3BQV0 150 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 C19orf84I3L1E1 186 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 K7EPI3 171 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 CLDN4O14493 209 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 TFECO14948 347 aaPredicted RBP13.03□□□□□ -0.32
CCND1-204ENST00000539241 B3GALT2O43825 422 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 TYROBPO43914 113 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 ITGA10O75578 1167 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 CREB1P16220 341 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 ZNF10P21506 573 aaPredicted RBP13.03□□□□□ -0.32
CCND1-204ENST00000539241 PPP2R1BP30154 601 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 RFC3P40938 356 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 PIK3CGP48736 1102 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 HNRNPFP52597 415 aaKnown RBP13.03□□□□□ -0.32
CCND1-204ENST00000539241 RAB38P57729 211 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 PDK4Q16654 411 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 ZYG11AQ6WRX3 759 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 C3P1Q6ZMU1 363 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 SLC22A9Q8IVM8 553 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 SULF2Q8IWU5 870 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 FAM47BQ8NA70 645 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 TCP10LQ8TDR4 215 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 PHF10Q8WUB8 498 aaKnown RBP13.03□□□□□ -0.32
CCND1-204ENST00000539241 NCLNQ969V3 563 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 ESAMQ96AP7 390 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 TLCD1Q96CP7 247 aa13.03□□□□□ -0.32
CCND1-204ENST00000539241 CCDC126Q96EE4 140 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms